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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000026_pilon:238815..242659- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_044564 ID=XLOC_044564|Name=XLOC_044564|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3845bp|location=Sequence derived from alignment at sc0000026_pilon:238815..242659- (Clytia hemisphaerica_ch_hm2_pilon) ATGGAGGGCAATCAACAGACTTTCAAATGCCTTTTGTGCAATCATTTTCA
CGCACTTTCACTTCGCTCTCTCCTGAATCATTATCGTATTGTTCATGTCA
ACCAGTCCACATTCAATGTGACATGTAATGTAGATGGATGTCCGGCCACA
TTTTCACTTTATAACTCATTTTACAAGCATGTAACAAGAAAACATTATGC
TGTCTATTCTCGACAACTTCTGGGGGGTAATCCACAAGCACAACATCCTG
ATGCAGTTGATATAACCGAGGATAATAACCAGGGAAATTTTGATGATATT
GATGCAGAAGTGGTGGAGGATACAGCAGATCAAGAAGACCAAAACAGCAG
TGATGATCATCTTAATGATGATGACGATGATGATGATGATGAAGAAGATG
ACGAGCCATGTCAATCACAATCATCATCATCAGAAGATGAGCAAGATCCA
GAAAATAATGCAGCAAATAACTTTGAAGTAAGCCATGGTGTGCCAGATTA
AACAGTATGATAAAAAAGTACTTTTTTCCAGAAAAGAGAGCATAGATCAT
ATATCATGATTTTGAGAAACTCGACGTATACGGAGAGCGTGCTATTGAAT
TGACACTCAACGTATATGTCGATAGCACGCTCGCTGTATAGATATTTTGC
CAAAGAGAACGTTCTGTTGAATAATTATGTAGGCCAGAGTTTTTTTCTGT
AGGGCTGTTTATCTATATAAGTGTCCACGCGACAAGCTAGAAAGAAGAGA
TACATCATCAGGTCTCAGATTCGCAACCTAATGAGGGTATATATACTTTG
TCCGCGCGGACACTTGTATTTGTAAACAGTCATAAAGAAAAAACTCAGCG
TGCGTCGCTGCGGCCAATCATCCGATTTAAGGTATTTTTCATTACGTAAT
TTCTGCTGGACTACATAATTATTCAACAGAACGTTTTCTTTGGCAAAATA
TCTATACATCGAGTATCCCTAACTGTACTAAAGCTAGTACGTACAAAATT
TTTGATATCCCTTCCCCGTGTACACATGACAATAGAATGATCTAATTTAA
ACAATAGATATGCGCTTTAAAGTTCCTTTCCCCCTTCATGTGTATGTACT
ATATGGATGCTATTTAATTACATCCGGGGAACTCACCACTACTTTTTGAA
TGAATTTTTTCTAGTGTTTGGAATCAATTATTCCATCTGTCCATTGCCAT
AGATGTACTAGCTCTTATAATTGTTTGGAGAAGTACAATGATAGGTATAT
ACATCATTCAATTTTATATATTTTTTAATTTATAGGATGATCCTGAAATT
TGCCTCAAGAAATCTGCTGCAATGTTCTTATTGAAATCAAAAGAGCGAAA
TAAATTATCACAGGTAGGTACTTTCATGGGATAAATTTTAGTGGGAATTA
ATCGCGGATGAGTTTCAGAAAAAGGAAATATTTGATTTTCATTTTTTTAA
ATTTGTTTCCCAAGGGTCATTCATTTGTGTATGCAGACAAAGTTTAAAAG
CCAATGCATAAAATGCCTATTGTTTATGTCATTATTTTCTGTGTGCAAGG
GGAGGGTTCAATTTTTGCATAACTCTTTTTAATGGTGCGTTGTATGTATC
CTCATTTCATTGAAAATAAGTTAAGAATTTTTTAAAGTGAAAATCTATTA
