XLOC_044990 (mRNA) -

Overview
NameXLOC_044990
Unique NameXLOC_044990
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000278_pilon:376043..393375+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_044990 ID=XLOC_044990|Name=XLOC_044990|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=17333bp|location=Sequence derived from alignment at sc0000278_pilon:376043..393375+ (Clytia hemisphaerica_ch_hm2_pilon)
GCACAAactgctgatataaacaaagtaagtatagtagtagtagtaatagt actatgtagtagtaTAATTTGATGATTCAAAAGTCCTTTTCTTACTTAAA AGTCAGGTtgataattttttgattgaGGTCTGAATCactatgaaaaaata ttgagtCTGCaaaaaaaCATTGTAATTTTGAAACTCAAAGCAGAAACTTA AAATCATTGCTTGCTCACTGTTAAGAATCACTGATCTCCAACTTCTTGAC CGGATCAGGCTTCCTATACAAAGAAGTGAGTCCAATTAAAGGGCTGACTA GTCCGCCATCAAAATAGAATACAGCTATTTTGATTGTCAACAgcaagatt cgaatgttttgaaattcgatggCTCGAAAATCTAGTGTAAAACAGAAAAC GACATGGCtgactattcatgatatgcaccactgcaatgtcttctgacatt acatcacggaaccaacagctgattggtcgtaagtgacgtaaaatcagtca atacgtcactttcaaccaatcagctatgaATAGTCGACTTTTTTCTGAAC ACACTTTCACGGGAGATCTGTAAGCAGTTTAgcctatctagtgtgtaaag GAATATGATATTTGTGTTAAGAATGCATGTATATCAAATCCTCCTTTATT AGAAATCAAACTGGTTCAATTTATTGAACTCAAAGTACAGCAACTTAAAA CCGCGAATCAAATTATCCTTGAATATTGAAGATGATAAAGTCAAAGAGAA AAACTCACCATCAAACAGTAAGAATCTTatagaatttttcatattttgtt attttttcaaaacatgaaaTGCAATGATCAAAATAACAACACTCTTTAAA ACTAACTAAGGGCCAAAATATTGGGAATATTTGATATTAGCCTTATAGCT TGGTTTTCACCGTCTAACACATGTGAGGTTAGTCAGTGATCCAAAAATAA CCttcattttattagttttttattCCAGGAAAAAATCCATAGGTTTCTAt actaaaatgtttttttttcagaaagcaAGCCAAAATTTCAATTCGGAACA CCTGAAAAGCAGAAATCACCATCCGCCAACACTGGGAAATCACCACCTGT CAATACTGATGATAGTTTCGAGATCGTTTTGGATGACGAGCAAGGGTATT ACCTGATGGGACCAGAAACATCTGATTGCCAGACTTATGTGTTGTCAGTT GCTATCAATGGAGTTAAAAATCTTGTCAGTGTAAGGTTTCTAATCTTATG AAAAAACACCCGCTTTATTGACTTCTGTCATTCATTGCATTCTATATATC AAGCCTTATATTTCATTCAAATAATGCCTAGGACTAACACTACGATTCCT TGGTAATACGGAATAACACGAAAttaagattttgtttttgataaatatca AAAAAGTTACTGTAACATACAAAGgtcaaaatctttcattttcttatttc GAAACAtgtcgtcgcatcaaaataagaaagccttaagtccattttttcaa aaattgagttatgaccataccgatgctttacaccccattttttatcgaat ttttggcttaaatccatcaaaaaccaacctaaagtggcctaattttaagt tttttgaaaaataagaatttttatttttgaaattttctcaagttaagaaa gtcttaagtccattgtcattttagttggactttaggaccttttagattaa ggttttagttaaagagttcaaaaaagttaagaaagttttaaagcaagaaa gttagtCCCTTGGAGTTAAGACACTTTTtcactggaaatttttcaaattt tcagttttaatcaaggaaatttacatagaaaaaaaggtttaagtccattc tcgaaaaacatgctatgaagaagcattcatatctccgcaatggtataagt gacaatgttgatactttagaatttgaaagatctttcttcatttatattca tatcaaaaaagcagctagctagcccaacatggtcaaaaatggcagccatt tcaaacctttaaacttgattttctcaaaactacaaaaatggacttaaggc tttcttatttcGATGCGACGATGtatgttttctttataagaacatcgtaT ATTTATTGAAGCATTTTttgatgctcttaactttttgtgttaaaaagaat ataattcaaaatattcataATTTCATCATTCATTAATTTCGCCAGAATAT TTTTGTgccatttcttaagaaattgggtgtttgcGAGTTCATAAAGTTTA GAAGAAAATGCTTAAACTTGTTGTTTTGGTCATCGAAAccttctgatgtt cttatataatttattcttataaagaacgtGTCCAGATTGATTTAGAATAA ACGTATCGCACTTTTTCCTTTTTAGCTTATACCATCGACGTCGGCCATTA GTTCTGAGAATGGATTCTATTTCTATTATTCACTTCTTGATAATGACGTC ACTAACGAAACGTTCTATGAGTTGATGACACCTTCTATTCCTACAGAAAG AGCGAGTGTTCGTATTTCCACAACTTTTCGAAGATTGGATGTTTATCTTA