XLOC_044671 (mRNA) -

Overview
NameXLOC_044671
Unique NameXLOC_044671
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000053_pilon:940817..942112+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_044671 ID=XLOC_044671|Name=XLOC_044671|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1296bp|location=Sequence derived from alignment at sc0000053_pilon:940817..942112+ (Clytia hemisphaerica_ch_hm2_pilon)
CTTGGTATAGGAAGTCATCGAAGCTGTCTTGCTATTGACAGTGGGACCGA GGCTGAAGGTGACGGAGAAAACAATATGACCAATGTCCCTTTTTCAGACG AGGAATCAGAAATATCCGGAGAAGATGGAGAAAACGAAGAAGATGATGTA CCCGATTTCCCTCGCCAATACTCTTCTCCTCAGAGTGGGCTATCAATAAA ACCGTTAGTTGTACAGTATTATCTTTTCGTAGCTTAAAAAATTGCTTGAC TTACCTAACTAACGAAAATGGGAAATAATCGAAAAACAGCTTCTCTGATT GCTAGAGTTTTAGGATTGtttctttttaagaatttttttcttcaagctTT AATTAAATTTCCCGCTAAATAAAAAACCCACTATACCTCTTCTCTGcttt atttttcaatcaaagaattgaaaacgtagtatctttttatttagaaccga aacaaattttaaattaaCATCATCGAGGAATACTGCTAGAAATGATAGGt aataaaaagtttatttttacttGTTGTTATAAGTgtcattttaaaaagtt gtaccaAGACTTTCTTTTAATCTTAAAAATGTTTCCATTCTATGTAAATT ATTTATGAGAAATATCCTTGCATCATGATGAGatcaaatttttatatgaa aaaaagcttttcagTCCTTCGAGAGTTCAAGATAGGGAGTAAAAAATGCT GTTGTTTACTGGATTAACCCAGaacgatttattttttattagatcCAGTT TGGATATTGGGCAAGGAACAACGACGCAAGATCAATCGTTAGAATTAGTT ACCCAATCTGCCCATACTTCAGGACATGAACAATCTCCAGTCTTGTAAGA ATCTACAAATTGACTTTCATTGGGTCTAAACGTTTGCTAACTATATCACC TGTCCACGTCTCAATCAGTtaatgaaatattcttacatttCTTACATAAA GCCGGTTTTAGCTTTGTATTGGTTTCAAAGACTCCCACACGAGCAGGGCA TTCCAAATTAGCTTTAGAGAAATTAAATGGGTCAGAAATTTCGGTCAAAC AATCTaagtaaatatttatttttatgctCTTTTAGACCACACAATCTTCT AAACAAATCGGCCAACAGTTTACGAAGCAAACTCAAATTATAAAGTACAC CGCCACATTTTCAAAAGTCACCGCATACCCCAAATAAATCACAACGAAAT TCCCCGACTATCACATTGTCTGGTAAAACGAAATCGCCACACGTCCATAA CAATAATTCAACATTTAATAGTGTTAAAAGAACGTCATCAAGAAAA

Coding sequence (CDS) from alignment at sc0000053_pilon:940817..942112+

>XLOC_044671 ID=XLOC_044671|Name=XLOC_044671|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1140bp|location=Sequence derived from alignment at sc0000053_pilon:940817..942112+ (Clytia hemisphaerica_ch_hm2_pilon)
CTTGGTATAGGAAGTCATCGAAGCTGTCTTGCTATTGACAGTGGGACCGA
GGCTGAAGGTGACGGAGAAAACAATATGACCAATGTCCCTTTTTCAGACG
AGGAATCAGAAATATCCGGAGAAGATGGAGAAAACGAAGAAGATGATGTA
CCCGATTTCCCTCGCCAATACTCTTCTCCTCAGAGTGGGCTATCAATAAA
ACCCTTGGTATAGGAAGTCATCGAAGCTGTCTTGCTATTGACAGTGGGAC
CGAGGCTGAAGGTGACGGAGAAAACAATATGACCAATGTCCCTTTTTCAG
ACGAGGAATCAGAAATATCCGGAGAAGATGGAGAAAACGAAGAAGATGAT
GTACCCGATTTCCCTCGCCAATACTCTTCTCCTCAGAGTGGGCTATCAAT
AAAACCaaccgaaacaaattttaaattaaCATCATCGAGGAATACTGCTA
GAAATGATAGaaccgaaacaaattttaaattaaCATCATCGAGGAATACT
GCTAGAAATGATAGatcCAGTTTGGATATTGGGCAAGGAACAACGACGCA
AGATCAATCGTTAGAATTAGTTACCCAATCTGCCCATACTTCAGGACATG
AACAATCTCCAGTCTTatcCAGTTTGGATATTGGGCAAGGAACAACGACG
CAAGATCAATCGTTAGAATTAGTTACCCAATCTGCCCATACTTCAGGACA
TGAACAATCTCCAGTCTTACCACACAATCTTCTAAACAAATCGGCCAACA
GTTTACGAAGCAAACTCAAATTATAAAGTACACCGCCACATTTTCAAAAG
TCACCGCATACCCCAAATAAATCACAACGAAATTCCCCGACTATCACATT
GTCTGGTAAAACGAAATCGCCACACGTCCATAACAATAATTCAACATTTA
ATAGTGTTAAAAGAACGTCATCAAGAAAAACCACACAATCTTCTAAACAA
ATCGGCCAACAGTTTACGAAGCAAACTCAAATTATAAAGTACACCGCCAC
ATTTTCAAAAGTCACCGCATACCCCAAATAAATCACAACGAAATTCCCCG
ACTATCACATTGTCTGGTAAAACGAAATCGCCACACGTCCATAACAATAA
TTCAACATTTAATAGTGTTAAAAGAACGTCATCAAGAAAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_044671XLOC_044671-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000053_pilongenomesc0000053_pilon:940817..942112 +
Properties
Property NameValue
Aaloc547-756:1087
Aaloc445-543:744
Aaloc391-441:446
Aaloc187-387:1