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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000167_pilon:90885..97500- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_044991 ID=XLOC_044991|Name=XLOC_044991|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=6616bp|location=Sequence derived from alignment at sc0000167_pilon:90885..97500- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCGTCGACACACGTTCTCTCATTGCTCCTCCTCGTTCTTGCAGCAGT
TTTCTGCAGTGCAGACAAGAAATATACGGTTACAAAGAAAGTATATTTTG
ATATTCAAGTTGATGGCAAACCTGAAGGACGAATTGTTATGGGATTGTAT
GGTGAAACTACTCCAAAAACAGTGAAGAATTTCTATGAATTATGCACAGG
CAAGGTAAAAAAAAGTTGAGATTTTTCATTCAGCAGATACAGTGTAGACC
TAAAGCTCTAAAACAGCATCTAATAACATGAAAACCAGAATATGATTCTT
CAATGGGAATCAAAACTATAAAGTGCACTTACAAACATCAATTTGTCAGA
TCTCACAAAATTAATAACTACACTGTCATCATTGACAATAAAACAAACGA
TTTTCTGTCAAGAGCCTTGTAAACATTCCAACAACTTCCATCGAAATGAT
CAATCAAAGCTCAGTTTACCATTTTAACGCGGTCCGAAGATTGAGCCGAG
AACTCTCGCATAACGCCCGAGCTCCCGCGCGGCGCGCGCCGCGGGGATGA
AAAACTTCAATCTGTCAATCATTTTCTCAAGCGAAGTGTACGCGAAGTGA
TTCTAGCTTTACGATAGTGCCGCGGATCATCAATGGATAGTATTCAATTA
TCATTATCCCTTTATTTTCATTCCTAGAACTTTTGCAAAAAAAAGGAAAA
AATAGAAAAGTTGTATTTTTTACTGCCCTATTCACATACTGAATTTGAAA
GATCTTCTATGTGGCGTTTTTTTGCAAACTTCGAAAAACTGATTTTTGTC
CCGCCTTTGCGGGATTTTGGCTCAAGTGCTTGAGTGCAGCATAGGGTACA
AAGTCCAAATATGCGTTTCCCATAATTTTTGTATGAAGAGTTAGGTCTAT
ACTGAGATACACTCATTATTTTAACTGAAATATCAAATGAACTTTTCTCT
TCCTAGTATGTGAGTGAAGTCGGCTTCCTTTTTTGTATAACACATAAAGT
GCGTCCCAAGAAAGCATACAAATGTCAGGGATTTTTTCAAGCACTTTTCC
AGACCCGATCAATCAAACTTGTCAAACCAATCGAACAATCGAACTAAATG
AACTCCATCGAACGATTAAAGTTTGATTAAAAATTTGATAGAACTCTAAG
ATTTTTTAAAAGATTGTGAGTGTTCGATTAAGTGCGATCAATAAGTTTCG
GTTCGATCAGTTCGATAAACCAATTTTGTTCGACAAGTTTGTGCTGCTCC
GCCACCTTATAACTTCTTTTCAAAGCCAAATTCGGAATGAAAATCGGGAA
ATTACTTCCTACAACGGGTTACACACTTTTCGAAATGGCAATTGGTTGCG
TGCAAGGATAAAGTTTTTGCAAGCGGGGAAGATATGAGTATTTAATATCA
TTGAACTAATCTAAGTTTTTACTGACCGAACTAATCGAACTGCTATTGCT
TAAAAAATTGTAGGTGTTCGATTAGGTTTGATTAATTTTTTTAATCAAAC
TTTAATCATTCGATGGAGTTCGATTAGTTCGATTGTTCGATTGGTTCGAC
AAGTTCAATTGATCAGGTCTGGACTTTTTGAGCTACTACCGTTTTTGTAA
AATTAGATTGTGTTTTTGATGCGTGACAAAACGTGAGCGAAGCGAGAATT
TTTTTACTCCTAATTTGGCCCTGGATTGCTTTAAACAAGAACAAAAAGTG
TAAACATTAACGCTGCTTGAGTATAAATAGAAAGATTTTGGCCCATTTTA
CGCCGGTCCGGTCCTTTCAACGTCTGCCCTTAATCACGCCACGCACGAGC
