XLOC_044456 (mRNA) -

Overview
NameXLOC_044456
Unique NameXLOC_044456
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000001_pilon:2362515..2363127+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_044456 ID=XLOC_044456|Name=XLOC_044456|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=613bp|location=Sequence derived from alignment at sc0000001_pilon:2362515..2363127+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAACAGTCTTGTTGCATGTAGTacctattttcgaaaaaagaactATGC CACATGGAGACACCCTCGTTCGAAGCTTCCACACCAGATCGATCACATTT TAACActgaaaactgatttttgtcgaattattgatgtttttgtttcaaaa ccACTGCTAGATTCAGACCATCTCTCTGTGAGAATGAAATTACGTGTCGC ATATCGTTTCTTCAAAAAATCTGCAACCAACCGACCGCTCTCGAAATTCG ACTCAATCAAATTACTTAATGACGGGGAATTACGTGGAAGGTTCAATAAT ACCCTTTCGTCAAAAATCGAAACTCTAGATCGTATAGAGTATGAATCGCT CGAAAAATCAATTCAAGATGCTGCATCGTCATGTTTACCTAAAATTAAAC GCTCTCCCCCAGACTGGTTTGTTGCAAACGAAGCTGAACTTATGAGCTTG ATCGAAAAGAGAAATATTGCTGTttacaacaaaacaaaatgcaTCACACG ACTTACAATTTCTGCCGCTATTCGAGCACGTAAAGAACTAAAGCAAGCTA TAAATACTGCAAAGAGTAAATAAATGGATTAAAAATGCATGTAATCGCTT GAATGAAGGTCCC

Coding sequence (CDS) from alignment at sc0000001_pilon:2362515..2363127+

>XLOC_044456 ID=XLOC_044456|Name=XLOC_044456|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1226bp|location=Sequence derived from alignment at sc0000001_pilon:2362515..2363127+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAACAGTCTTGTTGCATGTAGTacctattttcgaaaaaagaactATGC
CACATGGAGACACCCTCGTTCGAAGCTTCCACACCAGATCGATCACATTT
TAACActgaaaactgatttttgtcgaattattgatgtttttgtttcaaaa
ccACTGCTAGATTCAGACCATCTCTCTGTGAGAATGAAATTACGTGTCGC
ATATCGTTTCTTCAAAAAATCTGCAACCAACCGACCGCTCTCGAAATTCG
ACTCAATCAAATTACTTAATGACGGGGAATTACGTGGAAGGTTCAATAAT
ACCCTTTCGTCAAAAATCGAAACTCTAGATCGTATAGAGTATGAATCGCT
CGAAAAATCAATTCAAGATGCTGCATCGTCATGTTTACCTAAAATTAAAC
GCTCTCCCCCAGACTGGTTTGTTGCAAACGAAGCTGAACTTATGAGCTTG
ATCGAAAAGAGAAATATTGCTGTttacaacaaaacaaaatgcaTCACACG
ACTTACAATTTCTGCCGCTATTCGAGCACGTAAAGAACTAAAGCAAGCTA
TAAATACTGCAAAGAGTAAATAAATGGATTAAAAATGCATGTAATCGCTT
GAATGAAGGTCCCATGAACAGTCTTGTTGCATGTAGTacctattttcgaa
aaaagaactATGCCACATGGAGACACCCTCGTTCGAAGCTTCCACACCAG
ATCGATCACATTTTAACActgaaaactgatttttgtcgaattattgatgt
ttttgtttcaaaaccACTGCTAGATTCAGACCATCTCTCTGTGAGAATGA
AATTACGTGTCGCATATCGTTTCTTCAAAAAATCTGCAACCAACCGACCG
CTCTCGAAATTCGACTCAATCAAATTACTTAATGACGGGGAATTACGTGG
AAGGTTCAATAATACCCTTTCGTCAAAAATCGAAACTCTAGATCGTATAG
AGTATGAATCGCTCGAAAAATCAATTCAAGATGCTGCATCGTCATGTTTA
CCTAAAATTAAACGCTCTCCCCCAGACTGGTTTGTTGCAAACGAAGCTGA
ACTTATGAGCTTGATCGAAAAGAGAAATATTGCTGTttacaacaaaacaa
aatgcaTCACACGACTTACAATTTCTGCCGCTATTCGAGCACGTAAAGAA
CTAAAGCAAGCTATAAATACTGCAAAGAGTAAATAAATGGATTAAAAATG
CATGTAATCGCTTGAATGAAGGTCCC
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_044456XLOC_044456-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000001_pilongenomesc0000001_pilon:2362515..2363127 +
Properties
Property NameValue
Aaloc568-609:572
Aaloc1-567:1