XLOC_044712 (mRNA) -

Overview
NameXLOC_044712
Unique NameXLOC_044712
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000239_pilon:426255..427248-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_044712 ID=XLOC_044712|Name=XLOC_044712|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=994bp|location=Sequence derived from alignment at sc0000239_pilon:426255..427248- (Clytia hemisphaerica_ch_hm2_pilon)
CGTGTAACCAAACCAGCTTATTTCACAATTTCTGGAGAAAATAAGGTAAA TTCTTTTGCTGCTAGTTCTTTAGAAGAATTTGAAGAGTTTGAGAGATATT GGAATAAAATCTATTTTTCAAAATTACAAACTTCTATTCAAAAAAACTTC TAATGCAAATGGTTTAAAAGGAATATATCAAATTTTACAGGTAGAACTCA TGAAGGGATTTGGTGTTTATTTACACCGAGAGACCATATGCAATGCTCAT TTACTACCTGAAACTGATACATGTGTGGCGTACTTGATGAAAAGGTATTC AGCTTGGCTTTGTGCATTAATTATTACTAGTAATCACAGATTTGCATTTT ACAGAAAAAATTGAAAGGGCAAATCAGTTTATTTCAAGTTTTTTCACAAA ATTAAATTTATATTGAAACTTTCTTGAAACTTTTGGAAATTAAATCAAAA TTTCGTTGTTCTTAGAATGTTTTCCCAGCAGGAACTGGTAATTTTGAATG TAACAGGTGCGAATGGTCATTCTCCAATATCAAAAAATGTTGTGAATGCA ATACTAGGTATGTAAATGCATGAAAAGAAGCTGTAAATTTACCTTAAGGG AATTAATTCTACGAAATGCAATTTTTACCATTAATTCTCGAAAATTCCTT AATAAAATGAAAGAATTTCGACAAAATTTGGTGTCAACGGCAAAAATTAG TCTCGCTATATACGTTGATTTTATATTTGCACCAATTTTTAACCAAGTTA ACTTCCTTTAATACTTTCTCCCTTAACATAGTTTTGTGTATTCTTCACAT TTGTTCTTATTTTAGGGTTCTGTTTGGCTTTCACCCACGAAGGTTGTGGA AGAAAGAAAGACAAACAGCAGTCAAAACTAACCCTTCCTAAACTTCATAG GTACATCGCAGGTACCATTCAAACAGCCCGCAACTATTTGAAGGAAGGAA AGGATTGGAAAGTCAAATCTGAAGAAGAGGAGTACACGCAGTAG

Coding sequence (CDS) from alignment at sc0000239_pilon:426255..427248-

>XLOC_044712 ID=XLOC_044712|Name=XLOC_044712|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=840bp|location=Sequence derived from alignment at sc0000239_pilon:426255..427248- (Clytia hemisphaerica_ch_hm2_pilon)
CGTGTAACCAAACCAGCTTATTTCACAATTTCTGGAGAAAATAAGCGTGT
AACCAAACCAGCTTATTTCACAATTTCTGGAGAAAATAAGGTAGAACTCA
TGAAGGGATTTGGTGTTTATTTACACCGAGAGACCATATGCAATGCTCAT
TTACTACCTGAAACTGATACATGTGTGGCGTACTTGATGAAAAGGTAGAA
CTCATGAAGGGATTTGGTGTTTATTTACACCGAGAGACCATATGCAATGC
TCATTTACTACCTGAAACTGATACATGTGTGGCGTACTTGATGAAAAGAA
TGTTTTCCCAGCAGGAACTGGTAATTTTGAATGTAACAGGTGCGAATGGT
CATTCTCCAATATCAAAAAATGTTGTGAATGCAATACTAGAATGTTTTCC
CAGCAGGAACTGGTAATTTTGAATGTAACAGGTGCGAATGGTCATTCTCC
AATATCAAAAAATGTTGTGAATGCAATACTAGGGTTCTGTTTGGCTTTCA
CCCACGAAGGTTGTGGAAGAAAGAAAGACAAACAGCAGTCAAAACTAACC
CTTCCTAAACTTCATAGGTACATCGCAGGTACCATTCAAACAGCCCGCAA
CTATTTGAAGGAAGGAAAGGATTGGAAAGTCAAATCTGAAGAAGAGGAGT
ACACGCAGTAGGGTTCTGTTTGGCTTTCACCCACGAAGGTTGTGGAAGAA
AGAAAGACAAACAGCAGTCAAAACTAACCCTTCCTAAACTTCATAGGTAC
ATCGCAGGTACCATTCAAACAGCCCGCAACTATTTGAAGGAAGGAAAGGA
TTGGAAAGTCAAATCTGAAGAAGAGGAGTACACGCAGTAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_044712XLOC_044712-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000239_pilongenomesc0000239_pilon:426255..427248 -
Properties
Property NameValue
Aaloc244-420:178
Aaloc151-240:529
Aaloc46-147:805
Aaloc1-45:995