AACGAAAACAAACACTAAAGGTAATTAGAGAAATATTCAATCACTTCTTC CATACATTAACAAGCTCTACGGGAGTATATTACATAAAGAGCACTTTTGA TTGTGCAGAGAATCACTTTGTAAATAATTAAAATGCTTGTTTTACTATTG TTCGTCATAAAGTTAAGCGTGGAATTGATTTATAACATTGGTCCATAAGT TGACATAATTGAATATGGTATATTCCTCATGTATTAtggtcaaaaaaatt ctaacatTCAGGTTTAATATTGTTGGTCAATATTTCTAAATTCCACGAAA CAAGAATAttctcatgatttaaAAAATCACCTATAGAATTGGTGTTTTTG GGGCAAAATAAGcaatattgtaaacaaaaattcctaattccgcgaaaatt tcttaaGTATTTGGTAGTaagtttttgcttattttcagGTTTTCTTTTGT TGCGGAGACGATACGTTAGGAGAGGCATGGATCCCTCTTGATAAATTAAG TGACACAAATAATAACAATCTCTTACCCTCTATGACCAATGGCATGTTCC CATTGCGCAGTTCAAAGAATGATCATCGGTCATTGGCGTGCGTGGGCGTC AGTGTGGTCCTGAGGCGTGAAGATCAACCGGCACCCGTTGTTGCGACGGA CCCAGGGTTGAGCCCGGTTGAAAAGTTGGCTGATAAAAAGGTTTGAAAGT TATTCATTACGAATCTGTCTAGCGTAATACTAGACGTCGTCGCGTTGCGA ACGTATGGTAAGAGCGTTGCTTGCGTATAAAAACCTCTCTTATACAAAGG TGGGCTATACAGTGTGCCGCAAAAAATATGGACAAATTTCTTTATGGAGC AAAATCGGCATATATTAGAAATCACTATTTAATTTATGggttgataaaat ttttacaaattgtATTTACAGTAGGGAATATGGGTAATTAACCGAATCAG TAAAGAAATTGTTTACGAACTAAAAGTTACATCATAGTAGGGCTTAGCTT CCAAGTATGATGTAAAAATCGCAACCCCTATATTTTTtagacctaccccg gtggaggtcctttataAATTATAACCTGTGTCcttctgtccgtccgtccg tccgtctgatGCAAGCTTTACTTGGCAAGTTTTACTGTGTTAGTCctctt tgagattgagattgtcCTTGTTTCATGTAGAAGAATGGTCAATATTTTCA TAATGATaaaaaggccaatctcaaaAGCAGAACAGAATTGCAAGATTTCA AATCttccaagacacttattttgaaattaaaccTTTAGTCGTGTAGACGA CGATATTTAGTAAACTGAATTCAAGATCTGAATGTTTTATTTCGTTCTTA GGCCGTATCACCAGACACCATTACACCCACCGCCTCTCCACGTTTGGTGC ACTCACCGCCACCACCGTCTTCCCCGCCCCAACAGCGAAcgccaaagaaa aatcaaaatcaaaattccagAGTAAAAACAAGGGTATTcaaattgttatt gttttaacACAGGTTATCATACTTTAATAAGATGAATTTTCAAGAATAAG ctcttttcgaatttttggacTTGAtgctttttttaagaatggtgtttttt ccaattcattgtgaatattcttaatttttggggaAGAAAATTgctcctga aatattcttacggtattaaATTGTAATACATATGTAATACATATCTGAAG AAGAGATTTTGCACTTTTGTAGACtcttttagcattgctggggaGTATCT CATTGGTAATTTGATgataaaatgctctaaaaatggcattcttaggttca gttgtcagattccatgatggtgatattcttaccatattgttaactttttg gccaatttcttcataaaatattcttatgaaGTATATTGGTgggggcgtac gaggttttgaattaccgccatcccggccatttttttgaaaatcaccgtta tcccgtccaaatttttcgaaaataccggtcccgctgtttttcccataaaa ttctAAGGACTAGAAGTCAAAAATTCGGCAAAATGGAATAGAATGTGTAT GAGGTCGAtcactatttttgtattttgtttcgattgcAaaatttcagcct aatcagacaattttagaagtttctagtctgcctcaaagtttagcctcgtt ttgaggctaaaacttgtgaccacgcccaaagaaatcaaaactttaaaaaa atgaaaaaaaccacagatatctgtaaagccggAAGGGCTAGATCTGCGGC CTGGatcaaaaaagtgaagctcattcTTGTTTGTCTCATCCTTGTTTGGG CTTTGGTAGGatttcctaccaaagtcacctGACTAAAATcatgcaatttc actggtttgagagatgcaaaatagcgtttgccgcctactatTCTTGATCT CGCACTCCGAGAACAATGAAAATGCTAGATCTATCACCTAGAAATTCAat caagtcacaaaatcgtgcttcattttttttgctggataAAGGTTAAAGCT GCTAGCCCTTTGGGCTATgataaatcattgaataaaagaaacaccccagg gatttgcccaaggaacaagaacaagcgtgcaaaatttcagccgacAATTC GACCATTTTTGTAGACTCCAGCCTACCCCAAAGTTTCGAGGTGACAGATA GGACAAGCTGAtcgaattcgaaaaaaaacattcaaaaattcgaATCTTTG TCTGGTTTATCCTAGGCTACGGTCATATCTCCTGCGCTCCGGacgtaaaa tttcttctcttcgAAGAGAAGCTCAAGTGCAACAAaggagatatgacgta gcctagtttCTCCGcgaacaaaacattttcataggAACCGGGCTTTATAA AGCCCCGTGAACATCTGCATTAACGTTTCAAATaaggttttttatgaaat gtaagatccttatttttttgggtgtttttcgcgttttttcacctttgctg