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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000002_pilon:3397569..3403041- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_044932 ID=XLOC_044932|Name=XLOC_044932|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5473bp|location=Sequence derived from alignment at sc0000002_pilon:3397569..3403041- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAAGGTTGTAACCCTGCTACTTGCATGTGTGGTGGTAGCACAATGTCA
TTCCACACTTCACCAGGATGAAACGAGTAAGTGTTGTTTAATTTACGTCT
TTCCCCAGGCCTAAAAAAGGAGAAATATTTTCATGCGTGACGATAGTTAA
CTCTTTTAATCATTAGTATGTGGAACATTTTCAAACTATCAGCCAACTTG
TATTAAAGATTATAATTTTGTTTCTATTTCAGAATTAGACGAAGATTTGG
CAAAATTAACAAAGATGGTGTTGGGACGCTGGAAGAATAAAAGATCCCAC
AGGTCTTCTCGTCGCACTTCAATACCAAGAGGTGAGTGATTTGAAGTTTC
TAACGTAATCCGCCCAATTTTCGCCTTAACACAGGGAATAGGGCAAAAGT
AAGGTTCACGCGTTAAGGGTCAAACATATTTTTTATATCTTATTTTTCCC
AAGAGTCAAAATTCAGTGTCGTTATTTTTTTAAACATTTCTCGTTTTTTT
ATCAGAATGTCCTGTCAAAGTCGGTGCACGTCGTAACTGTCAGAAAGAGC
GACTGACCGATATCGCAAGAGCTCGATATTGGTACAAAATTTCCGATGAA
AACACCAACATTGATTTTCCTTTGGCTTCAACGATTCCCTGGTTAGCGCA
GAATCTATCTGAAACCAAATATTATTACGCCTTGGATCCATTTGAATCGA
GACATTTAGTGCTTCTTCAAACGTGGACAAACATATTGCTAAACACCGTC
TTCCCTGGTTTAACTGCTGCTTTTAACACGACTTCTTTCGAAAGCCCGCA
AGAATATGCGATTGCTTATAAAGCATGGCAGCAATCTGTTCAGGTGAGAA
AATCTTTTTCTTAATTGTCCTCTTCATCTGTGCGCTTTTCTATTTGCACA
ACTTGAACAAATGATTTTGTTGTGTCCCGATATTACTTATCTTTTCAATC
ACATTGAGAGTTTTCTAGAACATTTCTGGAAGTTTTATTCTCTCCGACAT
TTCATGTTTAAAAATAAATTATTCACTTCTTCTTTTGGTGTAGGCGACAA
AAGCACCACAATATTTTGCCAACCCATCGCAATTCCCTACAATCACAGAC
CATGTTTTGACGGGTCACTGGCAAACTGACGAGGCGTTTACTCAACGAAG
ATTGACTGGTCAATGTCCCTACTTCTTGAAGAAAGTCGTTGATGATGAAG
GTACCTTGAAGAAATCTTCATGAGATGATTTTTCTTTTTTTTCTTATTTC
GTATGCCCCTTATCAGGGAAAACTTCGTCGGGAAAAAGTGACGAAATTTT
GGATAAGTGACGAATATTTTCCCTGACGAAAATTTTCCCCGGCCTTAATG
CGTTTACCAACTACCAGCAAGTGACGAATTTTTCCCCGACGAAAATTTTC
CCCAACGAAGTTTTAAAGAAGTGAACACTACCATATGCTAACCTTCCTCC
ATATCTTCTTTTTAAATTCAATAACAGAAAAATATTTCTTCTTACAGATG
GCAAAGGCTACCACGTGGACGATTTGAAACCTTTAGTCAACACCAAATTC
TTTGAAGACTTTGAAATGAAATATTCTGCTACAGAATCTGTGTCTATTGA
ACAGGTAATTACAATTTAATTCTTCCAGAAATACTTTTTTATTAAACTAT
TGCTTTCGCGACGAGTATAAATTTAGAACAGCCCCCCCCCTCCCCCTAGC
