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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000108_pilon:686191..687258- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_044488 ID=XLOC_044488|Name=XLOC_044488|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1068bp|location=Sequence derived from alignment at sc0000108_pilon:686191..687258- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGATTTAAGCAAAGGAAAAATGAGAATCATCTCTGTTGGGCCAACAGG
TGTTGGCAAATCAACAATTGGAAACAAGCTTCTTGGCCTATCGCCTAATG
ACTTTCGATACTTGAAAGCAGAAGCATCATCGATGAGTTGTACTCAAGTT
CCTGTGACAGTTCAAAAAGGGAATGTTATGTATACTGATGTACCTGGGTT
GCCAGATACTAATCCAGATAAAACAAAGATCTTTTATGATGTTATCATAG
AAGAAGCTAAAAAACCACTCACTGCTATTTTCTTTGTTTTTGCGGTCGAT
ATGAGAATGGATAAAGCAACGAAAGATCGGATTAGGAATTGTTCATTGCT
TTTCAATGAAATCAATAGATGCTCTGCTGCTAAGATCCTGATTCTAAACG
ACATAAGATCTTGGAGCAATCCAAATTGCTTAGATGAGAAAAGTGAGGAA
TACAAGACAGAAAAAGCCATATATGACCAAGTTCGTCTTGACGCACAAAA
ACACTACGAACAAGATATTAAGAATACAACGGGAATCGAGTTTTATTGCA
CCAAAGTCATCAATGGTATTAACAAAAAGATAAATCCAGATAATAACATG
AATGTAGTCTTGCATTACCTGGAATTGACACTTCAGAGTTTCCCTTGTGA
AGCATCACCACATTTACGTAATTTTAAAATGTTGGAAAAAGTTGTGACAA
ACGCGAGGGAAAATTGTGACTTTGAGCAACAGTTAATTGACGATCAAGAG
AAAATTATTAAAAGTTTAGAAAAGTCAATTTCCGCTTTAAAAGTTACGGA
AGGAGTTTCTGTAGGCGCAGTTGCTGTAGCAGCTGTTGTTACAGCTTTTT
TTACTACTGGTGTTTCATTAGTTATTGCAGGTGTCGCTGCTGGTGTTGCA
AAATTGACTATAGTAGCGTCGACGAAAATAGCAATTGCTTTGAAGGAAAA
AGAGTTGAAAAGTGTGAAAGAAAAATTGAACAAGGACAACCTGAAAAAAT
ATATTTCTGAATATAAAGAACAATGTAAATTATTTGAAGATTTAAAAGCA
GCTCTTAATGAACGATAA Coding sequence (CDS) from alignment at sc0000108_pilon:686191..687258- >XLOC_044488 ID=XLOC_044488|Name=XLOC_044488|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2136bp|location=Sequence derived from alignment at sc0000108_pilon:686191..687258- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGATTTAAGCAAAGGAAAAATGAGAATCATCTCTGTTGGGCCAACAGG
TGTTGGCAAATCAACAATTGGAAACAAGCTTCTTGGCCTATCGCCTAATG
ACTTTCGATACTTGAAAGCAGAAGCATCATCGATGAGTTGTACTCAAGTT
CCTGTGACAGTTCAAAAAGGGAATGTTATGTATACTGATGTACCTGGGTT
GCCAGATACTAATCCAGATAAAACAAAGATCTTTTATGATGTTATCATAG
AAGAAGCTAAAAAACCACTCACTGCTATTTTCTTTGTTTTTGCGGTCGAT
