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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000002_pilon:3378804..3382822+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_044957 ID=XLOC_044957|Name=XLOC_044957|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4019bp|location=Sequence derived from alignment at sc0000002_pilon:3378804..3382822+ (Clytia hemisphaerica_ch_hm2_pilon)
GTCGAAAACATTGACCAATCAAGAACAGATATTCCTGGTGAAAACATTGA
ACAATCGAGATCAGATATTCCTGGCGGAAATGTTGAACATGTGATATCGC
GTTCTcctgaaaaagatgaaaatgaagaaaatgaggTCGAAAACGAGGCT
GAGAGGGTGATTTACAGAGAAGAGATCTTCTACGGTGACGAGGATCAATC
AATAGATTACACTCCTGTACTTTGCAATTATATCAGTGGAGAGGAGTCTC
TTTCGCAAGAAACGTGCGATTCTGAACAAGACACTGCAATCGATGCTGAA
CCATTTCAAGACGATAACGATGAGCCAAAAGAACAATGGGACGAAGAAGA
AGCTGAAGTTTACGAAGAACCACCTCAAAGACAACGACAAACAGAGATTG
AGCCAGAGCAGCCCATATCATTGGATCCAACATTGTGGCCTGAACTTATA
AGTGACTACCCAccaatcaagaaaacgaaagcaCCAGAGAAGCGAGCGCA
ACCAGCTATTGATGATCATAAGGAAGATCAATCACGTGCTGAGTATCGTA
AGAATGTTCACCAATCAATGAATTTTGTAATGCCAACACCAAAAGCTACT
CGAGATGAACATCCAAAACAATCTCCACAGAAGAAAGCGGAACGAAAGAG
AGGGAACATCGACAGTTTCTTTCTACCAGTCGAAAAGAAAGGATCACCAG
TCAAGCTACCTCCTGCTGCACCATCCCACAATACAACCAGGATACCGTAC
TGCAACTTATCGAAAGAAGGGGATGAGAAAGGAGCCATGGTCTTGTATCT
GACCACCAATaagaaggaaaaagaaaagacagAAGGGAATGTGTCAACTT
CAAGTCAGCAACAACAGGTTCCAGAATCACTTCCACCACAAACCACACCG
AAGAAAAGTAAGTAACCATTCTTTATTGCACTCCCAACAAGAAAATACCA
ACTACTTTATCATTTAGCTTCAGGAAACTCATGCGATTGCTCAATCAAAG
TTTGGCACTACTATATCTTTGGAATAACAAGAGTCGAATGAGTCAAGCTT
TGTTGTGttgtttgaaataaaatcttcTCTTTGCTTATagaaacgaataa
acccgacaaagaggagaaaaagaaaaagaataagaagcaaaagaaaaagg
agaaagaGTTGAATACACCCGTCAAACCTTTCATGAAAACTCACAAAACT
GATGAAGACCAACCTGCAGCAATCACCCCAAAGCGCCCTAGACAACCTTC
TGATCAAGAGTGGCTCTCACCTTCACTAGACATTGCACGAAACAAAAGTA
TGTTACCCTTCCCTACTCAAGCGACggtttacacgcttttttacaagaat
atacgcagcatgatgaaattggcctaaaaattaagaatatgctaagaata
cccATCATCATTGAATTTGGCAagtgaacctaagaatgctattttttgag
cattttaatTGCCAATTATACCCcagaaatgctaaaaaaatacaatattc
tTAATTTAAGTATGTAGTGCATGCTAGATTTAGACAGGGTTTGGATCCAA
Acataagaataccgtaagaatatttaaggatgattttccccaaaaagtta
agaatatccataatgaaatggaaaaacaccattaaTAAATTTCAGTTGGG
TAATCTAAAGACACTCAAACTTATTATTATATTGGTGAACATGAATTTAG
TGATGTGTGAATTCCATGTTATTAGAGTtaggaaaaattttctttcagga
AGCGAAGAATCTGAGATGAGGAGGAGGCTGGGGAGACTTTCAACATTCCG