GGTAACTCTGATCACGATATGACACAATTGTTTGTCTTCAATCATGATCA
CGAAGTCCAAAAAGTCCAAATCACGTATCATGGCTCAAAAAATTTTTACG
TTTCGTGTAATCACGTTTTGACCTCTGATCACGCAATCACGCAAAAAAAA
ATCCAAATCACGTAATCACGCTACAAAAAAGTCCTTATCACGTCATCACA
CAAACCGTTCGGGGGGCTCTTAGAACCCAGTCATTATTGTGCTGCCTTAA
ATCAAATAGAGAAAGATTCAACTTTTCAAAACTTTGTATTTATTTTTTAT
TTATAGGCGATTGAGGACGGCCGATTGTTTGTACTTCACATCCCTGAAAT
GGTGGGCATTAAAAACGTACCCGACGTATTCGCACCGCTATTGCAAGATC
GCAAACTTGCTGACGTCAAGTCACCGATATCGTTCTTTGTGTTGGGAGAT
GACGGACTTTTACACGTAGTTGCGATCCAAAGAAATCCTGTTCAAAGTAT
GTTTGAACTCTATCTTTGATTAGGTATGGGATTTGAGTGGAAGAGGAAAC
TTGATCCAAGTAACTACTGACGAAAACATCTTTTCTCGATTGTAATTCTA
TAAAACAAAAAAAGATTTCTTTCCGCACAATCACTTTACAAAGCACTGAG
ATAATAAACTGAAAGCTAGTATTTAAAACTTTTCTTTTTTTCCAGCATCC
GAAGTTGATACACCAGAAAGTTCCAATTGGCTTTTAGCTAAAGGAGAAGC
TGAGATGGCATCAGACCTTTATTGTCAAGCTAAAATACATCTCGGAGAAG
TCCATTTTGTGTCCACCATCTACTGTTTGTCCTTTAGACGTCATTTGAGC
ACCAAGCACCCCCTCTATGATTTCTTTAAGCACCATTGTGAAGGGACTGT
CCCTCATATCACCACAGTCTTTGAGACTTTGACCACACCCAATGCTGCGG
GTAGTGTCATCTACGGAACCGGGAATCAAGGTTTTCTTGATTTGTCGCAA
AAAGCTTTTGCAGAACGAGATTATGAAAGCAACACTTATGAAGATTTCAT
TGAGGTAAGAACAATGCGTAAAGGCGTTTTACCTTTATTAAGATTTGACC
TGGGGTAGTTTTTTAAACTAAATGGCTTATGCAAAATTGTAAATTTACTC
ATAATATGATCTAGAATGCGTACATAATATTTCTTACCGACTTTGAAACT
ATCCCTTAGAATCTTGTTTTAAAGAATCCAATATTTTGCGTTTCCAGGGT
AACGGTTTGGATGACGAGGACATTAAATATTACCCTTTCCGTGATGACGT
CAAAGAAATTATGAAAGAATACGAGACTTTCATCGATGACATCATCAAGA
CTTATTACAGAAGAGGAAGAATTCACAGGGACGCTGAATTACAATCATGG
GCTAACGAGTTGTCGCCTGAAGGAACGGTTCAACCTGATGCTGGGCGAGG
AAAGGTGTGGAATGTGTTTAAATGTCACCAAACCCATGTCTCATTTTCCA
AATTAAAGCTTTTCAACTGGATATTATTTGTTTACCAGGGTTTAATTTTT
GGGTTTTTTTCCCAGTGCGTAACAGGTCTGCGTTGGCTTTGAGAGTGTAT
TACCAAACTCGAAACTCAAGACAATGTTTTGCTAAAAATGAAGAGTTTCA
ATTTTTGACCTTCTTCCTTACATGTATCTCTTTGAATACACTTCCGACAC
CTGAAATTTGTTTTCGCGCTTATATTTTCTTCTTCTTCTTCCCAGCCAAT
ATCTCTATTGTTATTTCATTTAGATGAAAGGTTTTCCAGCAAAGTTCGAA
ACATGCGATCAGTTGAGGACGTTCTTAAAACGCTTTCTGTGGATTAACTT
GTTCCACACTTCAGCAAATTATCCTGATTACAGAGATTTCATGCCAACTT
CACCCACTAGACTTTATCAAAATCTAGATGGAACAGACCTGCCCTTATTG
AAAGCTCTTACTGGGAAACTTTACAATGTTGTGAGTATATTATGGAGGCC
CCCCCAGCGGACCCAAAATTCACGCCATCACGCCAATTTTTTTTCGATTT
CACGCCATCACGCCTGAAAAATTTGATTTTCACGATCACGCCAATTTCTT
