|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000057_pilon:406165..407664- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_044979 ID=XLOC_044979|Name=XLOC_044979|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1500bp|location=Sequence derived from alignment at sc0000057_pilon:406165..407664- (Clytia hemisphaerica_ch_hm2_pilon)
GCCGTAAACGTCAAAGGGGACAGAATTCGCTACAATGATGGCTTGGTGTA
CTGTTATGGGAAGTCCTCCGTCTTCATCTATCCTTCAGAAAAGAAATCAA
ACGCCAAGTTATCCATCAGTGCCATAAAAACGAAGAAAGCAGCAGTTGAA
AAGTTGAAATTTATCGGCCTACCATCTGATGGTACAACCTCGCAACTTAT
CACAAGATTACACAAACACCAGTCAGACACAATCAAGAAGTACAAACAGA
TGAAAGTTGAGGAATCAACCTTACTAATTTTCATGGACCATGAGTTATGT
CGATACCAAGTAGACACAATCCTGTTCATTGATACCAACAGTCTATACAT
CGCATTTGGCTCAGAAAAGCTCCTGGCAATCGGATCCTTGAAGTATAATT
CCGTCGGTGTCGAAACAAATTGTGAGGCTTTTCAAAAGTACGATGATGAT
TGGCAAAGCATATCAGACATGGCCATCGTCAAAAAACACCTTATCATTGC
TCACAAGAATGGTTTGTCACTTTTCCACCTTGAGTCACGTGCAATTTCGA
ATGTCCCTCATTGTGATGGATTAACAGCAGATCATCTGGCCCCATTTAGG
GATGGCTTTCTCTTCATTGAAGGGGCTAAAAGGAAAAATTGTATCTACCT
TTGGAGAGAAAGTGGGTTAGAAGTATTTGCAGGCAAACAAGGACAAGATG
GCAGCAGAGATGGTACAGCTTCCTACTGCCGATTTTTTGAAGTATCTTCC
ATAACAGTCGAGTTCAATAATGTGGTATATGCATCAGACCGCAAACTTGG
ATCCATTAAAGTAATCACCGAGCTGAATGAAACGGCGAATTTCCTGCGTG
GGTTGAAGAAGATGATAGATGCTTTCTCCGTTCATGAAAAGCATCAAGCC
TATTCTTTGAAGTCTTTGGATGAAGCCATCTCGTTGGTTTCTCAATGCGA
CGAAATGTTATCAAAGAACACAGAAGTTATTCGCTCAATGGGAAACCTAC
CGCGCACATTGAATGGTCCTGAGGGAAATGTTTCCGCTATTACCATCGAC
TCGATCAAAATGCTTCATTGGGGCTTAAAACGTCTAAAGACAAACACAGA
AAGTCTCACGTATGACCGAGTCAATTTGCTGAGTTGTATGACCCTTGCCG
TTGAGAACTTGCACTCAGCCGTCAATAAAAAGCAAGGAACGCAAACCCTC
GTATCGTATGCTCAATCGTTTGCTTCGTCAGTCAAGGAATCTATCAAATC
TGCCACCGAATGGAGCGCCCATTATTTCACCTCAAGGGAAAGATGGTATC
CGCTTCCCAACACAGTGCTGTCATTGAGTGACTTGGATTTCCCGAAACGA
GCAAAGAGAAACCAAGGGCTCACCAGAGAACAAAAACGAGAGATGAGAGA
GTGGGCATCCATAAATGGAGCAGTGGTGCGCCAACGTAGTGGAAGACAGG
AAACAACCATGGCTAGAGCAGGCACGTTACCAGAAAATGCTTACTACGAA
Coding sequence (CDS) from alignment at sc0000057_pilon:406165..407664- >XLOC_044979 ID=XLOC_044979|Name=XLOC_044979|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3000bp|location=Sequence derived from alignment at sc0000057_pilon:406165..407664- (Clytia hemisphaerica_ch_hm2_pilon)
GCCGTAAACGTCAAAGGGGACAGAATTCGCTACAATGATGGCTTGGTGTA
CTGTTATGGGAAGTCCTCCGTCTTCATCTATCCTTCAGAAAAGAAATCAA
ACGCCAAGTTATCCATCAGTGCCATAAAAACGAAGAAAGCAGCAGTTGAA
AAGTTGAAATTTATCGGCCTACCATCTGATGGTACAACCTCGCAACTTAT
CACAAGATTACACAAACACCAGTCAGACACAATCAAGAAGTACAAACAGA
TGAAAGTTGAGGAATCAACCTTACTAATTTTCATGGACCATGAGTTATGT
CGATACCAAGTAGACACAATCCTGTTCATTGATACCAACAGTCTATACAT
CGCATTTGGCTCAGAAAAGCTCCTGGCAATCGGATCCTTGAAGTATAATT
CCGTCGGTGTCGAAACAAATTGTGAGGCTTTTCAAAAGTACGATGATGAT
TGGCAAAGCATATCAGACATGGCCATCGTCAAAAAACACCTTATCATTGC