actcctgtgacaagcttttttatagtccgaaaattttatgtacaCCGTCT ACGTATGgcttttaccgaaataccgttgttctttataagaattacctcat cccagacgaaaaatcaggtgttttaccgtcaccgtggctcttgcaaaata ccgtttcccgaacactttttatcgtttttaccgcttcccggccctaaatt aggccttatcccgaataccgccagatcgtacgccccccactatattctta taataaaagaaaaagcgtgtaaatgTATTAATTCCACTCTAGCAATCACC AGAGAAGTCGAAGAATAGAAAAGAGAGGAAAGAGCATCATTTTGTGTGCT CTGTTGATTTGAGAAGTATTGGACATATGGACATCCCTCAACCAGTACAC TGTTTTTGCCGGTGAGTTCCGCCCTGATTTGTGCCAAAgttccttttttc tttgtctCTTCTTTAAAATATCCAGCTAAAACCTCAAAATCATGTTCTCT CAGGTCCCGAATAAACGGTTATTAATTTTCGGACCCCTCCCCcttttatc agattttaaaagattttattcaGGACCTTGGAGTATCGGTCATATCTCTC GATATAGTCATCCTAATGTCTTCATATTTGCAATAGTTTTACCCTTGCTC ACTCATGGGATATACGTCCACATTTTATAGCGAACAGATTATAATCCAAT AGCGAgctgtattttcacttttgagAACAACACCCAGTTTTATCCCACAA AATCGAGAacagtaaaagtgctgatttaccgtcgttctCATTCGATCAGG ATCTAAACAAATCATCAAGCTAACCATCTCCGCAGAATAAATACATACAT AAACATTTTAATGTTTCTCTTTGTTTCAGATACTCGTACCCATTCTTCGG AAGCTCGTCACCAGTCCTCACCAACCCACCTGTATATCTTCAACGTAATT GTGAAGTTGTTTTACCGCAATCTTTCTGTCAATTCGAATTCGCATCTCAC ATGGAAACTGTACAAAGCACATTAGCAAGGTAACTGCAATAAatttcata atatttgagaaaaaaggaaaattcctacgaaatcttataaccacaaacga tttggaagtccTCTagattaggttggaagggtagagttttaactctgagt tttaacgctagacttaagagcTTAGGATCTCGTGATTCTAATCCaaattg aaatactcgaataaatttatcatctcgcccgaactttaaattgctagaAA CGAGGAAcgaaccaaaattctcaatatattttgactgaGAATGTACAGTg gagtttctttaactcgaacctttgTAACTTTAGTGTCTCctctaactcga acaaattttctctTCCCTTTTGTTAACAATGTCACATAAAATGCGTTGTA TATAACcataattcaaacaaatttgCGTTCGCTGTGCGTGTTATCCAGAC TCCAAACCTGATTCTTTCTTAAATAATTCGAGGGAAGCcttttattttct gatttttaagttttcagcTCTTCGATTTGATATTTGCGAGTCCAGACTCT AAGTAGAagtaaatatgagaaaaaataGTTTGTTATACTTAGAGCGAAAG ATGATTTATTTATAATTCTCTGATAAAAATTACTCCACCCAACGACCTTC GATTTTGAAACTCTGACAAAAACGTAACCAAAGGCTCTTCCATAGCTCAG GAAAAATAGAGTAAACCACCTGGAtgggaaaaaataatttcacacCTTTG AACTTAAGTTATTTTCCCACCCAGGGGGttttttttGCACGTTCAAAAGG TGTGAAATGTGCTTTTCCTACCCAGGTGATCTGCTTATTTTTTcatgtgt acacgttttttttatagaacatcctaaatttttgaagccttcggatgttc ttaactttttgagttttaagcctaaaaatgttcttaaaaacatgttcttt attttcgccattttttgagtgtttttccattttctaaagaaattgagtgt tcTAGTGccttcaaagccttaaaatgttcttaacttgttctaacAATTTG GCcctcgaagccttattttcttacatagtttgttcttataaaaaaaacgt gtaccttatTTGTACCGTTTTTGTGTAGAGTGCCATTAGTCATCGAAGTG TGGAGTAGAAGCCAAAATCACAAAGATGAGCTCATTGGTATTTGTCATGT ACAACTGTCTAACATTTTCGCATCGTCAAATTTTCAGGTATGTTGTCGGT AAAAAGTAATAGctttgttttatttcaaaaggtattttcagaaatgaaaa tttgaccgAAAGTTTGATTTTCAGGTGGGCCTAATGCCTCAGTTTTTCTC CAAATACCTTCACATTTTATACCAATCGACGCAAAATTCACGTAGATTTC AACGATACAAAAGTTTCTGCAACACAAGTTGTGGCCTTTAGAAATACTAC CGGTGTTTCGACCCATGTactacgagtatactcgtaGCTGGCAGCAAACT TGTtaaaaccatgaacatataagcgactggacatccatctcctttgtatt tttgaagataacactgctagcttcgttgccgcctcgttaaaatcatcaaa tgaaacaataaattctgatggtatacctcttgggaataccttgctaacaa cgtcaaaatttcgacaaaagtctctgttgttctacttttctcaagtcttt tatctatatcataacaaagataacagaggcaaaatcatcgtcagcttgtc aaaactccgactaatatttccaaattttgacttaaaagtgtctaataatt ttagagagtgtcacattctaatttcgatattcttatgacacaggctctca actttggcaagctatttttttcaagtcataaaaaaaattattggagtgac aaaagggattcaaaagtatacacgcagttgaaattctgcatttcagagtt