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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000002_pilon:3346206..3349756+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_044959 ID=XLOC_044959|Name=XLOC_044959|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3551bp|location=Sequence derived from alignment at sc0000002_pilon:3346206..3349756+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCCTCATCCAAAACATTCATCTTTTTGCTGGTTGGCTTGGTATGCAG
CGTGGCAGCATGGAACTCCAATATGGAAAGTAAGAGATTTTCTGtgaatc
atcatcatcatcataatcatTATGCCAAtggaaaaagtttgaaaacaatt
taCACCACAGGTATCTCCAGTAGCGTGGTACCCCCTAGGTGGGCAACTCT
CCCCCTCCCTCAAGCGGCAAATTTTTTGGCAGCGCCGAATGACAAGCCTC
TAGTTACTTATTTGAGCACCCCTTTGCTCTTTCCACCTTAGAATTAGCAA
TTCTAAgccaaaaaaaaggaaaaaaatacttATAATTTTCATTCACGCTT
CCCTCCCTCcttatttttacaaacatatcttattttcaaaaagagcgcCG
AAATCCCTACTTTTGAGAATTGCCTCCCCGTTTGCCCCAATTTTGGTCGA
CCCACCATGCTACTGCATATCTCCTACAATATCTTTGATCTGTAAACATG
AGATAGGGAGGTACACGAGATAGAATTTTAGTCTTAATAGAGAGATAAAT
GGTGCAGAACTGTTCAGTCTGACCGTCGGTCCGACATGggtatttatttt
tgtgtttcaGAGGAAGACCTCTTTGAAGGTGATATTATCCTGAATGATTT
TCAGAAGAAAGCTTTGAGATCACCACTTGGCTATGGCCTCACATCCAAGA
AAGGTTTCAATAAACATTGGCCCAAAGGAGTTCCAATTGCGTATGAAATG
TCAGCTGAGTTTGCTAGAGGTGAGTCAAAAAACCTTTACCTGGGTTTCAC
CAATTATCCTTGACCCTTCTTATCAATTTTCTGAGTATCAAGTTAATACT
GTAAATATAACTCAGCTGTTACCAGTGTCTCTCttgttttaattgttgtt
tttttgttttatttatttgtcgATTACTTAAACCTAGTATTGGCTGCTGA
GCAAAAATATCTCCTCTAAgagaaaatttccagaaaagattaaataatag
ttatcgcacggtaccgattacaatatgggatatatttttcaagttcagat
ttttcgtcatatattcgaggaaaatatagaaaacacTACAATTATACTTT
TTAGATGCTTCGAAGAAAGCAAAGATTGAGGCAGCATTCAGAGATTATGA
ACAAAAGACATGCTTGAGATTCGTACCGAGGACTAACCAACAACAATTCA
TGCATTTCAGAAGACAAGGACAGGGGTAACACTTTTTCTGAACAGCTTTT
GATAAACAAACTAAGAAATAGGTAGTCTTTGAAAAAGCAATAACAAACAC
TTATTACTCTACATAGTCCTTTCACCCGAGTGGGGGCAGCTGAGCAAAAT
GACCGACAGGTTTGCGTGGActctaagggtaccttttcaaaGATGTTTAA
AATGaactgtaagggttggaaaaactagagatgcactgtaagggtagaaa
tttcagaaagttcttgaaaaacctagatattttgcccattttttgcacga
aatgaattgaaaatttgaaaatctggGGGGACATGCACTGTAAAGGTatg
attttcaccaatttttgctgcactgtaacggtgcaattttaaaagccaat
ttttggcccgcacataccgtcagtccgcaaacccagtgcccctcCCCCGC
GTCCTTTCACCATATGTTGATGGATACTTGTCCAGGGGGCGGGGAGGCAG
