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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000104_pilon:370236..374539- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_044606 ID=XLOC_044606|Name=XLOC_044606|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4304bp|location=Sequence derived from alignment at sc0000104_pilon:370236..374539- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTCTGATGAAGAAGTTCTTGATGGATTCTTTGCCAAAAAAGACAAATC
CAAAAAACCAAAGAAAAAGAAGAAGACTAAAACAGAGACTGTAATCACTA
CTCAATCTGAATCACAGGCTGCTAAAGTAAGTTTCCTATTTTTTAAATGA
AGCAAGTTTAAAATTTAAAAGTAATTTATGCCTGTAATCTTAGCTGTATA
ATTGATGCTGCTGCTATGTTATTGAAAATTTCCAGTTATTTTAGTACCCG
AGAAAATTTGGTTTGGAACTGTAGAATCTTTTGGCTTTTAAAACAATTTT
TAAAACGGTGTAGATGAGAAGTTTGTTGTTAATTCTCTTAATTAAAATGA
TGGATGTTGGGCTTAATAACTTTTTTCTTGGTAGGTTGATGAATGGAAAG
ATTTTGAGGAGAAAAAGGAAAAGGATTTTTCAAATTTGAAGATTGCTGAT
TTACAGGGCGGGTAAGTAAAGAATCTCAATACTTCAAAATCTAGTAGAGC
AGAAACCGAAAAATTTTTTTTTTGGCTCTGGAATTGTCAAATGTAACATT
CATTTTTGTTTTCTTTGCTCAGTGATGAAAATGATAAGGACGAACAAGAA
TATCAACAAAATGATGAAGATGACGTCGACGGTATTTCTTGTTTTCTTGT
ATTTTAGGGATAATAATTTTTTGAAAACCATCCCTGTAATCAATTTCCTT
TGAGTATTAGGCACACAAATTGTAGTTTCCACAAACCAAATCGTTAGTAA
GATACAAAATATCTTTTCAGAATGTTAGCCAAGTTGTACTAATTGGAATT
TAAAAACATTATTCTGATCTTTGCAAAGAAAAAAACTGTCTGATTTGTAC
ATGCTTGTACCTCTGCTATATATTTTGACTGTTGTCGATGTTCAGGCGGT
CAACAGTCATTTAAAAAGACAGTAAGAGATATTACCAAATAAACGTTACC
GAAAAAAGCAGAGGAACATATATGTTAAAGTTTCTTTTTGGTCTTTGTGT
TTGACTTTGAGAAAGTCCAGTAAAGATTCAAACACCAAAACGAGCGGCCG
TCTATATAGTACGTATGTACTAAGGGGGGGGGGCTGGGTGTAGGGCTGTC
TTGTCAAAAGCATATGCTTGCGTACAGGGGAGGGGAGGGGGTCGAAACAA
AAATTTTACCATTTTTCGAAAAGAGGAACATACACGTTAAAGTTTCCTTT
TGGTCTTTGTGTTTGACTTTGAGAAAGTCCAGTAAAGATTCAAACAGCAA
AACAAACAAAAGCAATCAACATTCCAATGTGTAAAAACACTCAAGGTTGG
TGTGTTTATAAAAATTACATTTAAATGCTAAAAATTAATGTAAAAACTAA
TGTTTTCGTACTGAATTTTTTAATCAGTCTGGTCAAACAGAATCTTTTTA
CCAAGTGGAGACATGGTTATTCATTGAACCAGACTGTCGTCAGCACAACA
AAGGCTGTCTTCTTTAACTCTCCGACTGCTCCTTTAGAGCTTTAGCGTGT
CCAGCCGCCAATACGCCAACGGAATATAAAATTTCTAAAATCTATTATAT
CATTTAAATATTTTTCTGGTAAGAAAAACCTTGAAAATGGTGAAAAATTC
ATAGCTTCTTATTTTTTTTTGAAACAACTTTAGGCGAAGAAGGAGAACAA
GGGAAATGGAAGCCTGCTCCAGCAAGCAATAATACAGCTAAAAACCCACC
TCCTGCTCCTGTCAAACAAGGTAAACTTATTCTTAATCCCATAAGGGAAG
TGGAAAAAGATGAACTATTAAAAAACACCAATGTCTCCTCTGTTCGAATA
