|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000022_pilon:451778..454510+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_044839 ID=XLOC_044839|Name=XLOC_044839|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2733bp|location=Sequence derived from alignment at sc0000022_pilon:451778..454510+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAATGCGTCAACTTCAACATTGAAAGTGACTGTGAATGGGAAGAAATA
TCTCATCACTGGCATACAGAAAGAGACTTCGTGTAAAGGTTTACTATGTG
CCATCGCTAAAGTCACCAGTCTGGAGGATAGTAGCATCCAATCCTATAGT
CCACGATCAAGTGATATTTCAAATGAGAATTTATTAGAACGTTTTAAAGG
TGATCGGAAACAAGCAGGTGATTTGACTTCGTTCAATGTTTTCAACACTT
TGGCCAAAGATGCGAAAATCATAGCAAAGGAGAGTAGTTTAAATCGTAAG
GAAGCTCCACAAGAACCTGGACATTCgaaacattcatccaaacataaaag
taagaaacacaaacacgaaaaagaaacaaaaattaaggaagataaggaga
aaaagaaggataaaaaatcgaaacaaaaacatcgaaagaaagagaCGTTA
ACGACAACCACGACCACACTCACCACACGTACGACCGAAACTAAGATCAA
ACACAAAGTTAAACATCGCAGCGTCGACGATTCTGATATCGAATCATACA
AAAGAGACAATCTAAAACGTATGAAAAACAAGCGAAGGACGTACGACGAT
TCTGATCTAGATACGTATAAAACTCTTCAAAATATCGTCAACgaccaaaa
caaaaaactacATCGAATTCAGAGTTCATCAAGAGAAGTCAAGAAAGCTG
CTTGGATGAAAGAGTTAAAGAGAAACTCGCAGATTTATTACATTGATGAT
CAACCAGAACTTTTAGAGCTTGGAGAACAAGCTgtaaaaatgactgaaaa
cgaaagttgttcTCTTGAAAAAGACGATGGAAATGATTCTGGCCTCCCGT
CGCCAGAATACGACTCCTCAGAGTCAACAGAAaaccaaccaatcaaaatt
ataGAAACGGTACCATTATTAATAAATGATAACAATAACAATGAGAAATA
TCCGATTGCAAGTAAACCAAAACAGTCTATTGTTAACGATCAAAACAAAA
GCCAAATAGAACAATCAGAGGGGGGTATTTTACCGAACGTAGATAGCGTG
AATGTCTCGAACAATAGAGAGAAAAGTTGTAATTCAATATCAGCAGAGGA
AAGAATTTCTCTATCGACAAACGGATTaaaaaaaGAGACTTTGAACGAAA
ACAGTTGTGAGGTTGATGAAAGGACGAGAAGTGAAATTAAAGGGGATGAG
CTGAACGAAATCTCAAACGCGTTGGATGCAAGCCACAACACGGTGAATGG
TGATACGAATACAAAAGATATTCCACAACAACATATGGTTGATGCTGTAA
ACGAgactaaaataaagaaatcgACTTTGACACCTGTTCAACAAGAATTA
TATAAAACTATGATGATTGATAagaataagaatattttgaaagactCTGA
TACTTGTGAGAGGGAGGTCAGTAAGATGGTAGCCTTCAATGATGCCTTGT
TTAAAAGCTCAAACCCTTCCACCACCAACGGTATTGGCAAAAAGATGGAg
aagaagaaattcaagaaatgtGATATTTCGGATCCAGTTTTATTGAGTCC
GACCACGTTGAAGAAACATCATAATGTGAAAAAGGTTCAGTCAGTGTTGG
GAAAGAAAGCGGCAGACGTGTTGAGACAAGACGTTGTCAGGAAGTCTTTC
ATTGGAAGTGTTTCTAAACCGACCTCAACGACTGAGAATAAGGAGGTCac
taaagagaaagaaaaatattttaacaaaaaacttaAAGAGATTCGCTCTA
AAGGTTCAAGTAAAAAATCCAAACTGAAAGATAGTAAAAAAGAGCCTGAG
TATTTCTCGAAAAGTCAATTTGTAGAAAAGCCATTAACGAACAGTAATGA
GGATGAAATTAATACCAAATTAAATCATAATGGCAAAGCATTATCTACTA