TCGATTTCACGCCATTACGCCTAGAAAATTTATTTTCATGCTCATAATTT
TTGTTATATATAAACACAAATAGGTATGTGCTTGGTCGTTAATCAGTTTT
TCATCGGCATTCTCATACGCGTAAGCAAGTCAAGATTATATCATTTTTCC
TATCGGAAACACCCGAAAAATCTGGAAGAAATTTGACATCTGTTTTTCTA
TTTTTAGTAATACACAGGGGTAAATTCCAGTTTTTTCGGGTGTTTCCGAT
AGGAAAAATGACGTAATCTTGACTTATGCATATAAAACATTGTTGGACAA
CTGGTCACATCAAAGGGCACCGGTTTGAGTAAATTGACAAAGCCCACCAT
GGTTGGGTAACGGAGAAAATTTTTGAATTTTGAAGGGTTCAAAGTGCTAT
TTTGGGATCCATTTCAATTCAATTTGAAAAATAACTCATGTAAAAATAAT
GGAAATCTTTTAAAAGTACATTAATTGTGAATTAGCGTGAAAAGTTTTCA
AAAGGGGAACGAGGAGGCGCAACCATGGTTTGCACCGACAGGAGAAATTT
TTAATTTAGTATGGCTAAAATCGCCCTCATTTACTCTCTTTTTTTCCAAA
ATATGGTTTAAACATCACAGATTCTTTTGATCAATCTGCTTAAGTTACAC
CCTCATAATAAACCTGTTGCTTCTTTCTGTTTATGGCTTTGCTACAAATG
TATATTTTCCTGAAATAAAGGACCTGATGTCTTGGATGCATCTAAGAATA
AGCATCTAAGAAAGAGAGGGAAATGTTAGTTACGGAGAAAGCGCAACCAT
GGTTTTCGCTGACGGGAAAAAATTTCAATTTTCGACCCTCTCATAGCATT
CGACTTTATTTTGAAGACTAGCTAGCAACTGCTAAAAACAATCAGAAGTT
ACAAGGATAAATGACAGATGAATAGAACTGTTTGCACCGTTTCTTTTATG
TTTTAAAATGAAATCTAATCTATAGGAGGCCCCACCATAGTTAGGGCCGA
CCAAGAAAATTTTGAAATTTAAACCCTCTAAATTGGCTAAAATGGACATA
GAAATACAATTCAACTAATAAATATAATTTCACGATCACGCTGAACTGAA
AATTTCACGCCATCACGCCTAAAAAATCTCGATTTCACGATCACGCCGGC
ACTTCATTTTCACGCCATCACGCCGTTTTTTTTCAAAATTTCACGCCATC
ACGCCACGAAAAACCCTCCATCACGCCATCACGCCAACCGCTGGGGGGGC
CTCATTATGTGGTTTTCATTTGAAGACTTTCAAACTATCAGCTGAAAGTT
GAGTAAACCAATAGGGTGTTTTATATCTACAAATCCTAGGTTATAACTTA
GACCGTTTACAGGGCTTGGTCGCTTGGCCGCATGGGTTTTGTTAATACCA
TATCTATATAATTAATTTGAAAATTAAATTCCTTTTCAGCAATATATGAT
GTTCAGAGGTTTGCTGGCCAATTTCCGAGTGAACAGGATTTTCTCATACT
GGAAAGATATCACAAACCCGACATACCGACGAATTGTGCGCAAAGCTTTT
TATCGCTTGAACACCATCGTCCAAAAGAAGCTAGAAACAAGAAATGCTGA
ACGTAAAGCCAAAAATCAATTGGGTTATCAAATCATGGAACCAAAATGGC
TGACAAATAGCGTCCATATTTGA Coding sequence (CDS) from alignment at sc0000002_pilon:3397569..3403041- >XLOC_044932 ID=XLOC_044932|Name=XLOC_044932|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3948bp|location=Sequence derived from alignment at sc0000002_pilon:3397569..3403041- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAAGGTTGTAACCCTGCTACTTGCATGTGTGGTGGTAGCACAATGTCA
TTCCACACTTCACCAGGATGAAACGAATGAAGGTTGTAACCCTGCTACTT
GCATGTGTGGTGGTAGCACAATGTCATTCCACACTTCACCAGGATGAAAC