gaaaatgttgataaaatatattgcaaactcgtgaaaaaaaaaagtaaata atttttttgtgcattaggagtaatgttcaagctctatcaatcattttacc taaacaattcaaagaaagaaaattacgacggaatattgtcggatttttta taccaattttgaaatacaggcggcaacgaagctcgcttcaaagagacaat aaaagatagatgtccagtcgtttatatgttcatgttaaAACCAAACAATT GTCTTTTTATCTGTCCAAGTCAAGTAGATTTTTTCCCAACAAAACATGTT CTTGTATTTACATTTTTGTAGGAGCGATCCGGACCAGTGGTTTGCAGTGA AAAAGTCCCCATCGTCAGCAGTAATAGGTACATCTTGTTTTCAACTCAAA TAGTTAGAGTAAAattaatctcataacagatcgtCCGTTATCCTCACACC ATGTTCTGCTTTAAAGGGGTGTGGCGAAGTAGTATAAGAATCTACTCTGA GTTTACAGTAGAGTTAGTGTTATGTGACGCCCGTCCGTTTCAGCTTGATC CTTTTTCTGACATATTACTTTTTTATTAGTATCTTTTTTATGATGACTGG CTTCTCCTTACAGTGGATGCTTTGTTCTATATTAGACGGTTCTATATTAG TAGTCTCGCAAGAACCGTCTTACGCTGTAGTTTATACTGCCTGTCAGCTT GTGAGATACTGACACACAGTTTTATGGATCAAGTGTGTTAATATGGCGTG AACAAGACCAGAGCACTCTCACTTTATTCAAGGTGCGTTGGAATCGATAC CTGACACAGTCACCGACAGTCTCCTTGAGTATCTGTCTACACAATTTCCC TCACATAGCTTGGGTTTTGCCCATGCGAATCATGCATTATTCCTTTGTAA GAAactattttgtttcattttcattcataGACCCGGCCTAAAGATGGGTG TTATTCACGTGGTGTTTAGTTTTGAAGATAGAGGAGAAATCAATAACATC AAATTCTCGCCGCGACGAGATCAGGTAAAGTAATACTCTTTCTATACCAG AACATTTTTGGCAAAACATGTGCTTAGGATTTTAAGAATTGCATAAGACA AGGCTTTTTTCAGGCTCCTTTTAAGGCTACAACTACAACAaaaaaggaac attttaagaacattccagCCTGAAATCATAATAAATAACAACCGGCTTTT CGGTAAAAACTTACTTACATATACTCTCATCGCATTTTGTGAATCTCATG TATTTTCCTACTTTTCGCTAGTCATGTTAGATACTTTGATGTACGTTGTT AACACAAAATCCCAAGACATTCTTGCTCGTTTGACctgaatggaattttt tttgccaattgaaaatataaaataaaaaaaccacGGGACAGCAGTGAACC TCTTGAATATCCTCCTTCAGTCCTGAATAACTATGCATTTTAAGAAGGGT ATATTATTTTCTCTCTGTCCAAGACCGACCTATATCTAAATTGCCTTTGT TATTCAAAGACTTCACAATCAACAGACGATACACCATCATACAATCCACC CGCACCGCCCGCCAATCAACGTCAACACCAAGAAGATGAGGGGCGGAGGG CGAAGGAATACGAAGTAGCAATGGCGTTAGAATTGTGGCGGCAGCAAcaa gaagaacattttttgaatcaGGTGAATTATTCAACACCTCCAACGTTCCT TGATCGAtttttttCTAATAAGGAAATGACTTAATATTTGCTTTCGTGAG ATTGTCAAGACTTTTAGCTGAAATCTCAAAGTTGTCTTTTAAGGTTTCTC TTTTTGGGCCACATGAAGGAAAATTTTCGAGGATTGTCTCTCTGagggtt ttttcttttttgtattagcgagtttatgtattcgagataaatcgatgGAG ACGGTATAAAACACAGTTGATATATCGCAAAAATCGCCGTCCAATTTGCT CAaagacggtaaaaacaccaaaataccgtcgtctgttaaGGTGAGCGAAG GCGATATAGATCCATACCTCAattatcgactttgttttgcgtcgACTTCA CTTATCGTCGCCCttgatatcctccgatacataaactcgctattgtctCT GTAAGTAtgtcttttttgcaaaaattcagTCTCCATAAGGGtgtcttttt cacaaaaattcagtccctgtaagggttggTTTCTAGAGGTCCGATATCCG CACATACCAGACATTCTTTAACccaagtaaCccccccccccttgacaATG AAGCTAATTAAATAGGGGTGGAATGCTTGGGATCCATCAACAAAAAAGGA AATTATACCGTTAAACCATATCTTTCTTTTACCAGTTGAAAGCGAGAGAA AAAGAACGAATGAAAGCGTTGGCCGATGAATGGAAACAAAGAGATCTGGA GAGAGAGAAacttttggcgcgaaaaattcaagaatttaACCTGTTGGAAA ATACCTTGAAAACTGTAAGTTGCGTTTAATCGTCCAAATGAAATAAtcag ttgaaatattttttaagataaCATAAAATTTGGGAGTTAAGCAGGAGGAA GAAGAAGGCTCAACATTTTAAGCAACTGGGTTTTTGATTCTAATTTCGTC ATCCTtatttagagataggaataattggaaggtcggaatcgctgattgaa actaattttctttgcttagcaaaTAGTCGAggagtccatcagtgattctg accaaTCTCTAAAGAGGGATGTTGAGATTagatttctttcatttctttct cTGAATAGGTTGATTTTCGATTTATGGCTCGGTCATACTCTGTTTCTTCG CAATCTTTTACCCTCGGTATATATGTCCGACCCCATTTCATTCCAGGCAG CTTGAAAATATCTTAATTTTTCTGCACATTTTAGTCTTTAAGTGAGCTTC AATTGAAACAACGGCAAGTGAACGAGGAAGAGCAGCTGTTAGAGAAGAAG AAAGCTCACCTAGCGGACGAATTTGACCGAAAGGTGTGCGAGATGAGAGA