ATCAATTTTTTTCTTCTTTACAGGCTACAATGGATAAAATCAGAGACAAT
GTTTCATGTCTTGTGGTACAACATAACGCAATTTTAAAATCAAAGGTTAT
TGAAGAACTTAATATTACTGAAAATGATCATATTTCACTGTTGGATGAAA
TATTTGGTGATGGAAATAACATTTTTGAAGGTCTTTCAACTGAGGCCCAA
CAGAAATCGTTCATTAAATCGAATTTTTCTCACGTGAAACCGATTGAGAT
TATTTTGGGATCGATTTTAGTAAGGAAGCGCAAAAAGAATCAGAGGTTTG
TTACACAAAAAAACGAGACAATGATGTATATTCCTATTCTTGAAACATTA
GAGCAAATGCTTTCTAACAAGAAAATTTTTTCAGTAATATCAAAGCCGAC
ACATCAAACTGGAAATGGCTACTTTTATGATATTTTTGATGGATCAGTGT
ATACAAGTGATCAGTATTTTAAAGACCATCCTTCTGCACTTGCCATTATA
CTATTTCATGATGAGGTTGAAATATGTAACCCGCTTGGAAGTGCCGCTAC
CAAATACAAAATAGACATGTACTACTATTGTGTTGCTAATATCTCACCAA
AATACCGATCAAGAGTCTGTGCTGTCCAACTTTTAGCAATTGTTAAAGCA
TCACATGTAAAGAAGTATGGTATTAGTAAAATACTTGATCCAATAATCAA
TGACTTAATTCTGCTTCATCATGGACATACTATGAATTTTAATAATGAGG
AAAAAGTTGTTTTTGGAAAAGTTGTCATGTGCTTAGGAGACACGCTAGGC
CAACACTTGTGGGGAGGCTTTAAGGAAGGTGTTGGTGGTGCATATCAAAA
ATGCCGGCATTGTTTCTGTGACTTTCAGACCCTTCAAACAGTTTTCGATT
TATCCAAAATCACACAGAGAACTGAAAAACTTTATGATGAGCATTGCTCT
GAAATTGAGAACGCAACTGGTGAATTTCAAAACGATTTAAAGATAACATA
TGGCATAAACCGAAGAAGTCCACTGTGTAAGCTACCCAATTTTAACATAA
CTACTCAACTTCCTCAAGACATTATGCATATTCTTTTTGAAGGGACTGTC
CAATATGAATTGAGACTTGTTTTGAAGGAGCTGATATATACTCAAAAGGC
TGTATCTTTAGACTCTGTTAATGGATCCATTTCTAGCCATCTTTATGGTT
ATTCTGAAATATCGTCCAAGCCTCCGCCCATTAGAGACTCTGTATTTGAA
AATAATGCCTACAAACTTAAATTTGAAGCTGACCAAGCACGTTTGTTTTT
AAGACTTTTCCCACTATTGATTTGTCCTTACGTTGGCTTTGACAATGAAT
ATGTCAAACTTATTGTCGACTTAATCGAGATTTGTAAAATATTGGTATCT
CCCGTTATTGGACAACAAACGATTACATTGCTCAAAGAGAGATTACCAAA
GCACCTACAAGAATTCAAACGTCTATTCCCAGACAAAAATATCCTTCCAA
AGCACAATTACATGCTTCATTTTATACATTCGATAGAACAGTTGGGCCCA
CCAATTAGATATTCGTGTTACAGTTTTGAGGCCGCCCATAAATACTTTAA
AGGATTGGCCAAGTCGCAGAATTTCAAAAATCTTCCATTTTCTCTTGCTA
ACCGTCACCAGTATCTTGATACTGCAAACTATGGGGATAACTCAGAAAGG
TGCTCTTCACACCCATTATTTGATAAGGAGCAGCTAAATGGAGTAGTGAA
GCCACTGGATGAAAATGAAAAAGTGACATTAAGGAACAGATTTAACGAAC
TCAACTATTTACCAGGTATAGATTTTGAGAAAGCAGGCTTTAAAGCAAGT
TGGGTGATACGCTTTGGAACCAAGTATTGTCGAGATGCTTTCGTAGCTGT
AAATGTTAATCAACAACTGTTGCCGTTATTTGGAAAAATAAAGCAAATTT
ATTTGATTCGTGGCTATCTTTACTTTGAAGTGCAAGACTTTGAAACTGTT
TGCTTTGATGACGATTTTCAGGCACACCAAGTAGAAGAGAAAGATGATAG