ATAACTCAATATTAGAGGATGTTGTCGATGGGCAGATCACTGGACAACAA
GTAGCGAATAATCCTATCCGCGAAAAGGACAGTCAGTCTGTCCAAGATCT
CGACAAACACTCAGAGGAGATGTTGGAGGCTCGTTTACGTCAAGAAAGTC
TCAATGAGAGCGATGTGTTAAAAGCTGATGAAATATTAAACGAAATTCTG
GAATAtgagaaaaacattaaaaatgaaCTAGACCAAATTATACAAAACGA
TGAGACTTTGAGGAAGGAAGAACAGACTGCAACTTTAAATCAAGGGGAGA
ATTTTTCATCGAAATCTGCGAAAGTAAACAATGATGAGTCATCTATAAAA
GAAATGGCTAAAGATGAAGAACAAATACATTTCGAactaattgaaaaata
tttggaagaaaaacaaactttagatgAAATTGAACAGAAATTGAACGAAT
ATAATTACGCTATAACGCGGCTACAAGAGGAGATATTTTTAATCGATCTT
GAGTCAAAGGAACCTAAAACACTTACTGATCTTGATGAAGAGGAGCTTTA
TGtttcaaatgaaattgaaaacgtAAAAAGTCTCATCAAGTCAGTTATCG
ATTTAACGAACTACCAACGGAAAGAGATGTCCGAAAATATGGAACTTATA
GACCAGATGGATCTTGATTATCGGACGCAGAAGGCTAATTATGATAATTT
AAGAAATGGTACTTGGAAAACGAACTCTAAATCAGCGCCCAGGTCTTTGA
TTAAGAATGCTAAAGTGAAAAGGAAGAATTCACTTATAGCCGAGGCGAAC
GGGACTTCAAATAGTAGAAGTAATTTTGTTTAG Coding sequence (CDS) from alignment at sc0000022_pilon:451778..454510+ >XLOC_044839 ID=XLOC_044839|Name=XLOC_044839|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=5466bp|location=Sequence derived from alignment at sc0000022_pilon:451778..454510+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAATGCGTCAACTTCAACATTGAAAGTGACTGTGAATGGGAAGAAATA
TCTCATCACTGGCATACAGAAAGAGACTTCGTGTAAAGGTTTACTATGTG
CCATCGCTAAAGTCACCAGTCTGGAGGATAGTAGCATCCAATCCTATAGT
CCACGATCAAGTGATATTTCAAATGAGAATTTATTAGAACGTTTTAAAGG
TGATCGGAAACAAGCAGGTGATTTGACTTCGTTCAATGTTTTCAACACTT
TGGCCAAAGATGCGAAAATCATAGCAAAGGAGAGTAGTTTAAATCGTAAG
GAAGCTCCACAAGAACCTGGACATTCgaaacattcatccaaacataaaag
taagaaacacaaacacgaaaaagaaacaaaaattaaggaagataaggaga
aaaagaaggataaaaaatcgaaacaaaaacatcgaaagaaagagaCGTTA
ACGACAACCACGACCACACTCACCACACGTACGACCGAAACTAAGATCAA
ACACAAAGTTAAACATCGCAGCGTCGACGATTCTGATATCGAATCATACA
AAAGAGACAATCTAAAACGTATGAAAAACAAGCGAAGGACGTACGACGAT
TCTGATCTAGATACGTATAAAACTCTTCAAAATATCGTCAACgaccaaaa
caaaaaactacATCGAATTCAGAGTTCATCAAGAGAAGTCAAGAAAGCTG
CTTGGATGAAAGAGTTAAAGAGAAACTCGCAGATTTATTACATTGATGAT
CAACCAGAACTTTTAGAGCTTGGAGAACAAGCTgtaaaaatgactgaaaa
cgaaagttgttcTCTTGAAAAAGACGATGGAAATGATTCTGGCCTCCCGT
CGCCAGAATACGACTCCTCAGAGTCAACAGAAaaccaaccaatcaaaatt
ataGAAACGGTACCATTATTAATAAATGATAACAATAACAATGAGAAATA
TCCGATTGCAAGTAAACCAAAACAGTCTATTGTTAACGATCAAAACAAAA
GCCAAATAGAACAATCAGAGGGGGGTATTTTACCGAACGTAGATAGCGTG
AATGTCTCGAACAATAGAGAGAAAAGTTGTAATTCAATATCAGCAGAGGA
AAGAATTTCTCTATCGACAAACGGATTaaaaaaaGAGACTTTGAACGAAA
