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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000036_pilon:744247..748094- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_044902 ID=XLOC_044902|Name=XLOC_044902|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3848bp|location=Sequence derived from alignment at sc0000036_pilon:744247..748094- (Clytia hemisphaerica_ch_hm2_pilon)
ATGACTGTAGACTTGAATCTCTGGTTGTCAAACATTTTGAAGAGATTCCC
TCTACTCAGTAAAAGCAGTTTACCAGATTCGTTAGAACACCTTAAAAATG
TTTTAAGGATTATTGTCTTTAGCGTGCATGTTTCAGTGCCAATAACAAGC
ACGAACTGGGTGGAGTATATTACAAAAGCTATAGAAACAGTCTCTACAAC
AGACAATGTATTGTTCTATTCAACCAATCAGCTACCAGCTTTCAAATCGA
CTGATCCGAAGTTTGACAAACTCATACTCTGGGGAGGATACGGAACAGGA
AAAAGCCTCTTGCTACGGGAAAAGGCATTACAGTTGAGCCGTCAGGACCC
ATCGTTTCATGGTCGCATCATGTATGTCCACTGCAATTTATTTGACAACA
ATCGAAGTCTTCAAGTATCATACTTAAAGAATATGTTGGAGCCGCATGGA
ATCATTGTAAAATCTTTTGTTCCGGTAAGATTAAGAATAATTAAAAGTTA
TCGCACGGTACCGAGTGCAATATGGGATATATTTTTCGAGTTCAGATTTT
TCGTGTTATTTTCCGAGCCTTTAGGCAAGAGAGTTTAGAGAAAAATATTT
ATCCAATATTGTTCGAGCAGAAGTGTTATACCGGGTGTGCCAAAAAAAAT
AGGCCTAAAATTGAAACTTTGACGTAACTTTTTTCAGTTAGAATAGAAAC
TTGAAATTTTACATGCGTCTTTAGCAACCTATTTCGAAGCTTTACGCAAA
GTTTCATTTGTACAGCTTTAGTAGTTTCAAAGATATGGAGATTTTCCTAA
AGGATGTGAAAATGTGTTTGTTTATAGATTTGACGTCAAAACAAAAAAAT
TGTCAACCACAGTTCCCTAACGTTTAGTATCCGAACCGGAGTTGCGTTTG
TTTATTTCAGTTTTTGTTTTGGAATCAGAAAGATGCAATTGCAGTGTTAT
TTTAAAAGATGACATTCTATTGCAAAATGGTTTTACTTACTAACGTTCAA
GACAACATGCATTTCTAACCATTACTGAAGAAAAATCGCCACAAGACAGA
TTGAAGAATGGCACTTCTTTCTGACGAAGACAAGGTGATTATCAGACATT
ATATCGAGAAAGAGTATACAGCTTATGAGATATGGAAGCTGAACCCAGCA
AAGAACTGGCATTATTCAAAAGTTAAACGTGCCGGAAAATCTATGAAGCA
ATTTGTTGGTCGTGTTCGCACTGTTGGTGAATGTAATGGTTCCTCAATTA
AGATGCATTATTCGTGAACTCAAATCTCGGATTTACTCATTATATTTTTT
GTCTTTATATTAGTTTTATCATCAAAAGTACTGCTTTGTAAAAAGTGAAT
TTATCTTCAGAAAAAAAACTGACGTCAGTCAAATCTATAAACAAGCACAT
TTTCACATCCTTTAGGAAAATCTCCATATCTTTAAAACTACTAAAGCTAT
AAGAATGAAACTTTCAGGAAAGCTTCGAAATAGGTTGCTTAAGACGCATG
TAAAATTTCAAGTTTCTATTCTAACTGAAAAAAGTTACGTCAAAGTTTCA
ATTTTAGGCCTATTTTTTTGGCACACCCGGTATAACTTGTTTATCGTCAA
CTTGAAAAATATCGACAAAGTCTTTTCTCTTTCTATTTGTCTTTTTTCTT
TGTTTCGTTTATTTCTTTTAAGTTCTTGTATATTGATAAAAATCAACATC
AAAACATTCGAAAATGATTCTAATATAGTCATTAAAAATATCAATATATT
CTTTGGGACAACTTTTATGTGTATTGAGAAAGAGGGACGATTGCTCATAT
TTCATGTTGACGATAATAAGCAGATATTCAATAGGTAAAAGTTGGTTATT
GAGATTAATTAACCCAAGGTGATGTAATATTCAACGAGGCGAAGCCGAGT
TGAATATACATCACCGAGGGTCAATAAATCCAATAACCAACGAAAACCTA
TTGAATATATGTTTTATTATATACCTAGAGGCAAAAGCAAAGCATTAATT
ATGTCAATAGTCGAATGTTTCACATAAAACTTCTTTTCCTTAATCGAATG
TTTCTTTTTTAATGATTTTCTTGATTACTTTGAGTCATAAAAATTTGTTA