AGGTCCCAAATATAATGAACATGCAAACGAAGTAGCTGCTATTTACCAAG
AAAAACATCCTGACACGATCATGAATTTCAATACTTGTCTGACGAAAGGA
AATCGGACAGATATTCATCAGTCTGTCAAGTGAGTTCGACATTTTTCATT
TCTGTATTATTTCAATCTGAAACTTACCAAATCTTCGTTTGAGATGGAGA
GTTTGATGATGACTGGCTTCTCTTCAGAGAGGATGCCCGGTTCTGTATTG
AGTGGTCTGGGAGTCGTCTCGTTAGAACCGTCTTACGCTGTAGTTTATAC
TGAAAACCAGCTTGCATGACACTAAGTGTGCTAACAGACGATGTAAGGAT
GTATAGATTCCCaagaacatttttgttttgaacaataATAATTTTTGAGG
TTAACAACTTCTTGGTCCATAATTTTACAGAGAAATCAATCCGCGAAATA
CCCCTGAAGTGCAGAGTTTCCACATCACCATTCGACGATGTTTGGCGAAT
CACAATTTCCCTCAATTATGTACAGATGCAAAGTCTGAACGAGTTGGACT
TCTCAACATTCTCAAGAAGAGCTGCAAGGTGCTCAATGGTAAGTAAAAGG
GTTTAATCTAAGCTGTGGTGTATGAAGAACTTTGTTTTATAAAGTCAGAA
ATCGATTTATGTTCAAGTCACGGACACGAGTCTTCTGTAATCAGGTTATG
CTGTGTTTTCTTCACTAAAATAGTAAGATTAACCCATCAGAGCCATATGG
TTTACCaataaatctcttttttttcaaaaacaattaattTATTGGCTGAG
TGATTTAATGTTGCCTACACCTAGCCTGTACAAAACTGTTTAGAAGGTTT
GCCACACCGGTGCTCAAGATTGCCTgaataaacaatttttaaaatcttgt
attaaaaaaagCAAGGTAATATCTATAACATGGTAAAATTAATCTTTGTT
TTGTGGAACTTCAGATCGTTTCAAGGGACAATCTTCCCCGTTGACCTTCC
ACGATGAGCATCTTGCAGACTTGTTGAGGAAAGGCGTCATCAAACCTGAA
GAGCAGAGTGAAGAAACTGCTTACTCAGCAACTTATAAAGGACAGGGTGG
TCGCGTTCTTGTGTTGTTGAATTATATCGAACATTATCGCATCATTGTGT
CTACAAGAAAAGGCGATCTGAAGGTAAGTATTATTTATGATTGTTGTTTA
CATGTTttttggtcaggctcgtgtatgcttaagttctcaaagcatccagg
catagcttatgcttattatatgcttatgaatcatgcttataattcacccc
gagccaagttttagcgaaattttagaatttttttaaaaatttgctcagat
ttgggagcagtggtagccgtggaatgtcttttgttcacttgacctctacc
aaacctttttaaactgataaaaaatgacaccttcatatgcttataagcgt
tgtgcttataaaaaaacatgttttagaCAAAATATAGAGTACTAGACTCT
TTACCTAGTCCAAGCAAGGGTTTGACACTATTTCCCGAGTTTGAGATTTG
TTCTGTAGGCTATGTTTGCGAAAACTACCTACTCCTCTAACCATTACAAG
AAATATGAATAGTGCAAATGTAGCCAGTTATTTTCCAACgaattcaaata
tttctatCATTTCCAATTCTTAGCGATCATTTTCAGAAGCACAAAGCATT
GTGTGTAGCATTGAGCAAGTGTTGACACCCAAGAACCTTTCATACGCTTT
ACACAAAAAGCTAGGCTACGTCAACCCTACGTCTATTGGACATGCTTTCA
ATTGCCACGTGGAAGTCACCTTTCAGTGTCTCGAGGTAAATTAATCTCAT
TTGTAAGGAACGAGGTAATGGGCTTTTCATACATTCATGCATTCAGTCTT
CTGGACAGATAAATAAGCTGGGAATGTTTATGTTCAAGCTCATGGTTTTC
TTTGTATCATTTGAATTAAGGGAACTATTCACAGAATCCGAAATGTTTGG
CAGAAATTTGTAATTAGCAATATCCTTGATGAAGAAAAAGTTTAGTCCAC
CTGTTCATCAACTCAAAGGAGAGAAACTTTTACTACTTTGCATACATTTG
GTGTTGAGCCTGATTTTTTGTTCTTCCTTCGTTATTGATTTGTTGTATTT
CTTCGTTAACAGGATAAAGATGTATGCAAGTTCCTGAATGAGGAGGGGTT
