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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000026_pilon:310508..314517+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_044536 ID=XLOC_044536|Name=XLOC_044536|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4010bp|location=Sequence derived from alignment at sc0000026_pilon:310508..314517+ (Clytia hemisphaerica_ch_hm2_pilon)
AGAAACATGAAGATTTTATGGTTGTCAATCATTTGTATCTCGTATTTATC
GATGGTCGTCCAAGCCAAATCAAGTGAGTCTTTGTTTTGTGTTTGGAAAA
TTACGTGATTCGAAGAAGGAATGTTTTAAATGTAAATGTAGAAATTAATC
TTTCGTATCATGTATGGGATCGatggatttctttttcttccagTCAACAT
ACCTTTTTACGGTTAGCtgcttcgtataaaaagtcactaaaatttcaagt
aaacaaaccatctcattgactaaaagcaaaaacataaagaaGATGTCCAG
AGTAAAGAGCACAGAAAGCACATTTTCTCATACTTTGCACATTTTTcata
tgtttttgcttttagccaatggaatggtttgtttactcgaaattttggtt
aCTTCTTAGACGAAACAGCTAACCGGAAAAATATGTATTCAATTAACATT
CCAGACCCGTtgcttttatgattttttacgaTAAATCAATTCGCTAATTG
ATGGTACTTACAACAGATACCTTTCCAACAATATAATATACAAATGCGAA
TGCAAATAATTCTGTCTGTTATAGCCACTTTGGAAGTAAAGACTTGACCA
CTCTGGCACATAATTTTCACTTTCGTACAGATCTTTGAGGCGGCCATTTT
GGTCTGTCTcaatattttgagatattttgagcAGAAATGCTTTTGCTGAT
CCAAATTTTGAGCAAACTTATGGAAAGTTAGCCGTAATTACATTTTCTTT
TGAGGTTTTGAGCCAAATAGGAGTAAGAATTTTTAACTAACTCCTAACTA
GTGCAATTATTTTCTTTCATCAATAGACTTCTCAATAGAATGTGATACCC
AAAAGATGACTATTTACATTCTTAAAGATACAATTTCAATCCCTGAAAGT
GATCTTTCTCAATACAATATTTCATGGTATGATTCTACTTGTGGACCAAG
TGGAAAGTCCAATGAAACGCATTTGATTTTGGAGGCTGGTTATTCGTCTT
GTGGGACTCGAGCTATCGACAATGGCAATGACGTGACTTTTAAAAATCAG
GTACCTCGCTTGTCTTCCAAAAAGATTTTAGTGTCTCTTTTAGGTTAAAA
TGTTTACAATacacacaggttgcaaaatgaaagtctgaagacaaatcacg
cttttactcgaaatttttatgtgtttgttacatgacattatttctgattg
gttcgaatttattgatacACTagtaaagttatcagctgtaagttgtaaag
caattAAGATGGGAATAAAACCACGTGAAcattttcgagtaatcacatgt
tttgagtgcattgatataattttgcagccCGTGTATTTGTAATAATTCTT
TTTGAAGCGCACTTACATTTAACGTAGAACCACTTTCTTAGCCGATTTCA
CTGGACAGGAGTCACCTGCgaataattttttgcaaaaaaaaacattttac
tgtATCATTTAAAGGATATAAATAAGTTCGATGCATAACAAGGAACACTC
CTTCCCAAGTGGGAGTATGTTAGATCAGTGCACAGGATATACAGTGTCCt
gaaaaaagcggacaaatatCTATACAAAGTATAATCCTCATAATTTATgt
gaaattttatgaattacatatttaatatttaatcccaaaaacctattcaa
tcgTTTTGGAAaagaatatctattgattgagcCGAGAATTTTGATCTTAT
TTTAATCATTCCATGTCCAGTAAGGATAAGTTCAGAATTTTACTTAATGT
TAAAAGATGCCAATTCTTTTGGGATGCACTGTGGTAAGTGAACGTTCCTT
TGATTTACTTTGAAACCCTTTTTTCAATATTCAGGTTTCGGTCAATTTGA
ACGCTACAAACGCATATAAAAACAACTTATTGGAAAGGATTGATACCTTT
GCCACATATTCTGTTGAATGCAATGTCCCACAAGGTGTGAATGTAACACA
TGAATATGGAGCCAATATCACCAAAGCTGATTTGGTCGAAGGAGTATCAA
GTGAGTAAAACCTATATCATGACGTAATGTGTTATACGGAAGCAACTTAG
