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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000235_pilon:203933..210780- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_044946 ID=XLOC_044946|Name=XLOC_044946|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=6848bp|location=Sequence derived from alignment at sc0000235_pilon:203933..210780- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTTCATAATCTTCAGACAGTTTCTTGTGATTTCATATTTTGCTTTTGT
ACATGCTGAAAGAAGTAAGTATAGTATTTTATCAACACGTGGGCGTGGGC
TGGCGGCTGAGCGTGAACAGGCGGGTTTGCCTTCACCCCGTATAATTCAC
AATGGCGTACATTTTGACAATTCTCTTGATAAGGATTTAAGTGAATGATG
CTGTGAGACCGGTTGAGTATTTGCCTGGATTTTCTATGGGTTAGTGGGCT
ATTCTACCTTCTAAGGAAAGTACATTACAGTAGTAACTGTTTACGTTATA
TAGTTCGCCACTCAGTGTTTCTTCTACAGTCACGAAAGGCTTTAAGCTCC
TTGTGTCTGATTTTTCGTCTAGGTAGTTAAATAGTGTTGAGTTTGAACTT
TGAAGGCTGGGCCTCAATGTGTTATTTTCAAATTACAATACAAAAGCGAC
CGTAGCGCGAAGGTAGTGCATCTGGTTAAAGTGCATAAGGTTGCAGGTTC
AACACCTAGCCAGGTCATATCAAAGATTACAGCAATGGTACTTTATATCT
CTCTGCTTGATGCTCAGCAACTAAAAAGACGGATCAGGGGTAAGGCCAAC
CTCGTCCCCATGTATTCCAGGCTTTATTTACGTTACTGATGGACGTCAGA
GTGGAGAGAAAAAAGCTGATAATGCGCAGGGAACGAGGTTGGGGAAAGGA
GTGACGCACCTCTACCTTCCGACAGATAGCTTGTGTAAAGGGAGTCTTTT
AAGGTCGTCCTCAATTGCGGTCGCAAATACAAACTTTACTTATTTATACT
AAAAAATCCATTATTTATTTTTTAGGTGCACTGTATGAAGCCAGTAAAGT
AGGATTTCAAAACTGGACCTTATATCACGCACATCAAGGTTATACTCTTG
AGGTAAGTGACGTCGTTTCAACGTTCATCTATCGTCCATAACATTCACAC
CATCATGCATTGGGCTTTTCCAGGAAAACATTTTACCCCCACTGTTGAGG
ATATTCACTCTTAAAAATATGCTCAAACCCCTTGATATCCTCTCTTATAA
AGATTCTTACCCCTGGATATCGCATTTTTACTTGAAAAGACACTTTATCC
CCTGAATATCCGCTCCCCTGTAGATATTTAACCACCTGGATATCCACTTT
TGAACAAAAATCGTTAACCCCCTGGATATCCGATATCCTCAACATGGGGG
GGGGCACGGGCCATTTCTGGAAACGCCCATTTGATAGCAAGGGATATCTT
CAAATTAGCCTATCATCGATTCTTTAGCATATCTGAAAACAAACTTTTAA
AAATATTTTTCCTCAAAGATTGAATGAAAGAAACCTTAGCTTCCACAAAA
CGATGTAGAATATCTATTTGCTCTATCAAGAAGGCCAAATTAACATCCTA
TTCCTAGACTATTCCCAGAGAACAATTGCGCACTTTTTGACGTCGTGCTA
ACAACTGCAATATTTTGCTTGAAATTTTGTGAATTTACGCTTTAATTTTG
CTTTTTAATTTTTACGCTTTATGTTTGTTTTTTTTTGCATTAGGAGTTTT