CGATGTCGTCCAAATAAGT Coding sequence (CDS) from alignment at sc0000002_pilon:3378804..3382822+ >XLOC_044957 ID=XLOC_044957|Name=XLOC_044957|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3762bp|location=Sequence derived from alignment at sc0000002_pilon:3378804..3382822+ (Clytia hemisphaerica_ch_hm2_pilon)
GTCGAAAACATTGACCAATCAAGAACAGATATTCCTGGTGAAAACATTGA
ACAATCGAGATCAGATATTCCTGGCGGAAATGTTGAACATGTGATATCGC
GTTCTcctgaaaaagatgaaaatgaagaaaatgaggTCGAAAACGAGGCT
GAGAGGGTGATTTACAGAGAAGAGATCTTCTACGGTGACGAGGATCAATC
AATAGATTACACTCCTGTACTTTGCAATTATATCAGTGGAGAGGAGTCTC
TTTCGCAAGAAACGTGCGATTCTGAACAAGACACTGCAATCGATGCTGAA
CCATTTCAAGACGATAACGATGAGCCAAAAGAACAATGGGACGAAGAAGA
AGCTGAAGTTTACGAAGAACCACCTCAAAGACAACGACAAACAGAGATTG
AGCCAGAGCAGCCCATATCATTGGATCCAACATTGTGGCCTGAACTTATA
AGTGACTACCCAccaatcaagaaaacgaaagcaCCAGAGAAGCGAGCGCA
ACCAGCTATTGATGATCATAAGGAAGATCAATCACGTGCTGAGTATCGTA
AGAATGTTCACCAATCAATGAATTTTGTAATGCCAACACCAAAAGCTACT
CGAGATGAACATCCAAAACAATCTCCACAGAAGAAAGCGGAACGAAAGAG
AGGGAACATCGACAGTTTCTTTCTACCAGTCGAAAAGAAAGGATCACCAG
TCAAGCTACCTCCTGCTGCACCATCCCACAATACAACCAGGATACCGTAC
TGCAACTTATCGAAAGAAGGGGATGAGAAAGGAGCCATGGTCTTGTATCT
GACCACCAATaagaaggaaaaagaaaagacagAAGGGAATGTGTCAACTT
CAAGTCAGCAACAACAGGTTCCAGAATCACTTCCACCACAAACCACACCG
AAGAAAAGTCGAAAACATTGACCAATCAAGAACAGATATTCCTGGTGAAA
ACATTGAACAATCGAGATCAGATATTCCTGGCGGAAATGTTGAACATGTG
ATATCGCGTTCTcctgaaaaagatgaaaatgaagaaaatgaggTCGAAAA
CGAGGCTGAGAGGGTGATTTACAGAGAAGAGATCTTCTACGGTGACGAGG
ATCAATCAATAGATTACACTCCTGTACTTTGCAATTATATCAGTGGAGAG
GAGTCTCTTTCGCAAGAAACGTGCGATTCTGAACAAGACACTGCAATCGA
TGCTGAACCATTTCAAGACGATAACGATGAGCCAAAAGAACAATGGGACG
AAGAAGAAGCTGAAGTTTACGAAGAACCACCTCAAAGACAACGACAAACA
GAGATTGAGCCAGAGCAGCCCATATCATTGGATCCAACATTGTGGCCTGA
ACTTATAAGTGACTACCCAccaatcaagaaaacgaaagcaCCAGAGAAGC
GAGCGCAACCAGCTATTGATGATCATAAGGAAGATCAATCACGTGCTGAG
TATCGTAAGAATGTTCACCAATCAATGAATTTTGTAATGCCAACACCAAA
AGCTACTCGAGATGAACATCCAAAACAATCTCCACAGAAGAAAGCGGAAC
GAAAGAGAGGGAACATCGACAGTTTCTTTCTACCAGTCGAAAAGAAAGGA
TCACCAGTCAAGCTACCTCCTGCTGCACCATCCCACAATACAACCAGGAT
ACCGTACTGCAACTTATCGAAAGAAGGGGATGAGAAAGGAGCCATGGTCT
TGTATCTGACCACCAATaagaaggaaaaagaaaagacagAAGGGAATGTG
TCAACTTCAAGTCAGCAACAACAGGTTCCAGAATCACTTCCACCACAAAC
CACACCGAAGAAAAaaacgaataaacccgacaaagaggagaaaaagaaaa
agaataagaagcaaaagaaaaaggagaaagaGTTGAATACACCCGTCAAA
CCTTTCATGAAAACTCACAAAACTGATGAAGACCAACCTGCAGCAATCAC