ATCTAGGCCCACCGTTTGTCACTAGTTTCAAAATTATTGGTAAATAactg
ttttttttatgtttccTTAACACATTACGTCATGAAGGATTTGGGTAAAC
CAATGCAGCTTATTGGAAATCAACcttagatatttttattgaagtataac
ttttatttatcaattttacTAGGTTCGACCGACCAATTCACTGTCTCAAT
GAATCTACATAAAGACTCAAACTTCAATAAAAGTCTTCAATATCCTGCAG
TTATTGATAGATTGGGACGTTTCAATTTGGAACTTGAAATTGACACTGTT
GCTGAACTGTCAATTATTCCACGAAACTGTCATGGTACTTTAACTTCAAG
CCGAGACGATGGTATTCGGGAAGATCTTATCACTGACGGGTAATTCAACt
tttttacgtttagagcatttttatttttctttccctAAAGTTAGATTCTG
TTTTCGTACATTTGTTTTCTTCCTGAGAGAAGGTGGGCTACTTGATACAG
AATTTACCTATCAAgtttttgattgtatttttcttaaaagttgTTATAGG
AAATTCCCGGGAATGTTTGCCAGCTTCGAcgtaaaaatgaagaagttgTG
ATCATTTTAGATGGGAAAGTTTTTGCAATTAGAACCCTTATAAAGTCCCG
TGTATTTTGTACCGCTCAGAGTTCTTTGAAGTAAACGTCTACTGAGTAGC
CCCTAGATGAATATTTTGTTGCTTTGACAGATGCCCCAATGCTGaccatg
ttttcaaaaaagaaactgCAGCTGACAGTGGAAAGAAATTCCGATTTTCA
TTGAACGTATTCCGATTCAAAAACTCAAACGGCATGGTCTACATTCATTG
CTCCGCTCACGTCTGTTTGAAAAACAGCAACGAAACAAACTGTCAATTTG
GTTGTGAGCAAAATAGCAGACGGCGAAGACGTTCAGTGGAGGATAATGCT
TTGACAACACTTGATCATAATCTTTCCAAAGATTATGACATCCGAACTGG
ATTAATTATTGTCACTGAAAACTCTAAAGGTTAGTTAGGATATATTTTAC
GTGTTAATGCTTCATCGTTACCTCATTTCAACCTTaggagactgttcatc
taacgctttcagaccatctaaaaagaataACAAATAACTATtgaaaagcg
acaaaaagaacgacaaaccctaactatcaaagaacgacatattttgcCGT
CCCAAACCCCAACTTTAGTCGGTGACTACCACCCCTaaatattcattact
ttttgcacTTTAGGCCCTCTATCGGAAAATGTTTGAGtttaatttttaat
gtttttaaaagctCTGAAATACGGTGGTCATTCAGAATTACTGTGCCTAG
GGTATTTTTCGCATCGGGGACTATTTTCATGCAAGTTTTCCAACGAGGAG
GGTTCGTTCTGTGTCAGTGAAACAGGGATGTATAAGTAGAGCACACATTT
TTAACTCTCTTGTTAGTAAACTTTTTTATCACTTCAAATACGAGGCCAGT
GTTCTTGACTTTAAGAATTATTGGATCAGGTTGACATTACAGGGCCCATG
GACGCAAAGCGTATCAGTCATTCTCACTGATAGGCTAAGCCTTGTCAACC
TGATACGAATTACTTTAACTATGTGAAAATAGTAGATACGACTGTGCAAA
ATATTGGATATTCTATAAAGAATACTTGCTCTAGCGTTTTAGCATAATAC
CAGACGAATAATGTCTACCCGTTTAAAACCTTgagtgtaaaattttaaaa
tattttctgctCTTAGCTAATGATCAAGCTGGGACAGACAACCAAGCATC
ATCCAACGACGGCCAATTCTTTCAAACCACGACCAATATCATTCTCATTG
CAATCACCCTGGTTGTGTTGACTTTCGTTTGTGTTCTCTTGGTTTTTGTT
GGTTTGCGTCGTCATCGAAATGGTTCAAGAAAGAATGGTACTAAAATGGA
GATGAATTGA Coding sequence (CDS) from alignment at sc0000026_pilon:310508..314517+ >XLOC_044536 ID=XLOC_044536|Name=XLOC_044536|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2346bp|location=Sequence derived from alignment at sc0000026_pilon:310508..314517+ (Clytia hemisphaerica_ch_hm2_pilon)
AGAAACATGAAGATTTTATGGTTGTCAATCATTTGTATCTCGTATTTATC
GATGGTCGTCCAAGCCAAATCAAAGAAACATGAAGATTTTATGGTTGTCA
ATCATTTGTATCTCGTATTTATCGATGGTCGTCCAAGCCAAATCAAACTT
CTCAATAGAATGTGATACCCAAAAGATGACTATTTACATTCTTAAAGATA
CAATTTCAATCCCTGAAAGTGATCTTTCTCAATACAATATTTCATGGTAT