CTCGATTGTCCCATATGAATCATTAATAGACTACAATGTTTTTCACTTAA
AGATTTATTCAGAGTATCACTACATCCAAACCAAATATTTTCTGGGTGAT
ATCATTAGATGCCGTTTAGAAGGTCGATATCCTTTACGGAAATAG Coding sequence (CDS) from alignment at sc0000026_pilon:238815..242659- >XLOC_044564 ID=XLOC_044564|Name=XLOC_044564|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=5454bp|location=Sequence derived from alignment at sc0000026_pilon:238815..242659- (Clytia hemisphaerica_ch_hm2_pilon) ATGGAGGGCAATCAACAGACTTTCAAATGCCTTTTGTGCAATCATTTTCA CGCACTTTCACTTCGCTCTCTCCTGAATCATTATCGTATTGTTCATGTCA ACCAGTCCACATTCAATGTGACATGTAATGTAGATGGATGTCCGGCCACA TTTTCACTTTATAACTCATTTTACAAGCATGTAACAAGAAAACATTATGC TGTCTATTCTCGACAACTTCTGGGGGGTAATCCACAAGCACAACATCCTG ATGCAGTTGATATAACCGAGGATAATAACCAGGGAAATTTTGATGATATT GATGCAGAAGTGGTGGAGGATACAGCAGATCAAGAAGACCAAAACAGCAG TGATGATCATCTTAATGATGATGACGATGATGATGATGATGAAGAAGATG ACGAGCCATGTCAATCACAATCATCATCATCAGAAGATGAGCAAGATCCA GAAAATAATGCAGCAAATAACTTTGAAATGGAGGGCAATCAACAGACTTT CAAATGCCTTTTGTGCAATCATTTTCACGCACTTTCACTTCGCTCTCTCC TGAATCATTATCGTATTGTTCATGTCAACCAGTCCACATTCAATGTGACA TGTAATGTAGATGGATGTCCGGCCACATTTTCACTTTATAACTCATTTTA CAAGCATGTAACAAGAAAACATTATGCTGTCTATTCTCGACAACTTCTGG GGGGTAATCCACAAGCACAACATCCTGATGCAGTTGATATAACCGAGGAT AATAACCAGGGAAATTTTGATGATATTGATGCAGAAGTGGTGGAGGATAC AGCAGATCAAGAAGACCAAAACAGCAGTGATGATCATCTTAATGATGATG ACGATGATGATGATGATGAAGAAGATGACGAGCCATGTCAATCACAATCA TCATCATCAGAAGATGAGCAAGATCCAGAAAATAATGCAGCAAATAACTT TGAAGATGATCCTGAAATTTGCCTCAAGAAATCTGCTGCAATGTTCTTAT TGAAATCAAAAGAGCGAAATAAATTATCACAGGATGATCCTGAAATTTGC CTCAAGAAATCTGCTGCAATGTTCTTATTGAAATCAAAAGAGCGAAATAA ATTATCACAGGCTACAATGGATAAAATCAGAGACAATGTTTCATGTCTTG TGGTACAACATAACGCAATTTTAAAATCAAAGGTTATTGAAGAACTTAAT ATTACTGAAAATGATCATATTTCACTGTTGGATGAAATATTTGGTGATGG AAATAACATTTTTGAAGGTCTTTCAACTGAGGCCCAACAGAAATCGTTCA TTAAATCGAATTTTTCTCACGTGAAACCGATTGAGATTATTTTGGGATCG ATTTTAGTAAGGAAGCGCAAAAAGAATCAGAGGTTTGTTACACAAAAAAA CGAGACAATGATGTATATTCCTATTCTTGAAACATTAGAGCAAATGCTTT CTAACAAGAAAATTTTTTCAGTAATATCAAAGCCGACACATCAAACTGGA AATGGCTACTTTTATGATATTTTTGATGGATCAGTGTATACAAGTGATCA GTATTTTAAAGACCATCCTTCTGCACTTGCCATTATACTATTTCATGATG AGGTTGAAATATGTAACCCGCTTGGAAGTGCCGCTACCAAATACAAAATA