TCGGCCAAAACTCACCAAtgggtatgtttttcaagatagcagaaattcac
tgtaagggtggacttttgatagaTGCACAGCAAAcctaggaaaaattgca
aatttttgcctgaaaattctgatttttttgctgtaaaagaGTAAAAATGT
CACACTgtagggtgcgattctaaaagccatttttcgccgcacataacGTA
GGTTGGTAAACCTGTGACTGTTTTTGACTTTGAGTTAGGTATTGGTGTAC
CAGCAATtggtaaaacaaaaacaatttgacAAACGACTAATAAATGaaca
ttgtcttttcagttgtTACACATCAGTGGGTATGCAGTATCGTGGCAATT
TCATCAATCTAGGAGTCGGTTGTTTCACACACGGCGTTTTGATTCACGAA
ATCATGCATGGTCTTGGGGTTTGGCACGAGCAAAGCAGAGGTGATCGAGA
CCAACATATCAAGATTAATTACCATAACATGAAATGCTGTAAGTTTTAAA
CTACTCAAACTAGAGTCTACTGGTGACGCCCAAAACTGTCATTCGTATAA
TTcagtacacccctgtgtcacataccCGCTGGGTATTTCAATAGAAAGTT
TCATCctcattgagaaaaaatctttcaccAGGGTGTCCCGCTtaattttt
gttaatttgaacctctttataactcgaatttctcctaaaatcgaacaaat
tgctggtcccttcagttaacaatgccttataaaccttactctataTCTCG
AAATTTATTTAACTCGAACAGATATCCGTTCTACgtgcatgttcgagtta
tggagattctaTTGTACTTTGACTGACTAGAGTGTAGTGCTGATTGTCAT
AACTGGCACTCGGGCTATATACTACGTGGTCAGAATGAGAGTCAAAACca
cttcttttttcattcatGTTTCACGAGATAAAGGACAGAATTTTTCAGAA
GAATGAAAACCATTTGTTTTCCTGGGCTAAACAATTGGTTATCTTTCAAA
ATACCGAAATCACTAGCGTCAGCAGTTTTTAATGAACATTTTTCCCATGA
GGCCAAACAGTTTGGTTCTTCAATATATTTTGCTGTATTTGGTGACATGC
TAAAAGAAATGTAGTGTTAGAAATAGTTGGTAATATCTTGCTACAaccaa
caaaaatattcaaataaaatataCACTTCTATAAGGAAATAATCTGAGAA
TATCGTCTCAATATTTCAGGTAAAAGTCAATTTACAGAGCGAGGCTACAC
CATCGACAGCCTTGGGTTTCCATACGATTTGAAAAGCGTGATGCATTATG
GGCCCTGGGCTTTCTCGAACGGAAATGGTCCAACCATTGAACCCCTGAAT
AAAATGGAAAGAATTTATAACAACGGACAATTTTCAGATATTGATATTCA
ACAATTAAATGCAATGTACTGCGGTGGACCACGTAAGTAATTTCTTTTGA
TATGAAAGCCAAACTCATTACAATCACGTCAAAACAAACAATAATCCTAT
ACCGGATTTTTGATTTAGGGGGCCGGTAATAACCGAATATACCTTTTAAG
TCACTTTGAAGCTGAAAGAGTTATGAACACTTTCCATTCTGTTATGAAAA
AGTTTAAACCATTGAAATTGACCTTGGTCTAGAGCTCTAGACGTATCACT
GTCTTAGTACACTTCTTACAAAGGATAAAGAACATGAGTGGCCATATCAA
GGTATCTTTCTCCCTCCTAGATGGATCAGGCACCACAACGACCAAAGCAC
CAGTCACTTCTGCGCCACGTGGCAAGCTCTTTAAACAAGTCAGCAGCAAC
AAATGTCTTGGTCATGATCACAACGATAACCTCATCTTCACCAGTCGTTG
T Coding sequence (CDS) from alignment at sc0000002_pilon:3346206..3349756+ >XLOC_044959 ID=XLOC_044959|Name=XLOC_044959|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1758bp|location=Sequence derived from alignment at sc0000002_pilon:3346206..3349756+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCCTCATCCAAAACATTCATCTTTTTGCTGGTTGGCTTGGTATGCAG