AGCTTCAAAGCGGCTCAAAGAAGAATACCAACATCAACTTCAAATcgaga aaaataaacagaaagaagttGAAGAGAGGTAAGCTACTAGTCTAAATACA TCTGGTGTGATTTGTAGAATATTGTTGTTTTGTCGAAATATCTTTACACT atcttaaaataaaactttcaatttcCGGAACCCTGTTTTTgctagactag caagcgtctgtctttccttggacacgggaacgcgggaatagtgcttataa taaagagttcttatgaaaaatagaaattgccgcgggagattGGATTGGAA AGACAGACTAGTTCCAAGTGGCGCAAAACGGGATTTTGCTTCAATCTAAT CTCAGGCAACGTTCCCTCGAAAAAGAGGGAAGATAAAATGAATGGACAcg gcttattttttcttctattctcATCGCAATATTTGAGTTTCTCGGAGTTA TGGATGAGaaaaaagatataaacacaaaaacagaaaaacgtGGCGAGGAC TTCGGAGCGGACTTTTTTGCTAGAGAAATTTTTTAatgcttttaaatgtt tataaacaCAGATTTAACCTGTCTTGGCATTCTCTATCTGTGATACTTTT TCCATACATTGTTTCTGGCTTGGTTGGGACGTTGATTtattcacaaaaac aaacaaactcgTATCtgcatatactttcactttttcatgtgATTGTtgtg attgaaagattttttgattatgCATGGTTATAAACATTCATGACATCTTT TAACACTGggatctttgaaattttgtcagCTTGGTACGTTGGTAAATCTA TAGTACAAGTGCAATATTTATGACATTATGACACAGCTGAGATTCCATGA CTGCATGCAGAATACTATTTGCAGGGAATGTTCAATATGTTAATATGCTC ACATTCATTGGGTAACAGATCACTGCTTTTTTCTATGGGTACAAGTTAAA CCTGATAACCTTATCCCAGAGAATGTAACTCCGAAATGGCTGcagaaatc ctcaaaaattaagatggaaagtatggtatttatataacatttttggtGGT GCAATATGGTGTGGAAATGATGAAAAGTGAAGtgataatttggaatttaa aatTGAATGCTTCTTTTTACGTGGAAACAATATTCTGACAAGCTGACCAC TGAGACACATCTTGGTTCTATTTGtgaatgaaaataacaacattttacaT TGAGATGACTGGTTTCCTGGGCTTTCGGATGCCCGTCGTTTAGATGGATT TCACTACCTTTGACTCTAAATGGTAGATGTACGAGGATGTTTTGGGTTTT CACTACTGGCAGACTTCCAGGGGgagcacttaggcaaaattaagTACGGG GACATGCCGTTGaccagggtccctttttcagacTCTTGAAATATCTGATA TGGTcccaaaattttataattttcaagatgtagACAATTTTTAGGgtgga aatttaaaaatatttgaatttttcgtctactttaagTCACTTTTGCCAAT TTACAGGGTTAAagtgggaaaatattttgatttttttcgatCGAATCATT TTTAgttctgaaagggtcccaaatttaccaaacattcatatctcacaggg tccacttttcaaactccagcgtgGCACGTCCCGGTTATTCGCCAAGGTTC CCCGGCAGACTTCTACCTTGTAATTTTGTGTTGTCCCCTGGTGTTGTTGA ACAAGTTCAGACTGAAATTTATACGTGAAAGTCTTTCAAACCtacagttt gaaaattttcgattggatttttgccaatttaaaaaaatctacttgGATTT GGAAGTAATTTTATGTAGGTACTTTATATAATTGTTATAGCAAAATTGAA GGTCGATATGAACAAATAcatataattttatgttttgtaaaagttgttgc ttttttgaaaacatttttctttttggcttctacaaaaaaaaagttttctt atacCTGCAGTGGCCtgatcttttatatttttgatgccgtttttctaaaa aatgttcatctttttcatttgaaaaagatttttccccttatatgaatatt tttgttttggggTACCTAGCTGGTAGGTACAGTCCAGTTCATATTCTTTT CATTCACAAAAATATCATACTTTTTGTGAATAGTTTTAACTCCTTGTCTT GTTGTTGGTATCTTATTAGTGCATTTATGCATGAATTATGGAAGAaagaa ctttaaattttttcaaaaaaaagcttCTAAATTGACTGATATTCCATTGT ACATTGtactcaccttcttttataatacattaaaatcaaaaaataatgag gatgtgagtttgttttgatttgagtgaattgaatttagtttaaaaaaaaa ataataataataataataaagcataaaaaGCACAGAGTTTTGTCTTACTT TTTTATTCCAATCCGCGAGAGTGAGTGCGCTGTTTTTAGTGAGCACTCCG TCGCGGTATAAAAAGCACTCCACCGTTTATTTAGTAAATAGCGCATTTTG GAACTAGTcgttgtattcagtgaacatatagaaaaatagatcctattgca agtttaatctgcagcgaaatacaacgacgtggtttactagtctatgtTTT TGCTAATGGGATTGACCAAGATAAATATTGTACtaacatactctcgggta cctaatagccgccgcccccccccccccccccccccccccccgcttattca tttttgggaaaatgtttttgaaagttcccttttttgtcttaattctgctg tattagcctccttttcaaacattttccacccaggacatttttattccaac cctccccccccccccccccccgcttattaaattttaaaattttttccaac cccctgcttattccaaccccccccccccggctattaggtacccgagagta tgcaACGATACTAAGGCAGATTTACCATTTTCCAATACGAGGGAGGGGGG