GAAATTAGACGAAGATTTGGCAAAATTAACAAAGATGGTGTTGGGACGCT
GGAAGAATAAAAGATCCCACAGGTCTTCTCGTCGCACTTCAATACCAAGA
GAATTAGACGAAGATTTGGCAAAATTAACAAAGATGGTGTTGGGACGCTG
GAAGAATAAAAGATCCCACAGGTCTTCTCGTCGCACTTCAATACCAAGAG
AATGTCCTGTCAAAGTCGGTGCACGTCGTAACTGTCAGAAAGAGCGACTG
ACCGATATCGCAAGAGCTCGATATTGGTACAAAATTTCCGATGAAAACAC
CAACATTGATTTTCCTTTGGCTTCAACGATTCCCTGGTTAGCGCAGAATC
TATCTGAAACCAAATATTATTACGCCTTGGATCCATTTGAATCGAGACAT
TTAGTGCTTCTTCAAACGTGGACAAACATATTGCTAAACACCGTCTTCCC
TGGTTTAACTGCTGCTTTTAACACGACTTCTTTCGAAAGCCCGCAAGAAT
ATGCGATTGCTTATAAAGCATGGCAGCAATCTGTTCAGAATGTCCTGTCA
AAGTCGGTGCACGTCGTAACTGTCAGAAAGAGCGACTGACCGATATCGCA
AGAGCTCGATATTGGTACAAAATTTCCGATGAAAACACCAACATTGATTT
TCCTTTGGCTTCAACGATTCCCTGGTTAGCGCAGAATCTATCTGAAACCA
AATATTATTACGCCTTGGATCCATTTGAATCGAGACATTTAGTGCTTCTT
CAAACGTGGACAAACATATTGCTAAACACCGTCTTCCCTGGTTTAACTGC
TGCTTTTAACACGACTTCTTTCGAAAGCCCGCAAGAATATGCGATTGCTT
ATAAAGCATGGCAGCAATCTGTTCAGGCGACAAAAGCACCACAATATTTT
GCCAACCCATCGCAATTCCCTACAATCACAGACCATGTTTTGACGGGTCA
CTGGCAAACTGACGAGGCGTTTACTCAACGAAGATTGACTGGTCAATGTC
CCTACTTCTTGAAGAAAGTCGTTGATGATGAAGGCGACAAAAGCACCACA
ATATTTTGCCAACCCATCGCAATTCCCTACAATCACAGACCATGTTTTGA
CGGGTCACTGGCAAACTGACGAGGCGTTTACTCAACGAAGATTGACTGGT
CAATGTCCCTACTTCTTGAAGAAAGTCGTTGATGATGAAGATGGCAAAGG
CTACCACGTGGACGATTTGAAACCTTTAGTCAACACCAAATTCTTTGAAG
ACTTTGAAATGAAATATTCTGCTACAGAATCTGTGTCTATTGAACAGATG
GCAAAGGCTACCACGTGGACGATTTGAAACCTTTAGTCAACACCAAATTC
TTTGAAGACTTTGAAATGAAATATTCTGCTACAGAATCTGTGTCTATTGA
ACAGGCGATTGAGGACGGCCGATTGTTTGTACTTCACATCCCTGAAATGG
TGGGCATTAAAAACGTACCCGACGTATTCGCACCGCTATTGCAAGATCGC
AAACTTGCTGACGTCAAGTCACCGATATCGTTCTTTGTGTTGGGAGATGA
CGGACTTTTACACGTAGTTGCGATCCAAAGAAATCCTGTTCAAAGCGATT
GAGGACGGCCGATTGTTTGTACTTCACATCCCTGAAATGGTGGGCATTAA
AAACGTACCCGACGTATTCGCACCGCTATTGCAAGATCGCAAACTTGCTG
ACGTCAAGTCACCGATATCGTTCTTTGTGTTGGGAGATGACGGACTTTTA
CACGTAGTTGCGATCCAAAGAAATCCTGTTCAAACATCCGAAGTTGATAC
ACCAGAAAGTTCCAATTGGCTTTTAGCTAAAGGAGAAGCTGAGATGGCAT
CAGACCTTTATTGTCAAGCTAAAATACATCTCGGAGAAGTCCATTTTGTG
TCCACCATCTACTGTTTGTCCTTTAGACGTCATTTGAGCACCAAGCACCC
CCTCTATGATTTCTTTAAGCACCATTGTGAAGGGACTGTCCCTCATATCA
CCACAGTCTTTGAGACTTTGACCACACCCAATGCTGCGGGTAGTGTCATC
TACGGAACCGGGAATCAAGGTTTTCTTGATTTGTCGCAAAAAGCTTTTGC
AGAACGAGATTATGAAAGCAACACTTATGAAGATTTCATTGAGCATCCGA