GACATGTACTACTATTGTGTTGCTAATATCTCACCAAAATACCGATCAAG AGTCTGTGCTGTCCAACTTTTAGCAATTGTTAAAGCATCACATGTAAAGA AGTATGGTATTAGTAAAATACTTGATCCAATAATCAATGACTTAATTCTG CTTCATCATGGACATACTATGAATTTTAATAATGAGGAAAAAGTTGTTTT TGGAAAAGTTGTCATGTGCTTAGGAGACACGCTAGGCCAACACTTGTGGG GAGGCTTTAAGGAAGGTGTTGGTGGTGCATATCAAAAATGCCGGCATTGT TTCTGTGACTTTCAGACCCTTCAAACAGTTTTCGATTTATCCAAAATCAC ACAGAGAACTGAAAAACTTTATGATGAGCATTGCTCTGAAATTGAGAACG CAACTGGTGAATTTCAAAACGATTTAAAGATAACATATGGCATAAACCGA AGAAGTCCACTGTGTAAGCTACCCAATTTTAACATAACTACTCAACTTCC TCAAGACATTATGCATATTCTTTTTGAAGGGACTGTCCAATATGAATTGA GACTTGTTTTGAAGGAGCTGATATATACTCAAAAGGCTGTATCTTTAGAC TCTGTTAATGGATCCATTTCTAGCCATCTTTATGGTTATTCTGAAATATC GTCCAAGCCTCCGCCCATTAGAGACTCTGTATTTGAAAATAATGCCTACA AACTTAAATTTGAAGCTGACCAAGCACGTTTGTTTTTAAGACTTTTCCCA CTATTGATTTGTCCTTACGTTGGCTTTGACAATGAATATGTCAAACTTAT TGTCGACTTAATCGAGATTTGTAAAATATTGGTATCTCCCGTTATTGGAC AACAAACGATTACATTGCTCAAAGAGAGATTACCAAAGCACCTACAAGAA TTCAAACGTCTATTCCCAGACAAAAATATCCTTCCAAAGCACAATTACAT GCTTCATTTTATACATTCGATAGAACAGTTGGGCCCACCAATTAGATATT CGTGTTACAGTTTTGAGGCCGCCCATAAATACTTTAAAGGATTGGCCAAG TCGCAGAATTTCAAAAATCTTCCATTTTCTCTTGCTAACCGTCACCAGTA TCTTGATACTGCAAACTATGGGGATAACTCAGAAAGGTGCTCTTCACACC CATTATTTGATAAGGAGCAGCTAAATGGAGTAGTGAAGCCACTGGATGAA AATGAAAAAGTGACATTAAGGAACAGATTTAACGAACTCAACTATTTACC AGGTATAGATTTTGAGAAAGCAGGCTTTAAAGCAAGTTGGGTGATACGCT TTGGAACCAAGTATTGTCGAGATGCTTTCGTAGCTGTAAATGTTAATCAA CAACTGTTGCCGTTATTTGGAAAAATAAAGCAAATTTATTTGATTCGTGG CTATCTTTACTTTGAAGTGCAAGACTTTGAAACTGTTTGCTTTGATGACG ATTTTCAGGCACACCAAGTAGAAGAGAAAGATGATAGCTCGATTGTCCCA TATGAATCATTAATAGACTACAATGTTTTTCACTTAAAGATTTATTCAGA GTATCACTACATCCAAACCAAATATTTTCTGGGTGATATCATTAGATGCC GTTTAGAAGGTCGATATCCTTTACGGAAATAGGCTACAATGGATAAAATC AGAGACAATGTTTCATGTCTTGTGGTACAACATAACGCAATTTTAAAATC AAAGGTTATTGAAGAACTTAATATTACTGAAAATGATCATATTTCACTGT TGGATGAAATATTTGGTGATGGAAATAACATTTTTGAAGGTCTTTCAACT GAGGCCCAACAGAAATCGTTCATTAAATCGAATTTTTCTCACGTGAAACC GATTGAGATTATTTTGGGATCGATTTTAGTAAGGAAGCGCAAAAAGAATC AGAGGTTTGTTACACAAAAAAACGAGACAATGATGTATATTCCTATTCTT GAAACATTAGAGCAAATGCTTTCTAACAAGAAAATTTTTTCAGTAATATC AAAGCCGACACATCAAACTGGAAATGGCTACTTTTATGATATTTTTGATG