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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000250_pilon:483306..487601+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_044371 ID=XLOC_044371|Name=XLOC_044371|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4296bp|location=Sequence derived from alignment at sc0000250_pilon:483306..487601+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCACATCAGAAGGTTGATGTCAAGGTTGTTTTGCTTGGAAAGGAATA
TGGAGGAAAGACAAGTCTAGTTGAACGATATATTCACGAGAGGTTCAATT
CAAATCAGCCTTACCAAAATGTGAGTTTTTTCCTATATCTTATGGAATAT
TTCATGTATAGTTTGTATTCTCAATTGTAAATTTCTCTAAAAAGTTTGCA
CTTTTAAAAAGTCTTAGATCCTTGTGTTTCTCTTTCATTTTTAGACAATT
GGAGCAGCCTTTGGGGCAAAAACATTACACATCGATGGAAAATCAGTAAC
ACTTGGGATATGGGTTCgtcacttttttatttcataaattaataagaaat
atttcaacaaaagTAAATATTCAACAACCTTGAAATAACCATGATAAGAA
ATTAAGGGAGATTTTATTATGGTTGTATTTGTGTATTATTCTATCAGATA
ACATTATTTGAAGCATGAAAGAAGCAACGTTTTCATATTTgtacaaataa
aatttatatcaTTCTAGGATACTGCTGGCTCTGAGAGGTATGAAGCGATG
AGCAGAATATATTATAGAGGTGCAAAAGCTGCCGTTGTTTGTTTTGGTCA
GTATTGTCCCTTTCTATGAGTATTTTCTCCACAATTTTCTAGGCTCTTAT
TTTTGATTATGATATCATTTTGATTATGATATCAAATCTATTTTGTTgat
gaattttctaaattacTTCTATCAACAATACATGTTTTACACCATTTTCT
ATCTCGCTCAAAGATGTAGACACTCAtcattctttgttttcttttcgaaC
TAGATTTAACGGATGATAATAGTTGGGACAGAGCAAGATTTTGGATTCAA
GAAGTTCATGGGCATGAAGAGGTactaaatttgttttaaatttttttcaa
atattatacaATAAAAATGATACGCATCAACTAAAGTCTTCCCAAAATGA
GAACGAGAAGCTATCAGGTGAATCATCACTCCCATGGTGTGGGTACGCAG
ACGACCTGATACTTTTCTTGACTGATCTTTCATCTCTACAATCAGCGTCA
ACACTTCTAGACAACTTATTCGTTAAATTTGGTCTTCGAATCAACGAAAC
CAAAACCGAGACGATGATTCTCAATCACTGCTACCTCGAGACAAACTATC
CTGATAGCATCATTGATATTCGCAATGTCCCGTTGAAAAATTCAGGCCAG
TTCAAATATCTTGGTTCGCACATCTCTCCAAATGCGCCTAATACCGGAGA
CATTGAAATCAACTATCGCATTCAGATGGCACTTGGAAAATTCGCAAGTA
TGACAAACCTCCTTCAGAATCATGGAATTCATCTATCTACAAGAGTTAAA
TTTTTTAACTCCTTTGTGAGAAGTAGACTAACGTACTCTTGTCAGAATTG
GAATCTGACCGCAGTGCAATTTGATAAGCTTGATTCAACGTACAGAAGTC
TACTTCGCAAAATGATACGACGTGGTTTCAGTCGAGTCGATACTGAAGAA
GGAGACTTtcgattaaaaattaataaCGCTAAGCTCCATTCTATCTGCCA
TACTGAAGACGTCAGTAGTTTCATTCGAAAACAGCAAAAGAATTATGCAG
GACATGTCGTTCGAATGTCTGTAGATCGTGGTATTAAACAGTTAATGTTT
AATTCCGATAAATATCATAGAATCGGAAGAACAACTCCCTCTCTCCTAGA
GCAGGTGTTGTCAGATAACAATTTGACTATCGACAgatttataaatttga
atatgaaaaagtgatttttaccTAACAATTTTTTATGATTAAAGTTTGAC