CCTAAAATAACACCAATAAGGGCAGGCGTAAAAAGGGCCGATTAAGTAAA
TAGAAAGAGTTGTGGCAAAAGCGAAAGGAATAACAACAAATCTGTTTTTT
TTAATGAAAAAGTCTACAAAAGAATTTATAAGTAATAATGAGGATTCTCT
TAAAAATAACATAAATCTAGCTATTTTAAGTCTTTAGATTTTACTAATTA
AGTTACAATCTTTTCAACTTACTACTGTCACCAAAAAAGACATAGTTTTA
TGTATTGAGGAACAATGAATTTCTAATTTTAAGATAAAAATGTAAAGAAG
GAATAATTAAAACAGAATCTGCTTTTTAGGAAAAAATCTTCAAAAGAATA
GAAAATGTTTTCAAATAGTAAAATAGTATAAACAAAATATAAAGATGCCG
CAGGATTGATTAAGAATGGTGGGCGGTTAGGCGGCAGGCGTTCTCTAATT
CTTCAATCGGCAGTTCGGTTATTTTTAATGAAAACAAAAGTTAAAAAGGG
CACGCTATCAGTGAAAGTTATCGTGACATGTTTTATGACAGAAAGTATGA
TTGATAAACTTGGTGGAGTTATCAAAACAAATTTGTTGTCGAAGAGATTT
AACAGTTTATACCAATCGAAAACTCGTCAAAAGCTATATAGAAGACATTT
ATTTAAAACGAGTATATTTGATTTCTCAACCTAAAACTCTATATAGAAAA
TTGAAATTGTAATTCTGTATAAAATGAGGCATTTTTCAGAAATGATGTCA
TAGAAGAGTTATGGACCTTTATAACTTTTTATATTCAAATTTTTACTTAT
TGAGAATGATGTGATTTTAAGTTTACATAAAAAATGCGTCAATTGTTCAC
TTTTTCTTTTAACGTCATCATTTAGTATAAATTATTCATGGACACATCGG
GTAAGGATTTTTAAACACATTGAGCAGCATTGAGTAATTTTTCTGAGTCT
CTAAACTATAAGCTTTTCAAAATGAGTACTCAATATTTGTCCCTCAATTT
CCATATATTTCACTTTTTTTGATGCCTGTCTAAGGGTGGATGACAAGAAT
TTTTGGATAAAAAAAACCACCTAACCTCAGCGTGGCAAAGGGCAAATCCT
CAAAGACTCAATATTTGGCATTTTGACCCCCCAATTAAAATTACATTTGC
CAGGGATATAAAGGCTTTAGAAAAAAAACTCAAACCACCTAAAAATTCAT
TGATACACTTGGGGAAGGCAAAAGTTATTACTCCCAAAAAGTAAATTTTA
TAGCAAGATCTTTATTTCGGGTTTTCTTTCGATCTTTTCAAACAATTGCT
AATAAAGTTCAACGGGTTTTCCCTCTAACAAAACATTAACCAATGTGGAT
GCTTTTTCAAAGAAACACCAAAGAAAAGAAAATAGACTTTGAATCTTTTT
ACATTTGAATGTTTATATGTTTACCTTTTTTTGCGAAAGAAGAAGGGGGA
AATCTTTCTGATCTGCTGCATCTTCCTATTATTTATGCTGACGGAAAGTT
CTTTGTTGTTATGATTCGAATGTTTTCTCTTTCAAAAAGTTCTGTTCTGA
TTCAAAAAGTAAACATCATCTCTGGGGAAATCCCTCTGATTGGAATGTTT
ACTTAAGAAACTCTGCTTTATAACTCGGTTTTAATTCAATTTTTAATTTT
ATCCATGAATTTGAGCTTTTAAATGTCTTTTTATTTTCTATTTTGCGTTA
TTGTCAAGATTTAGTAGTTTTTGCTGCCTTTTTATGAGATTTTACAGGTG
AAATTCTACTTTTATTTTTATTTTTTTCGCCGACCTACCATCAATTGCTC
TAACTTGGGACGATTGGTGTCGAAACATGGGATTGTTGATATCTGGCCTG
TATTTTCACTTACTGTTGAATCACTTTGACAACAAATTTGTTTTGATACT
TCCAACCAAGTTTATCAATTAAACTTTTTCAATCCCGCAATCAGAACCAA
ATGTTTTTATAAAGCATTTTAAAAGTATATAATTTGAAGAAGTACCTACC
TCTTTGTGCCTCTTTGTGGCTTTTGCTTGAACAGCTCATCCAACTTGTTG
AATTCGCTGCTTCGACATTTCCTAGAGGCTGTTGGACTCAGCTTGCCTGT
CTTGCTGTATATTTCGTACATTCAGATTGGTAGTGATCATTGAGATCATT
TTTGTCTGAAAATTGTCTAAGATTTTCAGAAAATCCAATGATTGTTGTGT