AGTTGATACACCAGAAAGTTCCAATTGGCTTTTAGCTAAAGGAGAAGCTG
AGATGGCATCAGACCTTTATTGTCAAGCTAAAATACATCTCGGAGAAGTC
CATTTTGTGTCCACCATCTACTGTTTGTCCTTTAGACGTCATTTGAGCAC
CAAGCACCCCCTCTATGATTTCTTTAAGCACCATTGTGAAGGGACTGTCC
CTCATATCACCACAGTCTTTGAGACTTTGACCACACCCAATGCTGCGGGT
AGTGTCATCTACGGAACCGGGAATCAAGGTTTTCTTGATTTGTCGCAAAA
AGCTTTTGCAGAACGAGATTATGAAAGCAACACTTATGAAGATTTCATTG
AGGGTAACGGTTTGGATGACGAGGACATTAAATATTACCCTTTCCGTGAT
GACGTCAAAGAAATTATGAAAGAATACGAGACTTTCATCGATGACATCAT
CAAGACTTATTACAGAAGAGGAAGAATTCACAGGGACGCTGAATTACAAT
CATGGGCTAACGAGTTGTCGCCTGAAGGAACGGTTCAACCTGATGCTGGG
CGAGGAAAGGGTAACGGTTTGGATGACGAGGACATTAAATATTACCCTTT
CCGTGATGACGTCAAAGAAATTATGAAAGAATACGAGACTTTCATCGATG
ACATCATCAAGACTTATTACAGAAGAGGAAGAATTCACAGGGACGCTGAA
TTACAATCATGGGCTAACGAGTTGTCGCCTGAAGGAACGGTTCAACCTGA
TGCTGGGCGAGGAAAGATGAAAGGTTTTCCAGCAAAGTTCGAAACATGCG
ATCAGTTGAGGACGTTCTTAAAACGCTTTCTGTGGATTAACTTGTTCCAC
ACTTCAGCAAATTATCCTGATTACAGAGATTTCATGCCAACTTCACCCAC
TAGACTTTATCAAAATCTAGATGGAACAGACCTGCCCTTATTGAAAGCTC
TTACTGGGAAACTTTACAATGTTATGAAAGGTTTTCCAGCAAAGTTCGAA
ACATGCGATCAGTTGAGGACGTTCTTAAAACGCTTTCTGTGGATTAACTT
GTTCCACACTTCAGCAAATTATCCTGATTACAGAGATTTCATGCCAACTT
CACCCACTAGACTTTATCAAAATCTAGATGGAACAGACCTGCCCTTATTG
AAAGCTCTTACTGGGAAACTTTACAATGTTCAATATATGATGTTCAGAGG
TTTGCTGGCCAATTTCCGAGTGAACAGGATTTTCTCATACTGGAAAGATA
TCACAAACCCGACATACCGACGAATTGTGCGCAAAGCTTTTTATCGCTTG
AACACCATCGTCCAAAAGAAGCTAGAAACAAGAAATGCTGAACGTAAAGC
CAAAAATCAATTGGGTTATCAAATCATGGAACCAAAATGGCTGACAAATA
GCGTCCATATTTGACAATATATGATGTTCAGAGGTTTGCTGGCCAATTTC
CGAGTGAACAGGATTTTCTCATACTGGAAAGATATCACAAACCCGACATA
CCGACGAATTGTGCGCAAAGCTTTTTATCGCTTGAACACCATCGTCCAAA
AGAAGCTAGAAACAAGAAATGCTGAACGTAAAGCCAAAAATCAATTGGGT
TATCAAATCATGGAACCAAAATGGCTGACAAATAGCGTCCATATTTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000002_pilon | genome | sc0000002_pilon:3397569..3403041 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1741-1974:235 |
| Aaloc | 1534-1740:2001 |
| Aaloc | 1327-1533:2527 |
| Aaloc | 970-1326:3077 |
| Aaloc | 778-966:3468 |
| Aaloc | 673-777:3975 |
| Aaloc | 514-669:4431 |
| Aaloc | 178-513:4967 |
| Aaloc | 79-174:5240 |
| Aaloc | 1-75:5474 |
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