TAGAAAAAAGTTTGATATCAGACTATTAAAGGATTGCTGTGGACTTTTCG TTTAACAGCGCAAAATAATCATCAAAGTCGGTACATCAAAGCTCGACCCT GTAAATTTATCGTTTATTTAGATATCAGCGTATGGTGGAGCATTCTCAAG AGCTCGAACGGAAAGTTAAAGAAAAAGACAACGAAATTTATGCGCTCAAA GAGAGTCTCGTTAAACGACCTGAAGTCAAAATGCAATCAGACATGAATAT ATTACTCATTGAAAAGGTTGGTTGATGCATTAATCTGAACTATAGAAATA CGCTAATCTGGAAGTCttctttgtctttgttatgATTACGTGTACTTTAC CATGGAGAGCTTGtagggttcgaaataccgtttcccggaatcccgaaaat cgaaaataaaactacaccgtcacaccggtttatAGAGGTTAAAAAATACC GTAAAACTGACAAAAACAAGGTTAATCGCCAtgaccgtctgattttaaaa tactgttttcctgtctcttttttcgtcaaatcacGTAATAATGTACTAAG atagggccaatcccgtcacaccgtaaaagtacaacccccccccccctttt ccaGGAATGGGAATGTTCAAACTTTAACAAACTTTGGTTAGCTTAGACGC ATAAAAATAATCAATACTTATTTTGCTTTGCTTGTGAGtggaatttttca accaataggAGTTCACCCCTATTTTCGTacaaattaaatgaaaattaatt aCTGAATCTCAATCCTTCTCAGTCCTTCTCGAGTATATGTTTATATTCAA CTAAATACTcgtaatttggaccaaagttaaAAGTTTTGGCTAAAAATTAG AAGTAATTTCTCACATGGTCATGAAACCGCCAAAAAggggacaaaatttt cgaaattcatctCACAGGATTGATTTTCGAACCTTTGCTCGGACATGTCC GTTACCTCGCAAACCAAGTACTTCCGCCTCGACCACCCCGGGGGCCGTTA GCCATTAAATGTCTTTTAAAAAACTAATTTCTCTGATTAGAACGAGTTAG AACGCAAGATTGAAGCTGTAACAAAATCTAAGATTCACTATAAGCAACAA TGGGGACGAGCACTTCGCGAGTTAGCTCGAATCAAAACGAACGAACAAGA AGAAGCGAAAAGTCGTTTGAAGAAACAACAACAAGAATTAGATCATATGA AATTGAGATATCTTGCGGCTGAAGAAAAACAGGTCAGTGATATAGGAGTC CATAGAGTTTTTTcctgttttgttaagttacttAATTTCCGCCATTCCAT TAtgaaagcaaacgttcgatttgcgtatggtatcgcctctacagattcga acgtttgtttccataatggcggaagttacgtaacttaactaaaaaataaa aaaataaaaaaacctctATAAAGATTCCGTGGGAAATATTTCTCTGTCCA CTATTTCTCTCAGCttgaaccacaagtgattttgtggTTCAGAAATGGTG GCTTGATGGATCTGGCCAGGAAGGATGCAGTCGGCAGTGCTGATGAGTCT CAATAGCTTGAAATTCGTTGTATTTGTTTGCAATAAATCAAGACCGAAGT CAAGAAAACGAGTCTAGCATGCTAAACGACTAATCCACACATTGTAAAAA ATAAGCAACAAGTAATGGATGGGACAAATTGAAGTTAATGCAAACTGATA TTAAATATTATCCCATAGCTATTGTCTTATTATCATCTAACAccaatatt actgtattacacggattatAAACGTCTGCAGTCTTCGCAACAACGACAAC AACTATAAGTTTGTTTATCTGTTTTCAGATGATGCAAACGGAGAAAGAAG AACTGGATCAAGTCAAAGATGAAATCAACAAAAGGTTTGTTTAAATGTGT CAACCATTAGAGCGGCGCGGACTGGTAATAGAGAGTTTCCGAAATCACAT CGAGAACGGCGACTGCGACGTGAGAATCGTCTTCCCCGTCGTCGTTGCCG TCAGCAGTCTTTTACATTCCGATTTCGCTTTCTTTTCTCACACACCGTAA AGTATAATTCATTTCTCATAATAACAAAATATCTATTCTGTAGCGATAGG TTTCTTCGGAGGTTCACGCATGCGCataagtatcaaaacaaacattaaaG TTGCCGTCGCCGTTCTCGTTGTGATTTCGGAAACTCTCTAATGATTTTAC AAGGAACGACGTCTAAACTCTTTTACTTTGAGAATATCAATGCATCAACT TCagacattttgacgtcattccttCCTGGCAAACTTGAGCCCAGTCTCCT CACACGTTAAAGGTTGATAGGTGTAGATTTGACTTTAATGCAATGCTGTG AACAAagagaaaatgagtaaattgaaaagttttatgAGTTCAGAAATAAA ACACTCTTGCGCTTTTGTGTCTCTTTCCTTGATACTTGCGTATTAGTGTT AGTAgggggggggTAGATATATGCAATCGATCGACACTCAAATCTGATAG ATGGTATTAGATAAAATGATGCACGAATATAAAAATCACCTGCAAGAAAA AGAGTCAACCGACAAACAAACAGATGAACAAACACGAACGGACGAaagca aagattttcaaatgtGATGAAGAGCGAACGAGCGAGACCTCAAAGTGTAA CTTACAGcttagagagagagaaaaaaaatgaatcaaaatgaatgaaaaat gatgTTTCTTTAGATTAACAGATCTACAAACGAATTACGAACAACAAATG AGCGCTGCTACCGATCAAAATCACCAACAAGAACTCATCGAAAACGATCA TGGTGACCGCGTTGCTAAGTTACTCGAAGAACGAGATACACTTCTACATA CGGGGGTTTACACTAATGATGATCCTGTTATAAGCGAACTAGACAAAGAG ATACGTTTAATGATAGCAGATAAAAATACTTGA