GGCACGAGTCTATCTAAACGATAAATCTATGGATAAAAACTGTTTTATTT
CTGGTCTCTATTCTGGTCTTTGTTTTTTTTGTTTCATTTTGTTCCATTTA
GGAGTTTGGGCACGAGTCAACGGACCAATTAGATGTAGCCATCAACCAAA
CAGAATATGAAGGTGTTCGAGCTATTTCTCCCATCATTGATATTCGGCCG
GCCTGGAAATTCTTTGTCAAGGTTGGTCTTTGTTCCTTCTAGACCATGTT
CACACGTTAGTGCTCCGTTTCGCTCCGGTATGATTTTCGTTACGGATTGG
GTGTGTTCATATTGGTTTCGGAACGTTTCGGAGCAAGAAAACGGAGCAGT
TTCGTTCCGATGAAAAAGTGGAGCGAAGTCGTTTCAATCTGTTTTGCTTT
GTAACGTCTTCTTTTTTGACGTTTTGAATTTTGACGCTCACATTTGTTTC
GGAACCGTTTCGTTTCGGAACGATACGGAACCGTAACGTCTGAACATGGT
GTAAATTGACCCTTACTTAGCTGATAGACTGGCCTTTTATTTTACAGAAT
ATATCTTGTCCAGGTTTTAGATCAAGTGCGTAATTTGCCATTGAATACTG
AGGAACAAGGCCAGAACACTCTCACCTCTTCCATTTTGTATTGTCGAATC
GATTACATACATTGCACGGCCACAGACAGGCTTCTTGAGTTTGTGTCTAC
CCACTTCCCATCACATGGCATGCCCAGGAGAAGTTACATTCACTTGCCAA
GTGATTCGCAGCACCGAGTGGGAATCAAACCCTAACCCTGACCTCCTGAC
CACAATTTCATACTAATGCTATAGTAGTTGATTCCCATAGTAGTTTAAAC
GAAATTTATAAAAGTAGAACTTGAAGGCTCAAGGGTTATACAGTAGAATC
TCTTTAACTCGAACCTCTACAACTCAAATGTCTCCTTAACTTGGACAAGT
TTTATGGTCTCTTCAGTAAATGCCTTTATAACCTTACTCCATAACTCGAA
ATTTGCTAAACTTGAACAAATTTTAGTGTTCTCGTCAGCTTTCGAGACAC
CCCTTCTTACAGACCCACTGAAAATCCTTCCCACCAGAAGAATTGGCCAA
AATATTGTTCCCAGTGGAAAATTCTGCTCTAATTTTTGTCCCCGCTGAAA
ATAATCAGATAAGCAAATCCTCAACGCAAAATATTTCCATCCCCACCAAA
TTTTCTAGCTCGAAAACAATGGAACTTAAACCCCCAGCCATAAAAAACGT
GGGAATACCAATCCCCATCGAGTTTTGGTCGGTTTTTGTTTACCCCCCTG
GCTAGTAAAATCCCATTGGGTCTATGAAAAAAGGGGTGTCTCAAGTTATG
GAATCTCCGCTGTAATCACCTTGGCAATGATTCAAACCGAGGCAGTCGTC
GCACTCAGAACAATTTAAGAAAAATACCTATTATCTCATCTTTTCTTTGT
TTTCAGTTAACAATACTAAGCAATGGTGTGCCGGTGCGCACGCGTGATCT
ATGCCCAAATGTACACGCATGCGCACAAATATCCATCATGTTGGGTTCAA
CAAAAGAATCTCTAAATGGTATTCGAAATCAACCGCAAGACCTCCAACAC
AATTTTACAAACCACGAGTTTGAGTCAGGGTATCTCTACAACACAGGTAT
TGTTAATTTTCTAATTTAACGCGTACTCTGTTTTTCAAAATAATTATTTA
TTGCCACGCGTTAAAGTTAGAGAATCTACGGTATTGTTAACTGTCTTTCT
TTTAATTTATAATTTTAAACATATTTAGTTGATTCGAATTTTTTTATAAA
TTTTTCATAACGTTGACTCCAGTGAAGTAGAATATAGCCAGACGAATCGA
ACACCGAATCAATTGAACGCAATTGAACGCAATCAAATAATTGCAATTCG
ATTGTCGAACGCAATCGAATCGCAATGGAATATTACCCAGGAATCGGCCG