TCACAAGAATGGTTTGTCACTTTTCCACCTTGAGTCACGTGCAATTTCGA
ATGTCCCTCATTGTGATGGATTAACAGCAGATCATCTGGCCCCATTTAGG
GATGGCTTTCTCTTCATTGAAGGGGCTAAAAGGAAAAATTGTATCTACCT
TTGGAGAGAAAGTGGGTTAGAAGTATTTGCAGGCAAACAAGGACAAGATG
GCAGCAGAGATGGTACAGCTTCCTACTGCCGATTTTTTGAAGTATCTTCC
ATAACAGTCGAGTTCAATAATGTGGTATATGCATCAGACCGCAAACTTGG
ATCCATTAAAGTAATCACCGAGCTGAATGAAACGGCGAATTTCCTGCGTG
GGTTGAAGAAGATGATAGATGCTTTCTCCGTTCATGAAAAGCATCAAGCC
TATTCTTTGAAGTCTTTGGATGAAGCCATCTCGTTGGTTTCTCAATGCGA
CGAAATGTTATCAAAGAACACAGAAGTTATTCGCTCAATGGGAAACCTAC
CGCGCACATTGAATGGTCCTGAGGGAAATGTTTCCGCTATTACCATCGAC
TCGATCAAAATGCTTCATTGGGGCTTAAAACGTCTAAAGACAAACACAGA
AAGTCTCACGTATGACCGAGTCAATTTGCTGAGTTGTATGACCCTTGCCG
TTGAGAACTTGCACTCAGCCGTCAATAAAAAGCAAGGAACGCAAACCCTC
GTATCGTATGCTCAATCGTTTGCTTCGTCAGTCAAGGAATCTATCAAATC
TGCCACCGAATGGAGCGCCCATTATTTCACCTCAAGGGAAAGATGGTATC
CGCTTCCCAACACAGTGCTGTCATTGAGTGACTTGGATTTCCCGAAACGA
GCAAAGAGAAACCAAGGGCTCACCAGAGAACAAAAACGAGAGATGAGAGA
GTGGGCATCCATAAATGGAGCAGTGGTGCGCCAACGTAGTGGAAGACAGG
AAACAACCATGGCTAGAGCAGGCACGTTACCAGAAAATGCTTACTACGAA
GCCGTAAACGTCAAAGGGGACAGAATTCGCTACAATGATGGCTTGGTGTA
CTGTTATGGGAAGTCCTCCGTCTTCATCTATCCTTCAGAAAAGAAATCAA
ACGCCAAGTTATCCATCAGTGCCATAAAAACGAAGAAAGCAGCAGTTGAA
AAGTTGAAATTTATCGGCCTACCATCTGATGGTACAACCTCGCAACTTAT
CACAAGATTACACAAACACCAGTCAGACACAATCAAGAAGTACAAACAGA
TGAAAGTTGAGGAATCAACCTTACTAATTTTCATGGACCATGAGTTATGT
CGATACCAAGTAGACACAATCCTGTTCATTGATACCAACAGTCTATACAT
CGCATTTGGCTCAGAAAAGCTCCTGGCAATCGGATCCTTGAAGTATAATT
CCGTCGGTGTCGAAACAAATTGTGAGGCTTTTCAAAAGTACGATGATGAT
TGGCAAAGCATATCAGACATGGCCATCGTCAAAAAACACCTTATCATTGC
TCACAAGAATGGTTTGTCACTTTTCCACCTTGAGTCACGTGCAATTTCGA
ATGTCCCTCATTGTGATGGATTAACAGCAGATCATCTGGCCCCATTTAGG
GATGGCTTTCTCTTCATTGAAGGGGCTAAAAGGAAAAATTGTATCTACCT
TTGGAGAGAAAGTGGGTTAGAAGTATTTGCAGGCAAACAAGGACAAGATG
GCAGCAGAGATGGTACAGCTTCCTACTGCCGATTTTTTGAAGTATCTTCC
ATAACAGTCGAGTTCAATAATGTGGTATATGCATCAGACCGCAAACTTGG
ATCCATTAAAGTAATCACCGAGCTGAATGAAACGGCGAATTTCCTGCGTG
GGTTGAAGAAGATGATAGATGCTTTCTCCGTTCATGAAAAGCATCAAGCC
TATTCTTTGAAGTCTTTGGATGAAGCCATCTCGTTGGTTTCTCAATGCGA
CGAAATGTTATCAAAGAACACAGAAGTTATTCGCTCAATGGGAAACCTAC
CGCGCACATTGAATGGTCCTGAGGGAAATGTTTCCGCTATTACCATCGAC
TCGATCAAAATGCTTCATTGGGGCTTAAAACGTCTAAAGACAAACACAGA
AAGTCTCACGTATGACCGAGTCAATTTGCTGAGTTGTATGACCCTTGCCG
TTGAGAACTTGCACTCAGCCGTCAATAAAAAGCAAGGAACGCAAACCCTC
GTATCGTATGCTCAATCGTTTGCTTCGTCAGTCAAGGAATCTATCAAATC
TGCCACCGAATGGAGCGCCCATTATTTCACCTCAAGGGAAAGATGGTATC
CGCTTCCCAACACAGTGCTGTCATTGAGTGACTTGGATTTCCCGAAACGA
GCAAAGAGAAACCAAGGGCTCACCAGAGAACAAAAACGAGAGATGAGAGA
GTGGGCATCCATAAATGGAGCAGTGGTGCGCCAACGTAGTGGAAGACAGG
AAACAACCATGGCTAGAGCAGGCACGTTACCAGAAAATGCTTACTACGAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000057_pilon | genome | sc0000057_pilon:406165..407664 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1-1500:1501 |
|