ATGAAATTGACAATAGATTTATTTCAATAAATTTCTTTGATAAACAACAA
GAGTGACACAAAAAATCTAACTTTGAAAGCAAAATCAAACAAGAAATTCT
ACCGTGGTTATAATAGCCATGATATATCATGAATTATTCAATGGCTGTTT
TTGCCTACAGGTATATAAATTTGTGTTATCAATATTTTTTACACCGAGCA
GATTCTGATAGCCTGCGCACAGCACGTATTCATTTTAGATGTCGTGGCTA
CGTGTGAGACTCTGCCTAGGCTAGCGGACCGTTTTGATCCTTTTCATCAA
GATTTGTGGTGAATGAGCTTTAAAATGGACTTTAGAGCGCGGTGATTGGC
TAATGCAAATCATTGCACCAAAACAAACGTCAATCACAAACATAAAGATT
AGAACACATCGTCTCTTTCGCTTTAGTTTTTGTTTTCAAGTAAAAGGCAA
CGCAATGAACTGATTTTGAGACTAAAAAAAGAGGTCATCCTCTTATGCTG
ACAAAATAGAATAAACGAAAGAATTTCCATGAATGTTTTTACTTTTATCT
CAAAATGCTGTGGAAAATGAGCAAAGGGAATCAAAATTCATGGAATATTA
AAAAGAGATGTTTGATCTGTTCTTATTTTAGAACAGAAGCAGTTTATGTG
TACCAGCATTGGAAAATACTACTAAAGATGAAGATGAAGAAGATTTGATA
AAGATTGTTATTCCCGACAATTGGAAATTATTGCCGAAGTTTTTTTTTAG
TTAGTTTTTACTTTAGTTTTCGTTTCCAAGTAAAAGGCAACGTAATGATT
TGAGAATAAAAAAGCTACATGCTCCATTCTCTTAAGCTGACAAAGTAAAA
TATACGAAAGAATTTAGGAGAAAGAATGCGTTCTTTTTTTTTATCTCAAG
ATGCTGTGGAAAATGAGCAAAGGGAATCAAAATTCAATAGTCCCTGGAAT
ATTAAAGACATGTTTGATCTGTTTTTATTTTAGAAGAGAAGCAGTTTATG
TGTACCATCATTGGATTCATTGGAAATTACTGAAGATGAAGATGACGAAG
ATTTGACAGAGATGGTCACAAAGAACAACATCAAGGCCATCTTTCTCGAC
GAGTGGAAAATATTTCCAAAGGAAGAAATTGAGAAAATGATTTCACTGGT
CGAAATCTGCTGGATTGCTCCAGGCATTGAGGAGTATTGTTATGATGCTA
GAAATATATCACAAGAATTGAGGATGAATTTTGAATTTCTAGATTTAAAA
TTGAATCTACGCAACAGCAGAAAGATCGTTGAAACATCCATGATGCTTAA
CCAGGAGTATGAACGTGAAACCTCATATGATCATGCAGGTATCACACTGC
CTCCACAGAATTTCCCTTGTGGCCAACCATCTGTTTTTGCAGACTCTCTG
GAGAAAGCTATTGCAATGGCAAGAAAATTTACAAAAGGTGGAATATTGGT
TATTACTGCACCTGATGATGCATGTATCGAGACTTTCATGCAGAGCACTG
GTGAAAAATGGAAGTTGAATAGTGATCTTACAGAGACTGAGGATCCTTAC
AAGCTTCTGACGGAGGGATATATTCTATTTGTTAATTGTTGCAAAAATGT
GACAGGATTTGAATGGCCAGTTGTCATTTGCACTCCTTATGATGATATCA
CTATCAGTCTTGAAGGTATAAACTACCATCGTAGAAACATTTTTATGCGA
TGCACTACTTACCTTATTGTAATATCAAAACGTCAGACGCAATACTGA Coding sequence (CDS) from alignment at sc0000036_pilon:744247..748094- >XLOC_044902 ID=XLOC_044902|Name=XLOC_044902|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2706bp|location=Sequence derived from alignment at sc0000036_pilon:744247..748094- (Clytia hemisphaerica_ch_hm2_pilon)
ATGACTGTAGACTTGAATCTCTGGTTGTCAAACATTTTGAAGAGATTCCC
TCTACTCAGTAAAAGCAGTTTACCAGATTCGTTAGAACACCTTAAAAATG
TTTTAAGGATTATTGTCTTTAGCGTGCATGTTTCAGTGCCAATAACAAGC
ACGAACTGGGTGGAGTATATTACAAAAGCTATAGAAACAGTCTCTACAAC
AGACAATGTATTGTTCTATTCAACCAATCAGCTACCAGCTTTCAAATCGA
CTGATCCGAAGTTTGACAAACTCATACTCTGGGGAGGATACGGAACAGGA
AAAAGCCTCTTGCTACGGGAAAAGGCATTACAGTTGAGCCGTCAGGACCC
ATCGTTTCATGGTCGCATCATGTATGTCCACTGCAATTTATTTGACAACA
ATCGAAGTCTTCAAGTATCATACTTAAAGAATATGTTGGAGCCGCATGGA
ATCATTGTAAAATCTTTTGTTCCGATGACTGTAGACTTGAATCTCTGGTT