TTCGATTGAGATTCGATTACGTTCGACAATCGAATCGCAATTATTCGATC
GCGTGCGATTACGTTCAATTGGTTCGATTGCGATTTTTGTTCGAAGTTGT
TCGATTGACACCGTCTGGATATAGGAGTACTTGACAAGGGCCACATTTTG
AAAAAAAATCACCAAAATATTCAAGTTACAAAAACCACTGGGAGTTGATG
AAATGTGATTTAAGAAAACAACATAACCACACAGACATACAGACATAAAG
ACAGTATTTTTAATACAAATCTTTAGAGCTGTCGGGTATGTTCTTAACTT
TTTGGGTTTTAAACCTAAAAATGTTCTTAAAATATTCCTATTTTCAGTGT
TTTCATAGTTCACGTTTTATAGTCTGCAAAGCCTTCTTAGAGTTTTGCTA
AAATTGTTGGTCTGACGTCATTTCTAACCAATAGAATGGCTAAAATGTAA
CATCTCAACTCATCTATAGAACCTGGTGTACCATTTGTGAGAATCAACGT
CCAAATTATATCCTTTGGGGACGTTCTGAAGACGTTCAACATCACTGAAT
TAGTGGTCTTGTATGATCATTGCCCTGAAACTGTACAACGTCTTGCTAGG
TAAAATCTGCTTTTGTTTTTTTTTCGTTTCGGAAAATCTGCAATAAGTTG
TACTTTTCTTCTTCTTCCTTTTCATCTTCATTTTTACACTCTGTACAATT
CTATAATATTCCACTCCTTATCTTCTTTTCAACAACGCGAAACGACCATT
CCATTCGAATTCTATCAAGAATTACAGCTTTTTGGCCCAGCTAGCTTTAG
CGTACTGGGCCTTTCATTAGCATTCTGCCCGGTGTCAGTGTGTAACAATT
TACTAGGCGATACGCGTTTTCATATATGGCGTTTTCAAGCACAGGCTAAT
TCAGATTGTGAAGGATTTGATTGGCTGTTAAAACATGATTGACAGAATAA
AAAACAATTGAAATCGTCTTTATTGGTTAAAAACATAAAAGGAGAAAATA
CAATTAACTATTAAAACTATAAGAACATAACAGATGTAGTGTGTTTTAAG
AAAAACAATGTAACAAACCGTGACAAACCTTCTTCTCTTTAGGAAGATGT
TCTTTTAAAAAAAAGTTGTTTTTACATTTCTCTATCATGTGAACAGTTCA
GTTGTTCACGTGTTAGGAAAAAAACATCTCTGTATATAAGATTTAAATAT
TATGAATTATTTCTTATTTTTGTAAATAAGAGATAGCCGAATGGTCTAAG
GCGTCTATGGCTTGTATTAGCGACTCCAGGTTCAAATCCCCTCTGCTACT
CAAGTCTTGTTCAGTTCATACTTTTATTCGCTGGGCCTTCATGCCCTCTG
GGCTTCTTGTTTTGTCTTCACTTTATATTGAAAAAGTACAAATTTGAAAT
CAGAAATCTTGAAAGCTTGAAAAGAAAGAATGTGTAAATATAAATATTTT
AGATAAATCTTCGTTTTGTTCATTTTTGAAAAATTCCCTCACTCAAAATT
ATCTTTCCTGATGGACTACGGTGAAATAAATAGAATCACAAAATACTTTT
AAGAAAATTCGATAAATTCCAAGCGACGGATCAAGAAATAAAGAACTATT
CACTTACTTACATTTGCTACACGGTGTTCCATGCTGGTGCAATCTTCGGC
CAATACAGCATTGGCCTCGATGAGACGATTGAAGTGAGGGGACTAAGACT
CTGCATGGCCCCCGGCGTGCGAATCGAATTGAGGGGGCCAAAAAAATATG
TCGCCCACCATGGTTGGACGACGAAGAAAATTTTCGACTTTTTACCCTTA
TTTCACCCTTCTAAACGGTATATATAAGATTTTTTGAAGTAAAAAAAACA
ATTACTTAGCAAAATATTGGGGAGGCCATGGCCCCCCACCCCCCCCCCCC
CCCCGGTGACGGGGCCATGCTCTGAGAAAAAAATTGTCTATCAAGAAGAT
TAATCTGCTAAAAATAGAGGGAGCTATGACCCGCTTTCCCTGTGTAGACG