GTTTGTATGGTTCTTTAGTACTGGGTCCCTTTTAGTCCCCTTGACATATG
AGAAAAGTGCAACTTGTTAAAACATTCACCTTTTCTGATCAATGAAAAAC
ATACGTGGATGAAACATGTTCAAACTTTACAGCCTTTTAGCCTTTTGGGG
ATTTATTACCATGTCTCAGTAACTTGGTACAGATTTTTGGATGCTTCAAT
TGGCAATCTTTGCTTGTCATGCTATATTTACATTTTCCTTTCTTGTAAAA
GCTACAAACTGGAGTTTAATCAGAGACTTTGTCCTTGGTTGCAGTATTAT
CAGAGGATAAGGTTTTGTAAATCGCCGTTGAAATTTGGATTTTAGGTAAT
TAGTCCTTCCCAGGTATATTCCATCAATCTTATTTGAGGATCTGTCGATA
ATAATATCTGGGACGATTGGAATGTGAGGAAGTGTCCTTCTTGGAGTGAG
TTGGGTTCCATTTAAGAAAGATTCAGTCGCTTCAACAGCTTCAGTGATCT
GCGTAGGTGAATTCGTTATTTGAGACTAAAATCCTCTCAACAATGAAATC
TTGTGAGAAAAGGGCTGGTAAACAAATATTGATGTCTGTTTAAAGAGAAT
CTTGGAACCTTTTATGGAATTTCTGTGTATAAATTGCAAGTTTTTCTCTA
AATCACATTTCTTTGGACATTCAGTCTACTAGTCTTTCTCAAATTTGACA
ATTTATTCCTTAAATCTGACAAAAGGTTTTGTTTTCGAATAAAATTCAGA
ATTGTTACAAATTGATGAATAGATGTGTTTTTGGTGTTTTTAGTTAATTT
TTCATGCTATTAACGGCACAGCATTTTTTCAATGGCACAGTATTTTTCAT
AGATTGGTCCAAACAACGGATTAGAATAGGTGGATTAAGAACTCATAGAA
AACACTCCTCGTTAGGTTATCAAACTTTTTTACGAGTTTGCTAGCAATTA
AAACTTGATAAGTTGTAAAAAAGTTGTAAAAAATCATTACTTTCAACATT
TTCATTGGTCATTACGTATCACGTGGTACATTTTAAATAAGAAAATGCAC
TTTTTTAGCCCTTTCTATCCAATGCAGAAATTAGCCAAATAATTTGAAAT
TTATTTTCCTAATTCTAAATACAGTCTTCTTTCACCAGTATGCAACCCAT
TCGTGACCCATCGATAGTTTCTTAGTTATAGACCATACGTTAATTTTCAC
TTATCTGAAGATTGCCATTGACAAAAGATTAAAAATTTACATTAAAACTG
GTCTAGCGTTTGTTGATGCTAAAACTTAAGTGCAGGATTTAAAATATTTG
CAAAATCATCAAAATTGATCGAATCATAGGACAAATTCGTTTTCGAAACT
GTATAAATTGGAAAATTGTTCTTATAAAAACAATGAAAAAACTAAACGAG
GAGTGCGCAGAGTCATTTACAGATTTTTCTTGTAACAATGAGAAGACAAT
GGATCTCTCTTGGGAGCAACGAGAGAAGTTAATCCACCTATTCTAATCCG
TTGGTCCAAACAATTTTTTATCACCAAGCATTACTTTTTCACCTTAGAAT
GGTTATGGATACAAAGGCAGCAAATTTCACCGTATCATTCGTGATTTCAT
GATGCAAGGAGGAGATTTTACAAATGGTGATGGAACTGGTAAGGCTACAA
ATACATTTAATACATTTTTTTGAAGATTTATAATGTAATAAGTTCCTAAC
TTAGAATGCAGCATTTTTCAGGGGGCTAAGAAAATACCTCCCCCGGCTAA
ATTTTGAAAACGTAGCTCCTACCTTTACAAAGCAAAATATTAAATAAATT
TGCATGTAAAGCAACAGTTTTTATATTCTACAGTTCAATGAATTGTTCTA
AATGTTTTTTTATTGCGAACAATTAATTTAAAAAGATAGAAATCAAAATT
GTTTATCCTTTTTCCAGGTGGTAAAAGCATCTACGGGGAACGTTTCCCAG
ATGAGAACTTTGACCTCAAACACACAGCACCAGGACTTCTTTCGATGGCC
AATGCCGGACCAGACACTAACGGATCACAATTTTTCCTCACGTACGTCTC
AACTCCATGGTTAGATGGTCGACACACTGTCTTCGGAGCTGTCTTGGAAG
GAATGGTATGTATTAAACAATTTTTAGCTCTCATGCCTTGCAGTAACGTC
TTAGATCTGACGCTATTTTTACCATAATTTTTATTGGGTCATTTTCAAAT