TTAGGTCCTATTTACTAGTTATAGTTTGTAtggtaaaataatatatatat
atataattacTTTAActcacttttaaaaatttttcttaaagtaCTTTGCT
TATAATTGACAtttaataattaaaaatatatcAAGTGAAAACACGAGAGG
AATTGTCAATAATTTCCATCAGAGTCATGGAAATGATATCAGGATttagt
aaaaagtaaaaaacaaccATGACACCATGTACATGAGTCAAACTATGTTG
TGAAAAATGcaattgatttttataaaagattgTAAAAAATGAACTTAAAT
ATCAAATTGTATATTACTATTGTTTAGGAATGCAAAATTTATCTTTGTGG
AACTAAACGCGATTTATTGGAGCACCAAGACCGTGCAATTGACTATCACG
ATACAACTGATTATGCAGATACCATAAGTGCAAAGTTATTTGAAACTTCA
AGCAAAACAGGAGAAAATATTGGTTGGTAGAATTCATTTGTTTAGATTTT
ATGTAATGAAAATGACTAGAATTATCCCTTtccatgaaaacaaagaattt
caAAGAGTCACTTTCAATAATATAGAAccagggggggtcatgcagttatt
atataaacactatgacaattactaccgtggtggtatataaaccaaaattt
gggaaaacagttactccaccagtggactaactgcaacatgggtggtgcct
aagcccaaaattttcgattttggtaggatatggtgtactaagtgagcaca
tttttcaatttttcacttaaaattttaggtttttaaaaattccagaagcg
aaaaaattcaaaacatgtttttcaaaagtcaaaaaaaatcacaaaatttt
ttcttcaatcaaggcatgaaagatattttaacaaacttggaaaatgattg
agatatttcactcttgaacggtcgttaataagacgtacccagtaaaatga
tatcaaaaatgaggaattcagttaaaaaattgccaaatttggcatttttg
ggggtggtatacaccaattttgagggtaaaatcagttagtacactatgga
ataactgcaagggtggtggtgtctgtagaaaatgtctaaaattgcagtta
ctccacatagtgtcaaggagtaactgcaagaccccccccccctgatagaA
CACTAATTACAAAGTTTCAAACTTTGATTCTTAAAAGATCTATAGATATC
AAGTAATTTATGTACATTTTTGATTTGTAGAGGAACTGTTCACTGAGATT
GCCACTGAATATATGAAAATTGGAATGTCGAGTGGTAAGTTGCCTGAACT
AAATTTAttgtattgggctcttccagaaaaaatccgttcatggggggtgg
aggatgaattgtccaggggtattgaaaaaataccaaaaaattgcaatgtc
cagggggtaaattgcaatgtccaggggtaattttttgtgtccacggggtt
gatttgatgtttgtccaggggtataacccgtgtccagagGGTTagaaatc
aaaatgtccaggggtaattcatgaaaaaaataatatatcctccgcCCCCC
ATGAACCtgcatgaacggattttttctggaagagcccatttattCCTTTT
TGAAAGACAAAAGTTAAAGAGGtttttttCCGAAAGTTTTGTAACAAAGA
TATCTTTACAATCATttggccagggggggggggtcggtagtaaaatatca
gacataatgacgtttactacggtggtggtgtgacgaaaaatcgaaaacaa
attttactacccagggtagttattttaaatactaaaatgggtggtatcta
tgttttaaatgttgaaaattaaaaaattttactacctggttagttaaaac
tggtaaaattagcaaattttaagctatttttgtaattattttaatttttt
ggatgacttatctgaaaaaatctaaaaaattttataactcaaaaagattt
tctgttggaaagggcaaacattaatttttgcacaaagtgaaaaatgtgtc
acaaaaataatcattttttagctttttttgtaaaatcagtccgaaaagca
accaaaaaataggtggtctttatgacaaattgtctcaaaaacttttacta
ccagggtagtaaaatacctcttccaagagtctgggtggtggtatataaaa
attcgtaaaaatcatatatgtctgagattttactaccggtCCCCCCTGAT