ATGAGAATGGATAAAGCAACGAAAGATCGGATTAGGAATTGTTCATTGCT
TTTCAATGAAATCAATAGATGCTCTGCTGCTAAGATCCTGATTCTAAACG
ACATAAGATCTTGGAGCAATCCAAATTGCTTAGATGAGAAAAGTGAGGAA
TACAAGACAGAAAAAGCCATATATGACCAAGTTCGTCTTGACGCACAAAA
ACACTACGAACAAGATATTAAGAATACAACGGGAATCGAGTTTTATTGCA
CCAAAGTCATCAATGGTATTAACAAAAAGATAAATCCAGATAATAACATG
AATGTAGTCTTGCATTACCTGGAATTGACACTTCAGAGTTTCCCTTGTGA
AGCATCACCACATTTACGTAATTTTAAAATGTTGGAAAAAGTTGTGACAA
ACGCGAGGGAAAATTGTGACTTTGAGCAACAGTTAATTGACGATCAAGAG
AAAATTATTAAAAGTTTAGAAAAGTCAATTTCCGCTTTAAAAGTTACGGA
AGGAGTTTCTGTAGGCGCAGTTGCTGTAGCAGCTGTTGTTACAGCTTTTT
TTACTACTGGTGTTTCATTAGTTATTGCAGGTGTCGCTGCTGGTGTTGCA
AAATTGACTATAGTAGCGTCGACGAAAATAGCAATTGCTTTGAAGGAAAA
AGAGTTGAAAAGTGTGAAAGAAAAATTGAACAAGGACAACCTGAAAAAAT
ATATTTCTGAATATAAAGAACAATGTAAATTATTTGAAGATTTAAAAGCA
GCTCTTAATGAACGATAAATGGATTTAAGCAAAGGAAAAATGAGAATCAT
CTCTGTTGGGCCAACAGGTGTTGGCAAATCAACAATTGGAAACAAGCTTC
TTGGCCTATCGCCTAATGACTTTCGATACTTGAAAGCAGAAGCATCATCG
ATGAGTTGTACTCAAGTTCCTGTGACAGTTCAAAAAGGGAATGTTATGTA
TACTGATGTACCTGGGTTGCCAGATACTAATCCAGATAAAACAAAGATCT
TTTATGATGTTATCATAGAAGAAGCTAAAAAACCACTCACTGCTATTTTC
TTTGTTTTTGCGGTCGATATGAGAATGGATAAAGCAACGAAAGATCGGAT
TAGGAATTGTTCATTGCTTTTCAATGAAATCAATAGATGCTCTGCTGCTA
AGATCCTGATTCTAAACGACATAAGATCTTGGAGCAATCCAAATTGCTTA
GATGAGAAAAGTGAGGAATACAAGACAGAAAAAGCCATATATGACCAAGT
TCGTCTTGACGCACAAAAACACTACGAACAAGATATTAAGAATACAACGG
GAATCGAGTTTTATTGCACCAAAGTCATCAATGGTATTAACAAAAAGATA
AATCCAGATAATAACATGAATGTAGTCTTGCATTACCTGGAATTGACACT
TCAGAGTTTCCCTTGTGAAGCATCACCACATTTACGTAATTTTAAAATGT
TGGAAAAAGTTGTGACAAACGCGAGGGAAAATTGTGACTTTGAGCAACAG
TTAATTGACGATCAAGAGAAAATTATTAAAAGTTTAGAAAAGTCAATTTC
CGCTTTAAAAGTTACGGAAGGAGTTTCTGTAGGCGCAGTTGCTGTAGCAG
CTGTTGTTACAGCTTTTTTTACTACTGGTGTTTCATTAGTTATTGCAGGT
GTCGCTGCTGGTGTTGCAAAATTGACTATAGTAGCGTCGACGAAAATAGC
AATTGCTTTGAAGGAAAAAGAGTTGAAAAGTGTGAAAGAAAAATTGAACA
AGGACAACCTGAAAAAATATATTTCTGAATATAAAGAACAATGTAAATTA
TTTGAAGATTTAAAAGCAGCTCTTAATGAACGATAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000108_pilon | genome | sc0000108_pilon:686191..687258 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 925-1083:160 |
| Aaloc | 823-918:256 |
| Aaloc | 1-813:1069 |
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