Coding sequence (CDS) from alignment at sc0000278_pilon:376043..393375+

>XLOC_044990 ID=XLOC_044990|Name=XLOC_044990|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=5106bp|location=Sequence derived from alignment at sc0000278_pilon:376043..393375+ (Clytia hemisphaerica_ch_hm2_pilon)
GCACAAactgctgatataaacaaaGCACAAactgctgatataaacaaaAA
ATCAAACTGGTTCAATTTATTGAACTCAAAGTACAGCAACTTAAAACCGC
GAATCAAATTATCCTTGAATATTGAAGATGATAAAGTCAAAGAGAAAAAC
TCACCATCAAACAAAATCAAACTGGTTCAATTTATTGAACTCAAAGTACA
GCAACTTAAAACCGCGAATCAAATTATCCTTGAATATTGAAGATGATAAA
GTCAAAGAGAAAAACTCACCATCAAACAaaagcaAGCCAAAATTTCAATT
CGGAACACCTGAAAAGCAGAAATCACCATCCGCCAACACTGGGAAATCAC
CACCTGTCAATACTGATGATAGTTTCGAGATCGTTTTGGATGACGAGCAA
GGGTATTACCTGATGGGACCAGAAACATCTGATTGCCAGACTTATGTGTT
GTCAGTTGCTATCAATGGAGTTAAAAATCTTGTCAGTaaagcaAGCCAAA
ATTTCAATTCGGAACACCTGAAAAGCAGAAATCACCATCCGCCAACACTG
GGAAATCACCACCTGTCAATACTGATGATAGTTTCGAGATCGTTTTGGAT
GACGAGCAAGGGTATTACCTGATGGGACCAGAAACATCTGATTGCCAGAC
TTATGTGTTGTCAGTTGCTATCAATGGAGTTAAAAATCTTGTCAGTCTTA
TACCATCGACGTCGGCCATTAGTTCTGAGAATGGATTCTATTTCTATTAT
TCACTTCTTGATAATGACGTCACTAACGAAACGTTCTATGAGTTGATGAC
ACCTTCTATTCCTACAGAAAGAGCGAGTGTTCGTATTTCCACAACTTTTC
GAAGATTGGATGTTTATCTTAAACGAAAACAAACACTAAAGCTTATACCA
TCGACGTCGGCCATTAGTTCTGAGAATGGATTCTATTTCTATTATTCACT
TCTTGATAATGACGTCACTAACGAAACGTTCTATGAGTTGATGACACCTT
CTATTCCTACAGAAAGAGCGAGTGTTCGTATTTCCACAACTTTTCGAAGA
TTGGATGTTTATCTTAAACGAAAACAAACACTAAAGGTTTTCTTTTGTTG
CGGAGACGATACGTTAGGAGAGGCATGGATCCCTCTTGATAAATTAAGTG
ACACAAATAATAACAATCTCTTACCCTCTATGACCAATGGCATGTTCCCA
TTGCGCAGTTCAAAGAATGATCATCGGTCATTGGCGTGCGTGGGCGTCAG
TGTGGTCCTGAGGCGTGAAGATCAACCGGCACCCGTTGTTGCGACGGACC
CAGGGTTGAGCCCGGTTGAAAAGTTGGCTGATAAAAAGGTTTTCTTTTGT
TGCGGAGACGATACGTTAGGAGAGGCATGGATCCCTCTTGATAAATTAAG
TGACACAAATAATAACAATCTCTTACCCTCTATGACCAATGGCATGTTCC
CATTGCGCAGTTCAAAGAATGATCATCGGTCATTGGCGTGCGTGGGCGTC
AGTGTGGTCCTGAGGCGTGAAGATCAACCGGCACCCGTTGTTGCGACGGA
CCCAGGGTTGAGCCCGGTTGAAAAGTTGGCTGATAAAAAGGCCGTATCAC
CAGACACCATTACACCCACCGCCTCTCCACGTTTGGTGCACTCACCGCCA
CCACCGTCTTCCCCGCCCCAACAGCGAAcgccaaagaaaaatcaaaatca
aaattccagAGTAAAAACAAGGGCCGTATCACCAGACACCATTACACCCA
CCGCCTCTCCACGTTTGGTGCACTCACCGCCACCACCGTCTTCCCCGCCC
CAACAGCGAAcgccaaagaaaaatcaaaatcaaaattccagAGTAAAAAC
AAGGCAATCACCAGAGAAGTCGAAGAATAGAAAAGAGAGGAAAGAGCATC
ATTTTGTGTGCTCTGTTGATTTGAGAAGTATTGGACATATGGACATCCCT
CAACCAGTACACTGTTTTTGCCGCAATCACCAGAGAAGTCGAAGAATAGA
AAAGAGAGGAAAGAGCATCATTTTGTGTGCTCTGTTGATTTGAGAAGTAT
TGGACATATGGACATCCCTCAACCAGTACACTGTTTTTGCCGATACTCGT
ACCCATTCTTCGGAAGCTCGTCACCAGTCCTCACCAACCCACCTGTATAT
CTTCAACGTAATTGTGAAGTTGTTTTACCGCAATCTTTCTGTCAATTCGA
ATTCGCATCTCACATGGAAACTGTACAAAGCACATTAGCAAGATACTCGT
ACCCATTCTTCGGAAGCTCGTCACCAGTCCTCACCAACCCACCTGTATAT
CTTCAACGTAATTGTGAAGTTGTTTTACCGCAATCTTTCTGTCAATTCGA
ATTCGCATCTCACATGGAAACTGTACAAAGCACATTAGCAAGAGTGCCAT
TAGTCATCGAAGTGTGGAGTAGAAGCCAAAATCACAAAGATGAGCTCATT
GGTATTTGTCATGTACAACTGTCTAACATTTTCGCATCGTCAAATTTTCA
GAGTGCCATTAGTCATCGAAGTGTGGAGTAGAAGCCAAAATCACAAAGAT
GAGCTCATTGGTATTTGTCATGTACAACTGTCTAACATTTTCGCATCGTC
AAATTTTCAGGAGCGATCCGGACCAGTGGTTTGCAGTGAAAAAGTCCCCA
TCGTCAGCAGTAATAGGAGCGATCCGGACCAGTGGTTTGCAGTGAAAAAG