ACAGTTGTGAGGTTGATGAAAGGACGAGAAGTGAAATTAAAGGGGATGAG
CTGAACGAAATCTCAAACGCGTTGGATGCAAGCCACAACACGGTGAATGG
TGATACGAATACAAAAGATATTCCACAACAACATATGGTTGATGCTGTAA
ACGAgactaaaataaagaaatcgACTTTGACACCTGTTCAACAAGAATTA
TATAAAACTATGATGATTGATAagaataagaatattttgaaagactCTGA
TACTTGTGAGAGGGAGGTCAGTAAGATGGTAGCCTTCAATGATGCCTTGT
TTAAAAGCTCAAACCCTTCCACCACCAACGGTATTGGCAAAAAGATGGAg
aagaagaaattcaagaaatgtGATATTTCGGATCCAGTTTTATTGAGTCC
GACCACGTTGAAGAAACATCATAATGTGAAAAAGGTTCAGTCAGTGTTGG
GAAAGAAAGCGGCAGACGTGTTGAGACAAGACGTTGTCAGGAAGTCTTTC
ATTGGAAGTGTTTCTAAACCGACCTCAACGACTGAGAATAAGGAGGTCac
taaagagaaagaaaaatattttaacaaaaaacttaAAGAGATTCGCTCTA
AAGGTTCAAGTAAAAAATCCAAACTGAAAGATAGTAAAAAAGAGCCTGAG
TATTTCTCGAAAAGTCAATTTGTAGAAAAGCCATTAACGAACAGTAATGA
GGATGAAATTAATACCAAATTAAATCATAATGGCAAAGCATTATCTACTA
ATAACTCAATATTAGAGGATGTTGTCGATGGGCAGATCACTGGACAACAA
GTAGCGAATAATCCTATCCGCGAAAAGGACAGTCAGTCTGTCCAAGATCT
CGACAAACACTCAGAGGAGATGTTGGAGGCTCGTTTACGTCAAGAAAGTC
TCAATGAGAGCGATGTGTTAAAAGCTGATGAAATATTAAACGAAATTCTG
GAATAtgagaaaaacattaaaaatgaaCTAGACCAAATTATACAAAACGA
TGAGACTTTGAGGAAGGAAGAACAGACTGCAACTTTAAATCAAGGGGAGA
ATTTTTCATCGAAATCTGCGAAAGTAAACAATGATGAGTCATCTATAAAA
GAAATGGCTAAAGATGAAGAACAAATACATTTCGAactaattgaaaaata
tttggaagaaaaacaaactttagatgAAATTGAACAGAAATTGAACGAAT
ATAATTACGCTATAACGCGGCTACAAGAGGAGATATTTTTAATCGATCTT
GAGTCAAAGGAACCTAAAACACTTACTGATCTTGATGAAGAGGAGCTTTA
TGtttcaaatgaaattgaaaacgtAAAAAGTCTCATCAAGTCAGTTATCG
ATTTAACGAACTACCAACGGAAAGAGATGTCCGAAAATATGGAACTTATA
GACCAGATGGATCTTGATTATCGGACGCAGAAGGCTAATTATGATAATTT
AAGAAATGGTACTTGGAAAACGAACTCTAAATCAGCGCCCAGGTCTTTGA
TTAAGAATGCTAAAGTGAAAAGGAAGAATTCACTTATAGCCGAGGCGAAC
GGGACTTCAAATAGTAGAAGTAATTTTGTTTAGATGAATGCGTCAACTTC
AACATTGAAAGTGACTGTGAATGGGAAGAAATATCTCATCACTGGCATAC
AGAAAGAGACTTCGTGTAAAGGTTTACTATGTGCCATCGCTAAAGTCACC
AGTCTGGAGGATAGTAGCATCCAATCCTATAGTCCACGATCAAGTGATAT
TTCAAATGAGAATTTATTAGAACGTTTTAAAGGTGATCGGAAACAAGCAG
GTGATTTGACTTCGTTCAATGTTTTCAACACTTTGGCCAAAGATGCGAAA
ATCATAGCAAAGGAGAGTAGTTTAAATCGTAAGGAAGCTCCACAAGAACC
TGGACATTCgaaacattcatccaaacataaaagtaagaaacacaaacacg
aaaaagaaacaaaaattaaggaagataaggagaaaaagaaggataaaaaa
tcgaaacaaaaacatcgaaagaaagagaCGTTAACGACAACCACGACCAC
ACTCACCACACGTACGACCGAAACTAAGATCAAACACAAAGTTAAACATC
GCAGCGTCGACGATTCTGATATCGAATCATACAAAAGAGACAATCTAAAA
CGTATGAAAAACAAGCGAAGGACGTACGACGATTCTGATCTAGATACGTA
TAAAACTCTTCAAAATATCGTCAACgaccaaaacaaaaaactacATCGAA
