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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000250_pilon:172096..176550- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_044324 ID=XLOC_044324|Name=XLOC_044324|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4455bp|location=Sequence derived from alignment at sc0000250_pilon:172096..176550- (Clytia hemisphaerica_ch_hm2_pilon) ATGCCTCGGAAAAAGCTTCCAGACCGTCAGACTATTGAAGACCAAATGGA
CGAGCATTTTAACAACATTCTCCTCTCAAAAACTAATTACTCAAGTAATG
ACTTATACGAGAGATTCCCTCAACAAATGCGTGATGGTCTTGCTAACGCC
AAGCAATGTTATTTCAAAATGTTTGATGATTTCAAGCAAGCATTGGATGA
GATTCCATATTTCAACGATGTGTTTAGTCATAACACTGGCAAAGGATTTC
TGGGAGGAATGGATCGAGAACACGTGGAAAAGTTACATTTAATGGATCTG
AAAAAACAGATTATGATTGGGGAAGTTGTATCGGCTTTGTTATCAGGTAA
TCAATTTTTACTACTTTTACTTCGTACTACGCCTAATTTCCTTAAAATGT
AGGTTTTCCAGGCTCAAGGTTGATTCTTTAAGTTTAGGTTTTCCAGGCTC
AAGGTTGATTCTTTAAGTACACGCTTTTTTTCTTTATAAGAATAGTTTAC
TTTGGATGAGGGTCAAATAAAATGCCAAAATTGAGGGTGAAATATGCTTA
ATGTATTTTTACTATTTTATTTAGACTTGACTTTTTTACAAACATGAGAA
ATGATCAATTTGAGAGTTTTGGACTTTGGAATGAACATTTGGAGCTAAAA
TTACATTTCTGCCTCAAAGTTTAAATTCAATTATAACAAAGGAAGCAGTT
TTTTCTGTTAACCAAATACAAAATGACTCAGGGCCGGCGAATCAATTTTG
AAAGTGGAGGGGCCAAATAGTAAGTGTCTAAGGAGGCGCCACCATGGTTG
GCGCCGACGGGCAGAGAAAGCAAAAAAGTGGGGGGGCCATGGCCCCCGGC
CCCCCCCCCCGTTTCGCCGGCCCTGTGACTGTATTCTTATCAAACTTTGT
GAAACTCACCCTAGAGGGTATTCTTAGGGTATTCTAACGATTTGGCCAAT
TTTCTCGGTTAGGGAAAAAAGTCATTGAACGAAAGGTGGCATGATGGTGA
AATCTTTCTTGACCAAAATCTGTTCAAGTCATGAGCTTAAAAACAGTAGA
ATTTCTTTTAAATCGAACCTATATAACTTGAATACCTCTTAAACTCGATC
AAGCTTTATGGTTCTTTCAGTTAATAGTGCCTTATGAACCGTACTCCATA
ACTCGATATTCAACTCGAACAAATTCGTTTTCCTCGTGCTTGTTCGAGTT
ATGGAGACTCCACTTGTATACATTTTTCTCTTTGTTTCGCTCTATACAGG
TAGCTTTGAGCAGTATGAGAGAACCAACGCGCCAAAATCATGGAAACGAG
ATGTGTTGGAAATGGAAGTGAGTTCTGACGACGAAAATGAAGATGGGGAG
GAAAGCGACGAAGAAGGAAATACTCAACAAAAGACACGTAAAGCAAAGAA
GAAAGCAAAGAAAAGCAAAAAACGTAGAGGTAATAAGACCTGATTTATAA
GAATAACGAGACTCAAAGATACCAGAAAACACATTTTTAAGTAGCTTGGA
ATGGCTGAATTTTAGAACGTGATATTAAGACCAATTTTAGTCTCAAAGTG
CCAAGAGATAAAAACAGCCAAGAGATTTACTGGTTCTTATAAAAAAGTGT
ACTCTTGTAGACACTATATGTTTTTTTTATAAACAAGTGTCTGTCCCTTG
GTCAGGCTGGTGTATGCTTAAGCCTCTAAAGCATCCAGTCATAGCCTATG
CTTATTATATGCTTTTTAATTATTATGCTTATAATTCAACCGAGCCAATT
CTTTGTAAAATCTAAGCAATTTTGTAAGTTAAGCATTCGATTTTTGGAGC
AGTGGAATTTGGCTAGTCATGGAATGTCTTTTTTTTTTTACTTCCAAATC
TTTACAGAAAAAAAATTGACTACTTTAAAAATATTTCAGGTTGGTGTATA