GGAAAATGCAGTGTAGACACCTTTTCGACCGTAGTCGCGCGGTCAGGCGC
GTGCTTCGATCCAATCCTTTTTTTACACCTTTTTTCTATTGACTATAGGT
GCGAAAAAAGATTGGGACGGTTTTAGGGTGGTAAAACGGACAAAAAATAC
CCGCTCGGTAGTTGGCGGCTACGGCCGAAAAGGCGTATTGTAGACTTTAT
TTTATTTATGAAAAAGGTTAATCAATATTAAACCGACTTACCGCACTTTG
TTTCTTTTTGTCTAGATATCCAAACATCCCTGCATCACAACACGAAGATA
GAAGGATAGAAACCAAAGGAGAATGTATTGAGAATGCTATTCTTGACAAC
CCACAAGACCATTTGCTGAGGTTTTGTGATCACCAGGCGAAAGCCAGTTT
CTTTGGCTCATGTATTTGCAGTGCAGGATATGAAGATGTTTTGAATAAAT
GTCAAGGTACAATCTGCGTCAAAATATATTGAGAAATTTGGTTATTTCCT
CAAAAAAGTCGCTCTTGGACTATTTGTAAATTGTGATCGAATATTTCAAT
TTGGGAGGGCTTTATAGACTTCCAGGCTATATTCTGAGCCCTAATGGACC
ATACTTGATTTTTTTATCTTCATTTTCTAAGGTCTTAAGTCTTAAAACTC
AGGGTTAAAGCTCACCCTACCAACCTAAGTTAGAGCGCTTTCAAATCGTT
TGTGGCTACAAGATTTAGAGGGAATTACTACAATTTGTGTAATCTAAAAC
ATTGTCCATCCCTAGCTAGAAAGTGGTAAAGAATAGTCTCTGTAATTCGA
CTCTTTTTCTAGCTGGATTCGAAGAAAATACTCGATATCTGAATACCAAA
TCGGGGAGAGTCAATTACAGTAGAATTTCGCTTATTCGAACTTCTATTAC
TCGAATCTTCCTAAAATTCGAACTTGTTTCCAGTCCCCGTCAAGGAGAAA
CCTTCTTAACTCTCTGTAGTTCGAAAAAATAAGATTCCCCTTTCGAGTTC
GAATGAGCAAGAACCAACTGTATATGTATTTTTCTTCCCGGGATTTGGGT
TTATAGACAGCTGGCACAAAACATTGTTTCAACGTTAATCTAACGTTATA
TAGACGTTATAATATAAACATTAGATGGACGTTGAAACAACGTTCTTTGC
CAGCTGTATAGATGTACGGTTTGTCTTTTAGAATGCAGAGGCGGCTACTT
TAGAAAATCCATCACATCTCCAAAATGTTCCAAGTGTGGACAGAACACTG
ATGTACTTCCAGGGAGGATTTTTTGTCAGTGTAAACAGACCCCTATACGT
TATCACCGGTTTCAACATGAGAAAGGTCGCAGTGAAAAGCCATGCTAC Coding sequence (CDS) from alignment at sc0000235_pilon:203933..210780- >XLOC_044946 ID=XLOC_044946|Name=XLOC_044946|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1878bp|location=Sequence derived from alignment at sc0000235_pilon:203933..210780- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTTCATAATCTTCAGACAGTTTCTTGTGATTTCATATTTTGCTTTTGT
ACATGCTGAAAGAAATGTTCATAATCTTCAGACAGTTTCTTGTGATTTCA
TATTTTGCTTTTGTACATGCTGAAAGAAGTGCACTGTATGAAGCCAGTAA
AGTAGGATTTCAAAACTGGACCTTATATCACGCACATCAAGGTTATACTC
TTGAGGTGCACTGTATGAAGCCAGTAAAGTAGGATTTCAAAACTGGACCT
TATATCACGCACATCAAGGTTATACTCTTGAGGAGTTTGGGCACGAGTCA