CCCAAAGCGCCCTAGACAACCTTCTGATCAAGAGTGGCTCTCACCTTCAC
TAGACATTGCACGAAACAAAAaaacgaataaacccgacaaagaggagaaa
aagaaaaagaataagaagcaaaagaaaaaggagaaagaGTTGAATACACC
CGTCAAACCTTTCATGAAAACTCACAAAACTGATGAAGACCAACCTGCAG
CAATCACCCCAAAGCGCCCTAGACAACCTTCTGATCAAGAGTGGCTCTCA
CCTTCACTAGACATTGCACGAAACAAAAgaAGCGAAGAATCTGAGATGAG
GAGGAGGCTGGGGAGACTTTCAACATTCCGAGGTCCCAAATATAATGAAC
ATGCAAACGAAGTAGCTGCTATTTACCAAGAAAAACATCCTGACACGATC
ATGAATTTCAATACTTGTCTGACGAAAGGAAATCGGACAGATATTCATCA
GTCTGTCAAgaAGCGAAGAATCTGAGATGAGGAGGAGGCTGGGGAGACTT
TCAACATTCCGAGGTCCCAAATATAATGAACATGCAAACGAAGTAGCTGC
TATTTACCAAGAAAAACATCCTGACACGATCATGAATTTCAATACTTGTC
TGACGAAAGGAAATCGGACAGATATTCATCAGTCTGTCAAAGAAATCAAT
CCGCGAAATACCCCTGAAGTGCAGAGTTTCCACATCACCATTCGACGATG
TTTGGCGAATCACAATTTCCCTCAATTATGTACAGATGCAAAGTCTGAAC
GAGTTGGACTTCTCAACATTCTCAAGAAGAGCTGCAAGGTGCTCAATGAG
AAATCAATCCGCGAAATACCCCTGAAGTGCAGAGTTTCCACATCACCATT
CGACGATGTTTGGCGAATCACAATTTCCCTCAATTATGTACAGATGCAAA
GTCTGAACGAGTTGGACTTCTCAACATTCTCAAGAAGAGCTGCAAGGTGC
TCAATGATCGTTTCAAGGGACAATCTTCCCCGTTGACCTTCCACGATGAG
CATCTTGCAGACTTGTTGAGGAAAGGCGTCATCAAACCTGAAGAGCAGAG
TGAAGAAACTGCTTACTCAGCAACTTATAAAGGACAGGGTGGTCGCGTTC
TTGTGTTGTTGAATTATATCGAACATTATCGCATCATTGTGTCTACAAGA
AAAGGCGATCTGAAGATCGTTTCAAGGGACAATCTTCCCCGTTGACCTTC
CACGATGAGCATCTTGCAGACTTGTTGAGGAAAGGCGTCATCAAACCTGA
AGAGCAGAGTGAAGAAACTGCTTACTCAGCAACTTATAAAGGACAGGGTG
GTCGCGTTCTTGTGTTGTTGAATTATATCGAACATTATCGCATCATTGTG
TCTACAAGAAAAGGCGATCTGAAGCGATCATTTTCAGAAGCACAAAGCAT
TGTGTGTAGCATTGAGCAAGTGTTGACACCCAAGAACCTTTCATACGCTT
TACACAAAAAGCTAGGCTACGTCAACCCTACGTCTATTGGACATGCTTTC
AATTGCCACGTGGAAGTCACCTTTCAGTGTCTCGAGCGATCATTTTCAGA
AGCACAAAGCATTGTGTGTAGCATTGAGCAAGTGTTGACACCCAAGAACC
TTTCATACGCTTTACACAAAAAGCTAGGCTACGTCAACCCTACGTCTATT
GGACATGCTTTCAATTGCCACGTGGAAGTCACCTTTCAGTGTCTCGAGGA
TAAAGATGTATGCAAGTTCCTGAATGAGGAGGGGTTCGATGTCGTCCAAA
TAAGTGATAAAGATGTATGCAAGTTCCTGAATGAGGAGGGGTTCGATGTC
GTCCAAATAAGT
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000002_pilon | genome | sc0000002_pilon:3378804..3382822 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1825-1881:3963 |
| Aaloc | 1663-1824:3474 |
| Aaloc | 1456-1662:2767 |
| Aaloc | 1297-1452:2232 |
| Aaloc | 1117-1293:1751 |
| Aaloc | 910-1113:1093 |
| Aaloc | 1-906:1 |
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