GTCAAACATTTTGAAGAGATTCCCTCTACTCAGTAAAAGCAGTTTACCAG
ATTCGTTAGAACACCTTAAAAATGTTTTAAGGATTATTGTCTTTAGCGTG
CATGTTTCAGTGCCAATAACAAGCACGAACTGGGTGGAGTATATTACAAA
AGCTATAGAAACAGTCTCTACAACAGACAATGTATTGTTCTATTCAACCA
ATCAGCTACCAGCTTTCAAATCGACTGATCCGAAGTTTGACAAACTCATA
CTCTGGGGAGGATACGGAACAGGAAAAAGCCTCTTGCTACGGGAAAAGGC
ATTACAGTTGAGCCGTCAGGACCCATCGTTTCATGGTCGCATCATGTATG
TCCACTGCAATTTATTTGACAACAATCGAAGTCTTCAAGTATCATACTTA
AAGAATATGTTGGAGCCGCATGGAATCATTGTAAAATCTTTTGTTCCGAA
CAGAAGCAGTTTATGTGTACCAGCATTGGAAAATACTACTAAAGATGAAG
ATGAAGAAGATTTGATAAAGATTGTTATTCCCGACAATTGGAAATTATTG
CCGAAGTTTTTTAACAGAAGCAGTTTATGTGTACCAGCATTGGAAAATAC
TACTAAAGATGAAGATGAAGAAGATTTGATAAAGATTGTTATTCCCGACA
ATTGGAAATTATTGCCGAAGTTTTTTAAGAGAAGCAGTTTATGTGTACCA
TCATTGGATTCATTGGAAATTACTGAAGATGAAGATGACGAAGATTTGAC
AGAGATGGTCACAAAGAACAACATCAAGGCCATCTTTCTCGACGAGTGGA
AAATATTTCCAAAGGAAGAAATTGAGAAAATGATTTCACTGGTCGAAATC
TGCTGGATTGCTCCAGGCATTGAGGAGTATTGTTATGATGCTAGAAATAT
ATCACAAGAATTGAGGATGAATTTTGAATTTCTAGATTTAAAATTGAATC
TACGCAACAGCAGAAAGATCGTTGAAACATCCATGATGCTTAACCAGGAG
TATGAACGTGAAACCTCATATGATCATGCAGGTATCACACTGCCTCCACA
GAATTTCCCTTGTGGCCAACCATCTGTTTTTGCAGACTCTCTGGAGAAAG
CTATTGCAATGGCAAGAAAATTTACAAAAGGTGGAATATTGGTTATTACT
GCACCTGATGATGCATGTATCGAGACTTTCATGCAGAGCACTGGTGAAAA
ATGGAAGTTGAATAGTGATCTTACAGAGACTGAGGATCCTTACAAGCTTC
TGACGGAGGGATATATTCTATTTGTTAATTGTTGCAAAAATGTGACAGGA
TTTGAATGGCCAGTTGTCATTTGCACTCCTTATGATGATATCACTATCAG
TCTTGAAGGTATAAACTACCATCGTAGAAACATTTTTATGCGATGCACTA
CTTACCTTATTGTAATATCAAAACGTCAGACGCAATACTGAAAGAGAAGC
AGTTTATGTGTACCATCATTGGATTCATTGGAAATTACTGAAGATGAAGA
TGACGAAGATTTGACAGAGATGGTCACAAAGAACAACATCAAGGCCATCT
TTCTCGACGAGTGGAAAATATTTCCAAAGGAAGAAATTGAGAAAATGATT
TCACTGGTCGAAATCTGCTGGATTGCTCCAGGCATTGAGGAGTATTGTTA
TGATGCTAGAAATATATCACAAGAATTGAGGATGAATTTTGAATTTCTAG
ATTTAAAATTGAATCTACGCAACAGCAGAAAGATCGTTGAAACATCCATG
ATGCTTAACCAGGAGTATGAACGTGAAACCTCATATGATCATGCAGGTAT
CACACTGCCTCCACAGAATTTCCCTTGTGGCCAACCATCTGTTTTTGCAG
ACTCTCTGGAGAAAGCTATTGCAATGGCAAGAAAATTTACAAAAGGTGGA
ATATTGGTTATTACTGCACCTGATGATGCATGTATCGAGACTTTCATGCA
GAGCACTGGTGAAAAATGGAAGTTGAATAGTGATCTTACAGAGACTGAGG
ATCCTTACAAGCTTCTGACGGAGGGATATATTCTATTTGTTAATTGTTGC
AAAAATGTGACAGGATTTGAATGGCCAGTTGTCATTTGCACTCCTTATGA
TGATATCACTATCAGTCTTGAAGGTATAAACTACCATCGTAGAAACATTT
TTATGCGATGCACTACTTACCTTATTGTAATATCAAAACGTCAGACGCAA
TACTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000036_pilon | genome | sc0000036_pilon:744247..748094 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 589-1353:766 |
| Aaloc | 475-588:1118 |
| Aaloc | 1-474:3849 |
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