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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000160_pilon:626096..628303- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_044516 ID=XLOC_044516|Name=XLOC_044516|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2208bp|location=Sequence derived from alignment at sc0000160_pilon:626096..628303- (Clytia hemisphaerica_ch_hm2_pilon)
GTAGGATCGGATGAGAAGCAGAGAATTCGAAGTGCATTAGATGATATCAT
GGAAGCTGCCAGATGTCTTACATTCCAAGAATTCAATGTCGGTGCATCAA
ACGTACCAACAGCCCACGTTCGAGTCATCAAAAGTTCAGGGTAAGGTACC
AGTGAACTGTCTCATACCCAGAGCCACTTACACTAATTTTTTGTACTTCA
ATGATGGACGTGGAGATAATCGTCCGCGCAATCAGAGTTATAAAAAACAA
ACTAAGGGACTGTGTTCGAGCTTGGGAGATGAGTTGTCGAAAACATGGAA
GGCCCAATCTAATAGGGGAAGGCATTAACAAGAAAGCTTAAGTCCCTCAC
TATTTTGGTAAAAAATATTTCTGAGCCTTGAAGGCACTAAATCAACACGT
TTAGCCCCTCAATTTTTAAAATCTGTGTTTAAAACCATAGCAGACTTCTT
TAATTTACTCATCTCTAACACTGAGTCCCTGAGTTCAACTCTCAAACCTG
CATTTCTTACAAACCTTTGATAATTCAAATTTCTAAATAATTTCTTATAA
TTACTTTTTCTTTAATTCTTTCCAAAAGTCCGTGGATCATCTGCGCTTAT
CTCGGGTAACTCCTGCAATCACAAATTTACTCCTCTCCGTCTCATGGCTC
TCCTAAAGTCCCAATATTTCGATACCACCAATCAACTCTTATAATAATCA
TTATGAAGTTTTAGACAGAAATTTCTAACCTGTGTCTATTTTTTAGATGT
TGGTCATTGGTTGGCCGTACAGGACGTCAACAAGATTTATCGTTAGGTAA
TGGTTGTGTTTACACTGGTACCATAATTCATGAATTTCTTCACGCTATTG
GATTCTATCATGAGCAGAGTCGACCTGATCGTGATTCATACATCCGAATC
AATTGGGGGGACATCCAATCAGGACGTGAACATAATTTCAATATACAGAA
GAATATCAACAGCCTTGGTATCAAGTATGACCCGAAAAGTGTCATGCATT
ATTCAAAGTAAATTATTTTACCGTACCTCGTAAAAAATTTTTTTATAAAA
AGCGTGTGCAAATCCCATGAGATTGTTGGTTTCAAAGAGCTTTTAAGGGC
AACCCTGTTTCTTTAATCTCCAAACCATGGAAAGTGAAATTTCCATACAT
ATTATAGTACCAAGATTTTCTTTTTCCATATCGGAATTTCATTTTTCTCC
ATTGGCTTATATTTTTGCGATGAGTAGAAGACACAAATTCAGGAAAAAAT
ATTAAAAGGTGGTAGAGTAAGATTCGTTGAACACGGAACTTGTACAGAGC
TTAATTCTTACCTCTCAACTTTACAGTGGTGCTTTCGCCAAAAGCAGAGG
ATTGAAAACGATTGAATGGAAAGCCGATCCTTCCATGTCTCTTGGTGGAC
GAGTTTTAACAGCGAGTGATAAACAACAAATCAATCTCAAGTACTGTAAA
GGACCAGTAACAACTACTACAACTCGTACCACAAAAACTCGACCAACTCG
ACCAACAACTCGATCAACTCGACCAACAACTCGACCAACCCGACCCACAA
AATCCACTGTTAGACCGACAGCTCCTCCAACTGAAGGTAAGTCAACAAAT
ATCAACAAATGAAAATTCTTTACCGCACTCAATAATCCAAAGTCATATTT
TCCGAGGGTAAAATAAATTTGAGACCCCAAACAAAAGCTTCCTTTTGTTT
CTTTCCTTAATCGTAAACAGCATCATACCAAGATGGTATATGGGAAATAA
ACAAAAATCGATCTCGGTGACGACAGGAAAGAACATTTCACTTATCATAA
GATCGGAAAAAACTTTTTGCTGAAAAATTCTTCCCCAACGAAAAATTCTT
AAAAGACGTTCCAGACCCTTCTTCTGTAAGAATGTAAAAGTAGAAAGAAA
GACCTTACTTTTTACTGTATGAATAATCTATTCTACTCGTAGTTTGTGGT
GACAAATCAGGATTTTGTATCAGTGCTCGCCGATACCAGGGACGTTGCGG
GACTCGATTATCCTTTCTCTGTCCAAGATCATGCAGAAAATGTACTGGGC
CCGAAGATGAGAAATGTTTGAACTTGAAAGACCAGCGAAACAATTGTTTG