ACGGACCAATTAGATGTAGCCATCAACCAAACAGAATATGAAGGTGTTCG
AGCTATTTCTCCCATCATTGATATTCGGCCGGCCTGGAAATTCTTTGTCA
AGGAGTTTGGGCACGAGTCAACGGACCAATTAGATGTAGCCATCAACCAA
ACAGAATATGAAGGTGTTCGAGCTATTTCTCCCATCATTGATATTCGGCC
GGCCTGGAAATTCTTTGTCAAGTTAACAATACTAAGCAATGGTGTGCCGG
TGCGCACGCGTGATCTATGCCCAAATGTACACGCATGCGCACAAATATCC
ATCATGTTGGGTTCAACAAAAGAATCTCTAAATGGTATTCGAAATCAACC
GCAAGACCTCCAACACAATTTTACAAACCACGAGTTTGAGTCAGGGTATC
TCTACAACACAGTTAACAATACTAAGCAATGGTGTGCCGGTGCGCACGCG
TGATCTATGCCCAAATGTACACGCATGCGCACAAATATCCATCATGTTGG
GTTCAACAAAAGAATCTCTAAATGGTATTCGAAATCAACCGCAAGACCTC
CAACACAATTTTACAAACCACGAGTTTGAGTCAGGGTATCTCTACAACAC
AGAACCTGGTGTACCATTTGTGAGAATCAACGTCCAAATTATATCCTTTG
GGGACGTTCTGAAGACGTTCAACATCACTGAATTAGTGGTCTTGTATGAT
CATTGCCCTGAAACTGTACAACGTCTTGCTAGAACCTGGTGTACCATTTG
TGAGAATCAACGTCCAAATTATATCCTTTGGGGACGTTCTGAAGACGTTC
AACATCACTGAATTAGTGGTCTTGTATGATCATTGCCCTGAAACTGTACA
ACGTCTTGCTAGATATCCAAACATCCCTGCATCACAACACGAAGATAGAA
GGATAGAAACCAAAGGAGAATGTATTGAGAATGCTATTCTTGACAACCCA
CAAGACCATTTGCTGAGGTTTTGTGATCACCAGGCGAAAGCCAGTTTCTT
TGGCTCATGTATTTGCAGTGCAGGATATGAAGATGTTTTGAATAAATGTC
AAGATATCCAAACATCCCTGCATCACAACACGAAGATAGAAGGATAGAAA
CCAAAGGAGAATGTATTGAGAATGCTATTCTTGACAACCCACAAGACCAT
TTGCTGAGGTTTTGTGATCACCAGGCGAAAGCCAGTTTCTTTGGCTCATG
TATTTGCAGTGCAGGATATGAAGATGTTTTGAATAAATGTCAAGAATGCA
GAGGCGGCTACTTTAGAAAATCCATCACATCTCCAAAATGTTCCAAGTGT
GGACAGAACACTGATGTACTTCCAGGGAGGATTTTTTGTCAGTGTAAACA
GACCCCTATACGTTATCACCGGTTTCAACATGAGAAAGGTCGCAGTGAAA
AGCCATGCTACAATGCAGAGGCGGCTACTTTAGAAAATCCATCACATCTC
CAAAATGTTCCAAGTGTGGACAGAACACTGATGTACTTCCAGGGAGGATT
TTTTGTCAGTGTAAACAGACCCCTATACGTTATCACCGGTTTCAACATGA
GAAAGGTCGCAGTGAAAAGCCATGCTAC
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000235_pilon | genome | sc0000235_pilon:203933..210780 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 769-933:166 |
| Aaloc | 577-765:1083 |
| Aaloc | 448-573:2878 |
| Aaloc | 334-444:3765 |
| Aaloc | 262-333:3843 |
| Aaloc | 142-261:5198 |
| Aaloc | 67-141:6022 |
| Aaloc | 1-63:6849 |
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