CGTGGCAGCATGGAACTCCAATATGGAAAATGGCCTCATCCAAAACATTC
ATCTTTTTGCTGGTTGGCTTGGTATGCAGCGTGGCAGCATGGAACTCCAA
TATGGAAAAGGAAGACCTCTTTGAAGGTGATATTATCCTGAATGATTTTC
AGAAGAAAGCTTTGAGATCACCACTTGGCTATGGCCTCACATCCAAGAAA
GGTTTCAATAAACATTGGCCCAAAGGAGTTCCAATTGCGTATGAAATGTC
AGCTGAGTTTGCTAGAGAGGAAGACCTCTTTGAAGGTGATATTATCCTGA
ATGATTTTCAGAAGAAAGCTTTGAGATCACCACTTGGCTATGGCCTCACA
TCCAAGAAAGGTTTCAATAAACATTGGCCCAAAGGAGTTCCAATTGCGTA
TGAAATGTCAGCTGAGTTTGCTAGAGATGCTTCGAAGAAAGCAAAGATTG
AGGCAGCATTCAGAGATTATGAACAAAAGACATGCTTGAGATTCGTACCG
AGGACTAACCAACAACAATTCATGCATTTCAGAAGACAAGGACAGGGATG
CTTCGAAGAAAGCAAAGATTGAGGCAGCATTCAGAGATTATGAACAAAAG
ACATGCTTGAGATTCGTACCGAGGACTAACCAACAACAATTCATGCATTT
CAGAAGACAAGGACAGGGttgtTACACATCAGTGGGTATGCAGTATCGTG
GCAATTTCATCAATCTAGGAGTCGGTTGTTTCACACACGGCGTTTTGATT
CACGAAATCATGCATGGTCTTGGGGTTTGGCACGAGCAAAGCAGAGGTGA
TCGAGACCAACATATCAAGATTAATTACCATAACATGAAATGCTttgtTA
CACATCAGTGGGTATGCAGTATCGTGGCAATTTCATCAATCTAGGAGTCG
GTTGTTTCACACACGGCGTTTTGATTCACGAAATCATGCATGGTCTTGGG
GTTTGGCACGAGCAAAGCAGAGGTGATCGAGACCAACATATCAAGATTAA
TTACCATAACATGAAATGCTGTAAAAGTCAATTTACAGAGCGAGGCTACA
CCATCGACAGCCTTGGGTTTCCATACGATTTGAAAAGCGTGATGCATTAT
GGGCCCTGGGCTTTCTCGAACGGAAATGGTCCAACCATTGAACCCCTGAA
TAAAATGGAAAGAATTTATAACAACGGACAATTTTCAGATATTGATATTC
AACAATTAAATGCAATGTACTGCGGTGGACCACGTAAAAGTCAATTTACA
GAGCGAGGCTACACCATCGACAGCCTTGGGTTTCCATACGATTTGAAAAG
CGTGATGCATTATGGGCCCTGGGCTTTCTCGAACGGAAATGGTCCAACCA
TTGAACCCCTGAATAAAATGGAAAGAATTTATAACAACGGACAATTTTCA
GATATTGATATTCAACAATTAAATGCAATGTACTGCGGTGGACCACATGG
ATCAGGCACCACAACGACCAAAGCACCAGTCACTTCTGCGCCACGTGGCA
AGCTCTTTAAACAAGTCAGCAGCAACAAATGTCTTGGTCATGATCACAAC
GATAACCTCATCTTCACCAGTCGTTGTATGGATCAGGCACCACAACGACC
AAAGCACCAGTCACTTCTGCGCCACGTGGCAAGCTCTTTAAACAAGTCAG
CAGCAACAAATGTCTTGGTCATGATCACAACGATAACCTCATCTTCACCA
GTCGTTGT
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000002_pilon | genome | sc0000002_pilon:3346206..3349756 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 751-879:3423 |
| Aaloc | 538-747:2922 |
| Aaloc | 361-534:2014 |
| Aaloc | 241-357:1107 |
| Aaloc | 82-237:613 |
| Aaloc | 1-78:1 |
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