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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000160_pilon:300640..304190+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_044553 ID=XLOC_044553|Name=XLOC_044553|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3551bp|location=Sequence derived from alignment at sc0000160_pilon:300640..304190+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGAAATTGATACGGAGAAAAACGCAAAAATGGATGTGAAGAAAACCGC
ATTGGACCGACTCTCGATTACCACCCCTGAAGTCTTTGAGTATGTGCCTA
GAGCTAGCTCTAGGAACAACAGCCGTTCATCAAAGAAATCTTCCACATTT
AATTTCGAGAAGGCATACCATGATATGCTGGAGGTAGATtagtttttcat
tctttttaaatttttttattttcaattgtgCCATTATATTTTCTTTGTAC
TTCTTTGATATAatccttaatttttttttgtaactctattagtatatctc
catagttattgttgttattgttgttgtctccatattgtattgtagttatt
gttaGACAGTTAGTAAAtagcccgggggtactagggttgatGGATGCTGG
GTATGCTCGTGCCGGACCTCCAAACCCTgactcttagagagactttggaa
ggtgaaaaacggacccttaaggcacgcacatacccagcaccggGCCCAGC
ACCAATTTTTGCCTTTTAAGTACCCACCCCCGGGTCAAATAGTATGTGTA
TGTAATAGAAACAACAACGATCAACTCTAGCAAAGTTAATTTTTCTCTAC
TTTATTCAAATATTAATGATTCGAAATAATTGTTTGAAAGAATATTTAGG
ATTTATGTTTTTTCAGTCTTCTTAAAAATCGAATAAGTGAAACTTCGTAT
ATTTTAGTTTGAAGTACGAGCTAGAATCAATGAGCCCCCCTAGCTGTTTA
CGtgattactttaatgggataaattttcgcggggattaattttcgcggat
ttcgcggatttgggtgtcatccgcgaaaataagtcccattggaaatttga
aaaaggcccatccgcgaaaattagtttccgcgaaaaattttaattttttt
ggcaatccgcgaaatttctatttttatcgttttttattttcttttctaca
tGAGGACACGCAACCCttgaaaaaggtcaaatcctcgatatgcttgttag
caaaaaatcgttttcctcaaaattttcttcacaaatttacaaactcggaa
gaggtattggaaaaacttttatccaaagtgatcgcttattgttaaaagct
tttcaatgcaagagggtaatccaactggcttgaaattaaattgacacgag
aaactaaaactaattcattttcaatttaattttcttatcccgaatttctc
ttccgcttttttcccaaataggctgtgaaaatttagctccgcaccatgga
attaaattaaacttttgatagttttaaTATATATCTCATCGCCCTATTCC
AAAATTCCctattcttttcaaaaattttaatttgtaccccaatccgcaaa
attaaatccccgcgaaaaatcaggaaatccctcatccgcgaaaattaatc
cccgcgaaatcttaaaatttcgcggatgagctcaaccgcgaaatttaatc
cccgcgaaaatttatcccattaaagtacgtgatttggaaattttttcttc
gtgattgcgtgatcagaggtcaaaacgtgatcgtgatttgaaagattttt
gagccgtgatgcgtgatttggattttttcaaagagatgTGTGATTGTCCA
TTTGTTTTGCATTTTTACGTGATCATGATTAAAGACAAAAAATTCCGTgg
tatcgtgatcagagttaccgctggggaGCCTCGCCAATAGTTCCGCATTA
GTTAagtcatggaggtataaagaaagacaggagaagtatgctattgtaac
caagctcgccctacgattaaaaaagttacgatgtatgcatgctcataatc
tcattatatcgtgcatttttaatgagctcttttatccataggttaaatct
tattggctaatttaagctttagaaattagatgagacgagattcattgttt
ctgacatcagtgtaagaaaatatttggactaaaaaaaggcctgtaaactt
ggcaatccttcatcaaatgataagatttttcgatcaatgttttctttcag
gtgaactctattgcttgatactttcctccaaaattctccagcgactttat
gtctacaaattgagtctgaaatcgtgtgtgcttataaagaacttttcatt
ttctggcttgagaaaatatcttttcaaaacaaaattgaacggatagcgaa
atggaacataaatttgtttcgtggacgaagttttatctaattttcgtata
ttaaaaggctagaatcttcaatactgattattagaatgttcagagcaaac
ttgagttctactaaaaagtcttatttcatcgggcgagcttagaatttctt
ttgatatattttataaaagaaatcaaaagactttaacgaccaattaccga