GATCAGTGTATACAAGTGATCAGTATTTTAAAGACCATCCTTCTGCACTT GCCATTATACTATTTCATGATGAGGTTGAAATATGTAACCCGCTTGGAAG TGCCGCTACCAAATACAAAATAGACATGTACTACTATTGTGTTGCTAATA TCTCACCAAAATACCGATCAAGAGTCTGTGCTGTCCAACTTTTAGCAATT GTTAAAGCATCACATGTAAAGAAGTATGGTATTAGTAAAATACTTGATCC AATAATCAATGACTTAATTCTGCTTCATCATGGACATACTATGAATTTTA ATAATGAGGAAAAAGTTGTTTTTGGAAAAGTTGTCATGTGCTTAGGAGAC ACGCTAGGCCAACACTTGTGGGGAGGCTTTAAGGAAGGTGTTGGTGGTGC ATATCAAAAATGCCGGCATTGTTTCTGTGACTTTCAGACCCTTCAAACAG TTTTCGATTTATCCAAAATCACACAGAGAACTGAAAAACTTTATGATGAG CATTGCTCTGAAATTGAGAACGCAACTGGTGAATTTCAAAACGATTTAAA GATAACATATGGCATAAACCGAAGAAGTCCACTGTGTAAGCTACCCAATT TTAACATAACTACTCAACTTCCTCAAGACATTATGCATATTCTTTTTGAA GGGACTGTCCAATATGAATTGAGACTTGTTTTGAAGGAGCTGATATATAC TCAAAAGGCTGTATCTTTAGACTCTGTTAATGGATCCATTTCTAGCCATC TTTATGGTTATTCTGAAATATCGTCCAAGCCTCCGCCCATTAGAGACTCT GTATTTGAAAATAATGCCTACAAACTTAAATTTGAAGCTGACCAAGCACG TTTGTTTTTAAGACTTTTCCCACTATTGATTTGTCCTTACGTTGGCTTTG ACAATGAATATGTCAAACTTATTGTCGACTTAATCGAGATTTGTAAAATA TTGGTATCTCCCGTTATTGGACAACAAACGATTACATTGCTCAAAGAGAG ATTACCAAAGCACCTACAAGAATTCAAACGTCTATTCCCAGACAAAAATA TCCTTCCAAAGCACAATTACATGCTTCATTTTATACATTCGATAGAACAG TTGGGCCCACCAATTAGATATTCGTGTTACAGTTTTGAGGCCGCCCATAA ATACTTTAAAGGATTGGCCAAGTCGCAGAATTTCAAAAATCTTCCATTTT CTCTTGCTAACCGTCACCAGTATCTTGATACTGCAAACTATGGGGATAAC TCAGAAAGGTGCTCTTCACACCCATTATTTGATAAGGAGCAGCTAAATGG AGTAGTGAAGCCACTGGATGAAAATGAAAAAGTGACATTAAGGAACAGAT TTAACGAACTCAACTATTTACCAGGTATAGATTTTGAGAAAGCAGGCTTT AAAGCAAGTTGGGTGATACGCTTTGGAACCAAGTATTGTCGAGATGCTTT CGTAGCTGTAAATGTTAATCAACAACTGTTGCCGTTATTTGGAAAAATAA AGCAAATTTATTTGATTCGTGGCTATCTTTACTTTGAAGTGCAAGACTTT GAAACTGTTTGCTTTGATGACGATTTTCAGGCACACCAAGTAGAAGAGAA AGATGATAGCTCGATTGTCCCATATGAATCATTAATAGACTACAATGTTT TTCACTTAAAGATTTATTCAGAGTATCACTACATCCAAACCAAATATTTT CTGGGTGATATCATTAGATGCCGTTTAGAAGGTCGATATCCTTTACGGAA ATAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
| sc0000026_pilon | genome | sc0000026_pilon:238815..242659 - |
Properties
| Property Name | Value |
| Aaloc | 556-2727:2173 |
| Aaloc | 478-555:2561 |
| Aaloc | 1-477:3846 |
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