TTAAACTGCTCTACTCGTTTTATCTGATTATTTCAGATTCATtgcttttc
aaacaatcaagtGAACTCTTTTTCTAGAGAAAAGTCAGTATAAGCCTTTC
ATCTTAAAATAATAGAGAATGCGTGATTTGTATCTATACCAAAATCAACA
GCTCCATAATATCTTATAGGGATAATTATTTTGATCtatttgtttttcgt
ttttttttctcatcagTTGAGGATCCAAACATTGTGAATATGAATCAACG
AACAACACAGTCTGAAGGTGGCTGGAAAAAATCATGTTGTGGATga Coding sequence (CDS) from alignment at sc0000250_pilon:483306..487601+ >XLOC_044371 ID=XLOC_044371|Name=XLOC_044371|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1230bp|location=Sequence derived from alignment at sc0000250_pilon:483306..487601+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCACATCAGAAGGTTGATGTCAAGGTTGTTTTGCTTGGAAAGGAATA
TGGAGGAAAGACAAGTCTAGTTGAACGATATATTCACGAGAGGTTCAATT
CAAATCAGCCTTACCAAAATATGGCACATCAGAAGGTTGATGTCAAGGTT
GTTTTGCTTGGAAAGGAATATGGAGGAAAGACAAGTCTAGTTGAACGATA
TATTCACGAGAGGTTCAATTCAAATCAGCCTTACCAAAATACAATTGGAG
CAGCCTTTGGGGCAAAAACATTACACATCGATGGAAAATCAGTAACACTT
GGGATATGGACAATTGGAGCAGCCTTTGGGGCAAAAACATTACACATCGA
TGGAAAATCAGTAACACTTGGGATATGGGATACTGCTGGCTCTGAGAGGT
ATGAAGCGATGAGCAGAATATATTATAGAGGTGCAAAAGCTGCCGTTGTT
TGTTTTGGATACTGCTGGCTCTGAGAGGTATGAAGCGATGAGCAGAATAT
ATTATAGAGGTGCAAAAGCTGCCGTTGTTTGTTTTGATTTAACGGATGAT
AATAGTTGGGACAGAGCAAGATTTTGGATTCAAGAAGTTCATGGGCATGA
AGAGATTTAACGGATGATAATAGTTGGGACAGAGCAAGATTTTGGATTCA
AGAAGTTCATGGGCATGAAGAGGAATGCAAAATTTATCTTTGTGGAACTA
AACGCGATTTATTGGAGCACCAAGACCGTGCAATTGACTATCACGATACA
ACTGATTATGCAGATACCATAAGTGCAAAGTTATTTGAAACTTCAAGCAA
AACAGGAGAAAATATTGGAATGCAAAATTTATCTTTGTGGAACTAAACGC
GATTTATTGGAGCACCAAGACCGTGCAATTGACTATCACGATACAACTGA
TTATGCAGATACCATAAGTGCAAAGTTATTTGAAACTTCAAGCAAAACAG
GAGAAAATATTGAGGAACTGTTCACTGAGATTGCCACTGAATATATGAAA
ATTGGAATGTCGAGTGAGGAACTGTTCACTGAGATTGCCACTGAATATAT
GAAAATTGGAATGTCGAGTGTTGAGGATCCAAACATTGTGAATATGAATC
AACGAACAACACAGTCTGAAGGTGGCTGGAAAAAATCATGTTGTGGATga
TTGAGGATCCAAACATTGTGAATATGAATCAACGAACAACACAGTCTGAA
GGTGGCTGGAAAAAATCATGTTGTGGATga
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000250_pilon | genome | sc0000250_pilon:483306..487601 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 538-615:4219 |
| Aaloc | 484-534:3033 |
| Aaloc | 337-480:2128 |
| Aaloc | 271-336:806 |
| Aaloc | 190-267:518 |
| Aaloc | 121-189:245 |
| Aaloc | 1-120:1 |
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