cacattcaactcctgttttctttatacctctatggttaaGTTTAGCACAG
CCGGGCTTGTGTTTCAAGTGACAATTAACACTTTATTTACCGGGTTTACC
ATCAGTAATAAAGTCTACCAAGATATTGTAATAATTACAAATTAATCAAA
TTATTTGACTAATATTTTACTAATAATTGCTTAGAAATAAGTGCTATTGG
AAATGGCCACTACAGCTTCAACTTTTGTAGCATACACTGGATAAAAGAGA
GCATACTTTAGATGAGAGAGCTGCCAAGAATTTAGACCTGAAAAAAGTTG
ACATTAAAAAGCCTAATCAAAATCAACATTGCCTTGAAAATTTGTTCCAG
cctataaaattataaaatcacTGAATAACCTTTATAATTGTTTTAGTGTA
TGGTGAACATACTTTAGGCGTAATTTTTCACGAGCAGAAACCTTcacgat
tttcgtgaattttggcctttttcgcgaaagtaaatgtctaagtaagtaaa
gtaagtaatccaaagtaaaatttttatcagggcgatttgcgaaagtttat
gctcgtgaaaaacattttttcctcaaattcgtaaaaaaaagtaaatgtcg
taaatttcgcaatttttcgacctcgcgaaagtttctgctcgcgaaagtgt
gtacgcctaaagtaagttTAATTAGGTCGAAGTTTTACATCTAGCCATCG
GCCTAGAACTCAATGAATCTATATGTAAACAAGGGAAAGGATTTTGTCGA
GTTAAAAAGTATTTGAAAGGCGGTGTTCCAATATGATATCTTGGATAACT
TTTCAGCCAATCTAGCCCTAGACTTATGTCTTTTCTTAtcaatatatctt
tttttatagaaattgaAGTTCAAGGAGAACGAAGTTGCAACGTTAAAACA
ACATATGCAATTAATCTGTTCGGAACGGGACGATTTGAAAAAGGATGCAG
AGTTACTGGTCGCTGTTAACAACCAATCTTTGCACCGTTTGGGTGCAATA
ACTGAAGAACGACCTGAAGCATCCAAAATAGATGAGCTTCTAAAACGCAT
CCTTAAGAGCGATCAATTGATCGACGCACTCGCTGTAGAGCGAACGGAAA
ACGCGGAATTGATTCGCCACGTGCATGCTGAAAACGGTATCTGCCGCAAC
ACCATCCAGCTACTTAAGGAGGATATTAAAGAGAAGGAAAAAGCTTTAGA
A Coding sequence (CDS) from alignment at sc0000160_pilon:300640..304190+ >XLOC_044553 ID=XLOC_044553|Name=XLOC_044553|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1050bp|location=Sequence derived from alignment at sc0000160_pilon:300640..304190+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGAAATTGATACGGAGAAAAACGCAAAAATGGATGTGAAGAAAACCGC
ATTGGACCGACTCTCGATTACCACCCCTGAAGTCTTTGAGTATGTGCCTA
GAGCTAGCTCTAGGAACAACAGCCGTTCATCAAAGAAATCTTCCACATTT
AATTTCGAGAAGGCATACCATGATATGCTGGAGATGGAAATTGATACGGA
GAAAAACGCAAAAATGGATGTGAAGAAAACCGCATTGGACCGACTCTCGA
TTACCACCCCTGAAGTCTTTGAGTATGTGCCTAGAGCTAGCTCTAGGAAC
AACAGCCGTTCATCAAAGAAATCTTCCACATTTAATTTCGAGAAGGCATA
CCATGATATGCTGGAGaaattgaAGTTCAAGGAGAACGAAGTTGCAACGT
TAAAACAACATATGCAATTAATCTGTTCGGAACGGGACGATTTGAAAAAG
GATGCAGAGTTACTGGTCGCTGTTAACAACCAATCTTTGCACCGTTTGGG
TGCAATAACTGAAGAACGACCTGAAGCATCCAAAATAGATGAGCTTCTAA
AACGCATCCTTAAGAGCGATCAATTGATCGACGCACTCGCTGTAGAGCGA
ACGGAAAACGCGGAATTGATTCGCCACGTGCATGCTGAAAACGGTATCTG
CCGCAACACCATCCAGCTACTTAAGGAGGATATTAAAGAGAAGGAAAAAG
CTTTAGAAaaattgaAGTTCAAGGAGAACGAAGTTGCAACGTTAAAACAA
CATATGCAATTAATCTGTTCGGAACGGGACGATTTGAAAAAGGATGCAGA
GTTACTGGTCGCTGTTAACAACCAATCTTTGCACCGTTTGGGTGCAATAA
CTGAAGAACGACCTGAAGCATCCAAAATAGATGAGCTTCTAAAACGCATC
CTTAAGAGCGATCAATTGATCGACGCACTCGCTGTAGAGCGAACGGAAAA
CGCGGAATTGATTCGCCACGTGCATGCTGAAAACGGTATCTGCCGCAACA
CCATCCAGCTACTTAAGGAGGATATTAAAGAGAAGGAAAAAGCTTTAGAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000160_pilon | genome | sc0000160_pilon:300640..304190 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 184-525:3210 |
| Aaloc | 1-183:1 |
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