TATGGTAGGTGTTTAAAGTCTTGTAAATCTCGAACTTTACTCGCCTATTT
TTCGTGACTTTGGTTTATCTTACCGTCTGCGGGATAACATCTCCGTAACC
AATCGTCAGGTAAGCTTGGAGCGACCACCACATACTCTCATGTATATTCT
AAAACCCACTAGAGTTTGAGTGGAAAAGGAGCTACTAAGCTCAGTCACTT
TAAACATACAAATATCAAAGAGAAGTAAAAAGATTACTTCTTATTTACAA
AAATTGAATGTTTTGAACCAACCCTAAAAAAGAAAATGAATAAAACTTCC
CCATATGTATCATTTTTTGAGCCACAATTTCTCTAATTTCCTAAGAGTCT
TATTAATTGCCTCTGTCAGGGTCTCTATTGAATGGAAAATTAATCTTTAT
CGTTGTCATCTTGTTATGATAAATTTTTCAATAAATTAAATTTAGTAAAG
ATTCTGATCATAATCGCACGATGGGTTATTTTTTCTTATTTGGCACGCCC
TCAAAGAGAGCAATTAATCGTTAATTGCATCCTGTAGAGAGCAATTAATC
GTTAATCACACTCTCCAATGCCGCGCCAATGTTTACAAAATTGATTTGAA
TGATTTTTCTTACATTTTTTTTGCATCGAACGTTCTAATTGCATTCGAAA
TTTATTTTGTGAGAAAGAAAAACAATAAACAGCAATAAAAGAAAGACAAA
AAGAGAAGAGAAAAATATAAAGATTTTAAGTGTAATTTCTGTGATTTACT
TTCCTAACTGGGAAAAGTAGTGACAGCCATTGTACGATTAGCTCGTAATC
ACATAATAACTTGTACAATTCGAAAATTGCACTCGTGATTTTTTTGTTTC
GAATTTTCCTTTCGGACTCGGAAAATTAATAACAAAAAAATCACGAGTGC
AATTATTCTCTAATTGCACTCGTTATCATGTGATTACATATACAAATGTT
TTCCTGATTTTTATGGATTAAGCAATTACTTATTTTCCAATAGAACCTGT
CGGTACACACAACGTAGTGGGTGGTAAATACGTTCCGCCATCTATGAAAA
GAGCCACCATGGCTTCTGCATCGCATCAAGCAGCACCTAGAAGAAGAGGC
GCTCCACCAGATATTAAAAGTCAAGCTGCTTTCCCTACGCTTGCTGCTGC
TAAACAAGACACGTAAGACATTTAAGATGCCAAAATGAAAAATGAAATCG
GGGCTCCGTTGGGCTAATGCCTCTCCCCAATGTACATAGCTTAACAGTTC
TCTCAAAGTTAGCGGGTTGGTTGGAGATTGGACACTAGCTGTGTCTCAGT
TCGTGACAATTCCATTGATTCGTAGAATTCAGGTACCGGATGGTGAACAT
TGAGCACGTCGCTCCCCTCGTCTACTACGAACTAGTGTAATAGCAACGAA
CCGATAGCGCAGTTGGGAGAGCAATCGCCCGGCAAGCGAGAGGTCGTGGG
TTCAATCCCCACTCGATTCGTTACCTTTGAGAAAACTGGGAAGTACATTA
GTGCAGGATCCGTTGATTCATTACCCATAAGTAATACGCACTTGATTTCA
CACAGTGACTGTTGATGGACTAGTTGTCCGAAATCGGGGCTCCGTTGGGC
TAATGCCTCTCCCCAATGTACATAGCTTAACAGCTCTCTCAAAGTTAGCG
GGTTGGTTGAGATTGGACACTAGCTGTGTCTCAGTTCGTGGCAATTCCAT
TGATTCGTAGAATTCAGGTACCGGATGGTGAACATTGAGCACGTCGCTCC
CCTCGTCAACTACGAACTAGTGTAATAGCAACGAACCGATAGCGCAGTTG
GGAGAGCAATCGCCCGGCAAGCGAGAGGTCGTGGGTTCAATCCCCACTCG
ATTCGTTACCTTTGAGAAAACTGGGAAGTACATTAGTGCAGGATCCGTTG
ATTCATTACCCATAAGTAATACGCACTTGATTTCATGCCAAAATGGTTTT
TGAATTAGTAATTTTCTAAAATTATGGTAAAACTAGATTACCTTAAAATA
AGAACTAACTTTGGCGAGAGGCAAAAATCGTAAAGAAAATTAAATTAATA
ACGAGTTGAAAAATACATATTTAATAACGAGTTGACATAAATTTTTAATT
TTATTTTACACGCTAACATTAATAGACAAAATACTAATTTTGGTAAATTA
GTGACAAAAAATTAGCGTTTTTTGAGATACTTAAGGGTTCATTTCAAACA