GATTCTACTTGTGGACCAAGTGGAAAGTCCAATGAAACGCATTTGATTTT
GGAGGCTGGTTATTCGTCTTGTGGGACTCGAGCTATCGACAATGGCAATG
ACGTGACTTTTAAAAATCAGACTTCTCAATAGAATGTGATACCCAAAAGA
TGACTATTTACATTCTTAAAGATACAATTTCAATCCCTGAAAGTGATCTT
TCTCAATACAATATTTCATGGTATGATTCTACTTGTGGACCAAGTGGAAA
GTCCAATGAAACGCATTTGATTTTGGAGGCTGGTTATTCGTCTTGTGGGA
CTCGAGCTATCGACAATGGCAATGACGTGACTTTTAAAAATCAGGTTTCG
GTCAATTTGAACGCTACAAACGCATATAAAAACAACTTATTGGAAAGGAT
TGATACCTTTGCCACATATTCTGTTGAATGCAATGTCCCACAAGGTGTGA
ATGTAACACATGAATATGGAGCCAATATCACCAAAGCTGATTTGGTCGAA
GGAGTATCAAGTTTCGGTCAATTTGAACGCTACAAACGCATATAAAAACA
ACTTATTGGAAAGGATTGATACCTTTGCCACATATTCTGTTGAATGCAAT
GTCCCACAAGGTGTGAATGTAACACATGAATATGGAGCCAATATCACCAA
AGCTGATTTGGTCGAAGGAGTATCAAGTTCGACCGACCAATTCACTGTCT
CAATGAATCTACATAAAGACTCAAACTTCAATAAAAGTCTTCAATATCCT
GCAGTTATTGATAGATTGGGACGTTTCAATTTGGAACTTGAAATTGACAC
TGTTGCTGAACTGTCAATTATTCCACGAAACTGTCATGGTACTTTAACTT
CAAGCCGAGACGATGGTATTCGGGAAGATCTTATCACTGACGGGTTCGAC
CGACCAATTCACTGTCTCAATGAATCTACATAAAGACTCAAACTTCAATA
AAAGTCTTCAATATCCTGCAGTTATTGATAGATTGGGACGTTTCAATTTG
GAACTTGAAATTGACACTGTTGCTGAACTGTCAATTATTCCACGAAACTG
TCATGGTACTTTAACTTCAAGCCGAGACGATGGTATTCGGGAAGATCTTA
TCACTGACGGATGCCCCAATGCTGaccatgttttcaaaaaagaaactgCA
GCTGACAGTGGAAAGAAATTCCGATTTTCATTGAACGTATTCCGATTCAA
AAACTCAAACGGCATGGTCTACATTCATTGCTCCGCTCACGTCTGTTTGA
AAAACAGCAACGAAACAAACTGTCAATTTGGTTGTGAGCAAAATAGCAGA
CGGCGAAGACGTTCAGTGGAGGATAATGCTTTGACAACACTTGATCATAA
TCTTTCCAAAGATTATGACATCCGAACTGGATTAATTATTGTCACTGAAA
ACTCTAAAGATGCCCCAATGCTGaccatgttttcaaaaaagaaactgCAG
CTGACAGTGGAAAGAAATTCCGATTTTCATTGAACGTATTCCGATTCAAA
AACTCAAACGGCATGGTCTACATTCATTGCTCCGCTCACGTCTGTTTGAA
AAACAGCAACGAAACAAACTGTCAATTTGGTTGTGAGCAAAATAGCAGAC
GGCGAAGACGTTCAGTGGAGGATAATGCTTTGACAACACTTGATCATAAT
CTTTCCAAAGATTATGACATCCGAACTGGATTAATTATTGTCACTGAAAA
CTCTAAAGCTAATGATCAAGCTGGGACAGACAACCAAGCATCATCCAACG
ACGGCCAATTCTTTCAAACCACGACCAATATCATTCTCATTGCAATCACC
CTGGTTGTGTTGACTTTCGTTTGTGTTCTCTTGGTTTTTGTTGGTTTGCG
TCGTCATCGAAATGGTTCAAGAAAGAATGGTACTAAAATGGAGATGAATT
GACTAATGATCAAGCTGGGACAGACAACCAAGCATCATCCAACGACGGCC
AATTCTTTCAAACCACGACCAATATCATTCTCATTGCAATCACCCTGGTT
GTGTTGACTTTCGTTTGTGTTCTCTTGGTTTTTGTTGGTTTGCGTCGTCA
TCGAAATGGTTCAAGAAAGAATGGTACTAAAATGGAGATGAATTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000026_pilon | genome | sc0000026_pilon:310508..314517 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 994-1185:3819 |
| Aaloc | 694-990:2782 |
| Aaloc | 478-690:2225 |
| Aaloc | 310-474:1835 |
| Aaloc | 88-309:829 |
| Aaloc | 13-84:1 |
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