TCCCCATCGTCAGCAGTAATAGACCCGGCCTAAAGATGGGTGTTATTCAC
GTGGTGTTTAGTTTTGAAGATAGAGGAGAAATCAATAACATCAAATTCTC
GCCGCGACGAGATCAGACCCGGCCTAAAGATGGGTGTTATTCACGTGGTG
TTTAGTTTTGAAGATAGAGGAGAAATCAATAACATCAAATTCTCGCCGCG
ACGAGATCAGACTTCACAATCAACAGACGATACACCATCATACAATCCAC
CCGCACCGCCCGCCAATCAACGTCAACACCAAGAAGATGAGGGGCGGAGG
GCGAAGGAATACGAAGTAGCAATGGCGTTAGAATTGTGGCGGCAGCAAca
agaagaacattttttgaatcaGACTTCACAATCAACAGACGATACACCAT
CATACAATCCACCCGCACCGCCCGCCAATCAACGTCAACACCAAGAAGAT
GAGGGGCGGAGGGCGAAGGAATACGAAGTAGCAATGGCGTTAGAATTGTG
GCGGCAGCAAcaagaagaacattttttgaatcaGTTGAAAGCGAGAGAAA
AAGAACGAATGAAAGCGTTGGCCGATGAATGGAAACAAAGAGATCTGGAG
AGAGAGAAacttttggcgcgaaaaattcaagaatttaACCTGTTGGAAAA
TACCTTGAAAACTTTGAAAGCGAGAGAAAAAGAACGAATGAAAGCGTTGG
CCGATGAATGGAAACAAAGAGATCTGGAGAGAGAGAAacttttggcgcga
aaaattcaagaatttaACCTGTTGGAAAATACCTTGAAAACTTCTTTAAG
TGAGCTTCAATTGAAACAACGGCAAGTGAACGAGGAAGAGCAGCTGTTAG
AGAAGAAGAAAGCTCACCTAGCGGACGAATTTGACCGAAAGGTGTGCGAG
ATGAGAGAAGCTTCAAAGCGGCTCAAAGAAGAATACCAACATCAACTTCA
AATcgagaaaaataaacagaaagaagttGAAGAGAGTCTTTAAGTGAGCT
TCAATTGAAACAACGGCAAGTGAACGAGGAAGAGCAGCTGTTAGAGAAGA
AGAAAGCTCACCTAGCGGACGAATTTGACCGAAAGGTGTGCGAGATGAGA
GAAGCTTCAAAGCGGCTCAAAGAAGAATACCAACATCAACTTCAAATcga
gaaaaataaacagaaagaagttGAAGAGAGATATCAGCGTATGGTGGAGC
ATTCTCAAGAGCTCGAACGGAAAGTTAAAGAAAAAGACAACGAAATTTAT
GCGCTCAAAGAGAGTCTCGTTAAACGACCTGAAGTCAAAATGCAATCAGA
CATGAATATATTACTCATTGAAAAGATATCAGCGTATGGTGGAGCATTCT
CAAGAGCTCGAACGGAAAGTTAAAGAAAAAGACAACGAAATTTATGCGCT
CAAAGAGAGTCTCGTTAAACGACCTGAAGTCAAAATGCAATCAGACATGA
ATATATTACTCATTGAAAAGAACGAGTTAGAACGCAAGATTGAAGCTGTA
ACAAAATCTAAGATTCACTATAAGCAACAATGGGGACGAGCACTTCGCGA
GTTAGCTCGAATCAAAACGAACGAACAAGAAGAAGCGAAAAGTCGTTTGA
AGAAACAACAACAAGAATTAGATCATATGAAATTGAGATATCTTGCGGCT
GAAGAAAAACAGAACGAGTTAGAACGCAAGATTGAAGCTGTAACAAAATC
TAAGATTCACTATAAGCAACAATGGGGACGAGCACTTCGCGAGTTAGCTC
GAATCAAAACGAACGAACAAGAAGAAGCGAAAAGTCGTTTGAAGAAACAA
CAACAAGAATTAGATCATATGAAATTGAGATATCTTGCGGCTGAAGAAAA
ACAGATGATGCAAACGGAGAAAGAAGAACTGGATCAAGTCAAAGATGAAA
TCAACAAAAGATGATGCAAACGGAGAAAGAAGAACTGGATCAAGTCAAAG
ATGAAATCAACAAAAGATTAACAGATCTACAAACGAATTACGAACAACAA
ATGAGCGCTGCTACCGATCAAAATCACCAACAAGAACTCATCGAAAACGA
TCATGGTGACCGCGTTGCTAAGTTACTCGAAGAACGAGATACACTTCTAC
ATACGGGGGTTTACACTAATGATGATCCTGTTATAAGCGAACTAGACAAA
GAGATACGTTTAATGATAGCAGATAAAAATACTTGAATTAACAGATCTAC
AAACGAATTACGAACAACAAATGAGCGCTGCTACCGATCAAAATCACCAA
CAAGAACTCATCGAAAACGATCATGGTGACCGCGTTGCTAAGTTACTCGA
AGAACGAGATACACTTCTACATACGGGGGTTTACACTAATGATGATCCTG
TTATAAGCGAACTAGACAAAGAGATACGTTTAATGATAGCAGATAAAAAT
ACTTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_044990XLOC_044990-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000278_pilongenomesc0000278_pilon:376043..393375 +
Properties
Property NameValue
Aaloc2629-2847:17115
Aaloc2572-2625:16229
Aaloc2380-2571:15441
Aaloc2236-2379:14523
Aaloc2041-2232:11335
Aaloc1912-2040:10786
Aaloc1750-1911:9960
Aaloc1657-1749:9382
Aaloc1600-1653:8772
Aaloc1492-1599:7630
Aaloc1342-1488:6381
Aaloc1222-1338:5793
Aaloc1090-1221:3902
Aaloc838-1089:2989
Aaloc643-837:2376
Aaloc436-642:1024
Aaloc319-432:653
Aaloc295-318:1