TTTGAAAAAGTTATTTTGGCGAGCAATCAATTTTGATTTTGTCGAGGCGG
CAACTATTTTAATTTTGTCAAAATACGCCAAATTTGCCAAAAGTAGTATT
TTGTTTCAAACTAAAACAATTGTAAAACAAGCTTTTTTGAAATCTAGAAC
TAATCTTTTTTTATCATTGTTCTTCTTTTGCAGTGAAGCAGTCCCGAGTG
ATTTTGAAGTCGTCAAACGTGGAACGCGATCCAATGAGGCACGCAGGGAT
GACGGCGCTCCTCGACTGGAAACGGGGAATCGATACGATGGGCTACGTAG
TTAA Coding sequence (CDS) from alignment at sc0000104_pilon:370236..374539- >XLOC_044606 ID=XLOC_044606|Name=XLOC_044606|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1278bp|location=Sequence derived from alignment at sc0000104_pilon:370236..374539- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTCTGATGAAGAAGTTCTTGATGGATTCTTTGCCAAAAAAGACAAATC
CAAAAAACCAAAGAAAAAGAAGAAGACTAAAACAGAGACTGTAATCACTA
CTCAATCTGAATCACAGGCTGCTAAAATGTCTGATGAAGAAGTTCTTGAT
GGATTCTTTGCCAAAAAAGACAAATCCAAAAAACCAAAGAAAAAGAAGAA
GACTAAAACAGAGACTGTAATCACTACTCAATCTGAATCACAGGCTGCTA
AAGTTGATGAATGGAAAGATTTTGAGGAGAAAAAGGAAAAGGATTTTTCA
AATTTGAAGATTGCTGATTTACAGGGCGGGTTGATGAATGGAAAGATTTT
GAGGAGAAAAAGGAAAAGGATTTTTCAAATTTGAAGATTGCTGATTTACA
GGGCGGTGATGAAAATGATAAGGACGAACAAGAATATCAACAAAATGATG
AAGATGACGTCGACGTGATGAAAATGATAAGGACGAACAAGAATATCAAC
AAAATGATGAAGATGACGTCGACGGCGAAGAAGGAGAACAAGGGAAATGG
AAGCCTGCTCCAGCAAGCAATAATACAGCTAAAAACCCACCTCCTGCTCC
TGTCAAACAAGGCGAAGAAGGAGAACAAGGGAAATGGAAGCCTGCTCCAG
CAAGCAATAATACAGCTAAAAACCCACCTCCTGCTCCTGTCAAACAAGAA
CCTGTCGGTACACACAACGTAGTGGGTGGTAAATACGTTCCGCCATCTAT
GAAAAGAGCCACCATGGCTTCTGCATCGCATCAAGCAGCACCTAGAAGAA
GAGGCGCTCCACCAGATATTAAAAGTCAAGCTGCTTTCCCTACGCTTGCT
GCTGCTAAACAAGACACAACCTGTCGGTACACACAACGTAGTGGGTGGTA
AATACGTTCCGCCATCTATGAAAAGAGCCACCATGGCTTCTGCATCGCAT
CAAGCAGCACCTAGAAGAAGAGGCGCTCCACCAGATATTAAAAGTCAAGC
TGCTTTCCCTACGCTTGCTGCTGCTAAACAAGACACTGAAGCAGTCCCGA
GTGATTTTGAAGTCGTCAAACGTGGAACGCGATCCAATGAGGCACGCAGG
GATGACGGCGCTCCTCGACTGGAAACGGGGAATCGATACGATGGGCTACG
TAGTTAATGAAGCAGTCCCGAGTGATTTTGAAGTCGTCAAACGTGGAACG
CGATCCAATGAGGCACGCAGGGATGACGGCGCTCCTCGACTGGAAACGGG
GAATCGATACGATGGGCTACGTAGTTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000104_pilon | genome | sc0000104_pilon:370236..374539 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 520-639:121 |
| Aaloc | 352-516:1510 |
| Aaloc | 265-348:2670 |
| Aaloc | 205-261:3732 |
| Aaloc | 127-201:3921 |
| Aaloc | 1-126:4305 |
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