GATGGTGTAAGCAAGACTTCTTTTAAGAGTTAGCCATTCTAAAACAAATC
TTGAAGTGAAAAACGCTGACTATACTTTTAAAAGGGAGATAGTGAGAAAG
TAAAGGAGTAGAGGGGTTGGATTATTTTGACAAGTTTTTCGTGAGTTTGT
ACCATGAAACTTATTATATTCTACAGATTTCAATTTTTTTAAGTTTGGGA
AAAATTTCTTTTCGAGAATTGGATTTCGTCTTTATTTAATTATTTTTGAG
AGTTGAATAAATTACCAAAAACCTTCTTTTTTAGGACATCGCCCGTAAAA
TCGAGAAACTTTCAACTGATCGACGTGATAAACCAACGAAGGACGTCGTG
ATCACTGACTCTGGTTCGTTAGAAGTCGCTGCACCTTTCGTTCATATCCC
AAAAAACGACATTTAA Coding sequence (CDS) from alignment at sc0000167_pilon:90885..97500- >XLOC_044991 ID=XLOC_044991|Name=XLOC_044991|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1230bp|location=Sequence derived from alignment at sc0000167_pilon:90885..97500- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCGTCGACACACGTTCTCTCATTGCTCCTCCTCGTTCTTGCAGCAGT
TTTCTGCAGTGCAGACAAGAAATATACGGTTACAAAGAAAGTATATTTTG
ATATTCAAGTTGATGGCAAACCTGAAGGACGAATTGTTATGGGATTGTAT
GGTGAAACTACTCCAAAAACAGTGAAGAATTTCTATGAATTATGCACAGG
CAAGATGGCGTCGACACACGTTCTCTCATTGCTCCTCCTCGTTCTTGCAG
CAGTTTTCTGCAGTGCAGACAAGAAATATACGGTTACAAAGAAAGTATAT
TTTGATATTCAAGTTGATGGCAAACCTGAAGGACGAATTGTTATGGGATT
GTATGGTGAAACTACTCCAAAAACAGTGAAGAATTTCTATGAATTATGCA
CAGGCAAGAATGGTTATGGATACAAAGGCAGCAAATTTCACCGTATCATT
CGTGATTTCATGATGCAAGGAGGAGATTTTACAAATGGTGATGGAACTGA
ATGGTTATGGATACAAAGGCAGCAAATTTCACCGTATCATTCGTGATTTC
ATGATGCAAGGAGGAGATTTTACAAATGGTGATGGAACTGGTGGTAAAAG
CATCTACGGGGAACGTTTCCCAGATGAGAACTTTGACCTCAAACACACAG
CACCAGGACTTCTTTCGATGGCCAATGCCGGACCAGACACTAACGGATCA
CAATTTTTCCTCACGTACGTCTCAACTCCATGGTTAGATGGTCGACACAC
TGTCTTCGGAGCTGTCTTGGAAGGAATGGTGGTAAAAGCATCTACGGGGA
ACGTTTCCCAGATGAGAACTTTGACCTCAAACACACAGCACCAGGACTTC
TTTCGATGGCCAATGCCGGACCAGACACTAACGGATCACAATTTTTCCTC
ACGTACGTCTCAACTCCATGGTTAGATGGTCGACACACTGTCTTCGGAGC
TGTCTTGGAAGGAATGGACATCGCCCGTAAAATCGAGAAACTTTCAACTG
ATCGACGTGATAAACCAACGAAGGACGTCGTGATCACTGACTCTGGTTCG
TTAGAAGTCGCTGCACCTTTCGTTCATATCCCAAAAAACGACATTTAAGA
CATCGCCCGTAAAATCGAGAAACTTTCAACTGATCGACGTGATAAACCAA
CGAAGGACGTCGTGATCACTGACTCTGGTTCGTTAGAAGTCGCTGCACCT
TTCGTTCATATCCCAAAAAACGACATTTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000167_pilon | genome | sc0000167_pilon:90885..97500 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 484-615:133 |
| Aaloc | 298-483:698 |
| Aaloc | 205-294:1070 |
| Aaloc | 1-204:6617 |
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