AGGAAATCACAAAAAGGAGAATGTCGAATCCGTAATTACCGTCGAAAATG
GAGAATGAAGAATGATTGTCCAAGAACATGTTGCGAACGTGGTGAGCTTT
ATAAATAA Coding sequence (CDS) from alignment at sc0000160_pilon:626096..628303- >XLOC_044516 ID=XLOC_044516|Name=XLOC_044516|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1854bp|location=Sequence derived from alignment at sc0000160_pilon:626096..628303- (Clytia hemisphaerica_ch_hm2_pilon)
GTAGGATCGGATGAGAAGCAGAGAATTCGAAGTGCATTAGATGATATCAT
GGAAGCTGCCAGATGTCTTACATTCCAAGAATTCAATGTCGGTGCATCAA
ACGTACCAACAGCCCACGTTCGAGTCATCAAAAGTTCAGGGTAGGATCGG
ATGAGAAGCAGAGAATTCGAAGTGCATTAGATGATATCATGGAAGCTGCC
AGATGTCTTACATTCCAAGAATTCAATGTCGGTGCATCAAACGTACCAAC
AGCCCACGTTCGAGTCATCAAAAGTTCAGGATGTTGGTCATTGGTTGGCC
GTACAGGACGTCAACAAGATTTATCGTTAGGTAATGGTTGTGTTTACACT
GGTACCATAATTCATGAATTTCTTCACGCTATTGGATTCTATCATGAGCA
GAGTCGACCTGATCGTGATTCATACATCCGAATCAATTGGGGGGACATCC
AATCAGGACGTGAACATAATTTCAATATACAGAAGAATATCAACAGCCTT
GGTATCAAGTATGACCCGAAAAGTGTCATGCATTATTCAAAATGTTGGTC
ATTGGTTGGCCGTACAGGACGTCAACAAGATTTATCGTTAGGTAATGGTT
GTGTTTACACTGGTACCATAATTCATGAATTTCTTCACGCTATTGGATTC
TATCATGAGCAGAGTCGACCTGATCGTGATTCATACATCCGAATCAATTG
GGGGGACATCCAATCAGGACGTGAACATAATTTCAATATACAGAAGAATA
TCAACAGCCTTGGTATCAAGTATGACCCGAAAAGTGTCATGCATTATTCA
AATGGTGCTTTCGCCAAAAGCAGAGGATTGAAAACGATTGAATGGAAAGC
CGATCCTTCCATGTCTCTTGGTGGACGAGTTTTAACAGCGAGTGATAAAC
AACAAATCAATCTCAAGTACTGTAAAGGACCAGTAACAACTACTACAACT
CGTACCACAAAAACTCGACCAACTCGACCAACAACTCGATCAACTCGACC
AACAACTCGACCAACCCGACCCACAAAATCCACTGTTAGACCGACAGCTC
CTCCAACTGAAGTGGTGCTTTCGCCAAAAGCAGAGGATTGAAAACGATTG
AATGGAAAGCCGATCCTTCCATGTCTCTTGGTGGACGAGTTTTAACAGCG
AGTGATAAACAACAAATCAATCTCAAGTACTGTAAAGGACCAGTAACAAC
TACTACAACTCGTACCACAAAAACTCGACCAACTCGACCAACAACTCGAT
CAACTCGACCAACAACTCGACCAACCCGACCCACAAAATCCACTGTTAGA
CCGACAGCTCCTCCAACTGAAGTTTGTGGTGACAAATCAGGATTTTGTAT
CAGTGCTCGCCGATACCAGGGACGTTGCGGGACTCGATTATCCTTTCTCT
GTCCAAGATCATGCAGAAAATGTACTGGGCCCGAAGATGAGAAATGTTTG
AACTTGAAAGACCAGCGAAACAATTGTTTGAGGAAATCACAAAAAGGAGA
ATGTCGAATCCGTAATTACCGTCGAAAATGGAGAATGAAGAATGATTGTC
CAAGAACATGTTGCGAACGTGGTGAGCTTTATAAATAATTTGTGGTGACA
AATCAGGATTTTGTATCAGTGCTCGCCGATACCAGGGACGTTGCGGGACT
CGATTATCCTTTCTCTGTCCAAGATCATGCAGAAAATGTACTGGGCCCGA
AGATGAGAAATGTTTGAACTTGAAAGACCAGCGAAACAATTGTTTGAGGA
AATCACAAAAAGGAGAATGTCGAATCCGTAATTACCGTCGAAAATGGAGA
ATGAAGAATGATTGTCCAAGAACATGTTGCGAACGTGGTGAGCTTTATAA
ATAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000160_pilon | genome | sc0000160_pilon:626096..628303 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 664-927:265 |
| Aaloc | 403-660:882 |
| Aaloc | 142-399:1462 |
| Aaloc | 1-138:2209 |
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