TTCAGAGTTCATCAAGAGAAGTCAAGAAAGCTGCTTGGATGAAAGAGTTA
AAGAGAAACTCGCAGATTTATTACATTGATGATCAACCAGAACTTTTAGA
GCTTGGAGAACAAGCTgtaaaaatgactgaaaacgaaagttgttcTCTTG
AAAAAGACGATGGAAATGATTCTGGCCTCCCGTCGCCAGAATACGACTCC
TCAGAGTCAACAGAAaaccaaccaatcaaaattataGAAACGGTACCATT
ATTAATAAATGATAACAATAACAATGAGAAATATCCGATTGCAAGTAAAC
CAAAACAGTCTATTGTTAACGATCAAAACAAAAGCCAAATAGAACAATCA
GAGGGGGGTATTTTACCGAACGTAGATAGCGTGAATGTCTCGAACAATAG
AGAGAAAAGTTGTAATTCAATATCAGCAGAGGAAAGAATTTCTCTATCGA
CAAACGGATTaaaaaaaGAGACTTTGAACGAAAACAGTTGTGAGGTTGAT
GAAAGGACGAGAAGTGAAATTAAAGGGGATGAGCTGAACGAAATCTCAAA
CGCGTTGGATGCAAGCCACAACACGGTGAATGGTGATACGAATACAAAAG
ATATTCCACAACAACATATGGTTGATGCTGTAAACGAgactaaaataaag
aaatcgACTTTGACACCTGTTCAACAAGAATTATATAAAACTATGATGAT
TGATAagaataagaatattttgaaagactCTGATACTTGTGAGAGGGAGG
TCAGTAAGATGGTAGCCTTCAATGATGCCTTGTTTAAAAGCTCAAACCCT
TCCACCACCAACGGTATTGGCAAAAAGATGGAgaagaagaaattcaagaa
atgtGATATTTCGGATCCAGTTTTATTGAGTCCGACCACGTTGAAGAAAC
ATCATAATGTGAAAAAGGTTCAGTCAGTGTTGGGAAAGAAAGCGGCAGAC
GTGTTGAGACAAGACGTTGTCAGGAAGTCTTTCATTGGAAGTGTTTCTAA
ACCGACCTCAACGACTGAGAATAAGGAGGTCactaaagagaaagaaaaat
attttaacaaaaaacttaAAGAGATTCGCTCTAAAGGTTCAAGTAAAAAA
TCCAAACTGAAAGATAGTAAAAAAGAGCCTGAGTATTTCTCGAAAAGTCA
ATTTGTAGAAAAGCCATTAACGAACAGTAATGAGGATGAAATTAATACCA
AATTAAATCATAATGGCAAAGCATTATCTACTAATAACTCAATATTAGAG
GATGTTGTCGATGGGCAGATCACTGGACAACAAGTAGCGAATAATCCTAT
CCGCGAAAAGGACAGTCAGTCTGTCCAAGATCTCGACAAACACTCAGAGG
AGATGTTGGAGGCTCGTTTACGTCAAGAAAGTCTCAATGAGAGCGATGTG
TTAAAAGCTGATGAAATATTAAACGAAATTCTGGAATAtgagaaaaacat
taaaaatgaaCTAGACCAAATTATACAAAACGATGAGACTTTGAGGAAGG
AAGAACAGACTGCAACTTTAAATCAAGGGGAGAATTTTTCATCGAAATCT
GCGAAAGTAAACAATGATGAGTCATCTATAAAAGAAATGGCTAAAGATGA
AGAACAAATACATTTCGAactaattgaaaaatatttggaagaaaaacaaa
ctttagatgAAATTGAACAGAAATTGAACGAATATAATTACGCTATAACG
CGGCTACAAGAGGAGATATTTTTAATCGATCTTGAGTCAAAGGAACCTAA
AACACTTACTGATCTTGATGAAGAGGAGCTTTATGtttcaaatgaaattg
aaaacgtAAAAAGTCTCATCAAGTCAGTTATCGATTTAACGAACTACCAA
CGGAAAGAGATGTCCGAAAATATGGAACTTATAGACCAGATGGATCTTGA
TTATCGGACGCAGAAGGCTAATTATGATAATTTAAGAAATGGTACTTGGA
AAACGAACTCTAAATCAGCGCCCAGGTCTTTGATTAAGAATGCTAAAGTG
AAAAGGAAGAATTCACTTATAGCCGAGGCGAACGGGACTTCAAATAGTAG
AAGTAATTTTGTTTAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000022_pilon | genome | sc0000022_pilon:451778..454510 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1-2733:1 |
|