TGTCTAGGAAATCTGCAAATCTGAGCCTTCATATGCATACAGGAGTTGTG
CTTATAAAAAACATGTATTAGGATGAGCGGAAGTTAATTTATTTTCTGCC
AACTTTGATTCACATTTAGAATGTGCAGGACGAAGAGTCGATTGTCTGAA
CTAGTTGCTCCTTGTATCGCATTGTTAGCTAGAGAAAACTTCTGGAAAGT
TCAAGCAACTGCTGAAAAGGTTTCCTTTATTAATTTCATGGACTTTTACA
CAACAATTCCAAAAAAATCTTGTTTAACATTTAAGGTGGAGGCGCCAAGA
AAAAGACCAAACAAAAGCAACAGGACGAGCCTAAGTCAAAAGCTGAAGAA
GAAGAAGAGGAAGAGGAAGAAGGGAGCAGTTCTGCCAAGATGAACCCTAC
AGAACAAACAGAGCTGAAATTAACACTATCAAAAGGCTTGAATCCCTTAG
GAAGTGACCAATCAGCTCGCCCCATTCGTAACCGTGCTGATCGAAAGGTG
CAAGTGGTTAAAGAAACTGATGAAGGAACATTGATTAAATTCCGTGGTAA
ATATATCACCTTAGCCAGAGAATACGAATTTGAAGAGCAGCTAGATTATG
ATTATGGCAGAAATAAGTTTCACCTTGATCGTCTTAATAAAGATATGATT
AAAGTATGTGAATCGGTTGTCGATTTTCTTGATGTTGATATGGAGGCACA
GAGACAAGGTCTTTTTGACAACCTAACCAATATGTGGAATGAATGTCAAA
CAAGTTTAGTACCATCTGATGAGCAAACCCAGAAAATGGAAACCATTGCT
GAACTTGTCAGGAATCTGGGTATGGCTAAAGAGGATCATAGCTCTTTTAG
ACGTGGTAATAAAGATTGTTTGGAACTTCAACGTGTTCGTGATGAACGTA
ACCGGATCTGTATGGATCACTTTCTGAAATCGATCTGGCGACTTTTTGTT
GAAGACGATGCTGATATCGATGATGGTGATCGTTTCTCAGAGGAAGATGT
TGAATCAGCATTCTTGGTTAATGAACGAGATCGGGTTATGCTTATCCCGA
CATGTGATTGTCATGGTCCTTGTCCATGTTGTTGCTCCGGCTGTTATGAC
TATCGACATTTGAATATCACTCACAATGCAGAAGAAAGTAAACGTGGATT
TTATGAGAAACCACGACATCCTAACGATAACCGATCACGATTGAAGCATG
TGTTGAAGAAAGATAAATCGGCGACATCTACTGATGAACAAGGACGACCG
AAAATTGAGGAGCTGTCAGATAGTGAGGAGGAGGTTGAAGAGGATCTTAA
ACTAGCTGCAAAGAAACGAAGAGTTTTCTACCGGTTTGAAGATGTTGACC
AGGAATGGTTTGATGAATGTTCTCATTGTTGTTGCCAATGTGATCTCCAG
AAAATTGAGATGCTCCAAAACAAGATTAAACCTGAACAACCAACACCGGA
AACCTTTGAATCCTTTGCTATTGGATTTTGTGAGAAATTAGCAAGCTGTG
ATAATTTGAAATATCACAAATCGATTTTCAAGGAAGCTGCTTTCATCTCA
AGCGCTGGTTCTGACCATATGCTTCGACAGAAAATCCTTGAGATTTGTCT
TCCAATATTCATGGAGGCGATCAAGAAACGTGAAATGGGAACACGTATGT
ATCTGGTCCATCTGGTCCTGAAAATTACCATGTCCATGGTGGTGGCTAGG
AAGTATTGCTTTCGTGATCCAAACTTTTTCCAGTATCTTGCTAACATGCT
GACACCAGTTGATCCTTGTAAAAACCGCGACCCAAATCAATTGCGTGCCG
ACACCTGTCATTTGTTGTATGTATCGTTAATGGGTTGTGGTCGTGAGTAT
TTCATCAAAGTCTCCCGCACTAAAGCTTTTGAGCATCTCATCGATATTCT
ACAGTTGGTACCTGATAATCACAGTGATGCCCAGAGTGCTGAAGATGCTT
TCGGCTGTCTCACATTGTTCACTGATGAATGGGACTTGTTTATTCACAAA
TTCTCCAAAGCCCCAATCAATAAACTAATCGAAGAATGGCGTCGTTATGG
GCTCGAGTATGCTGGTGGTCTTCCAAACTTCATCTACACGCTGGAAAACC
TTAAAAAGAGGTTGTACTGTATTATTCATGCTTATCGAATGAATAAAATG
ACATTCAGGCTAGATAAAACATTCAATGCTGAAGCACTGCAAGAACACAG
TCTAGTTGGTTGCTCTAACCCGAAATGCTACAAGTTAAATTACACAACCC
TGGGTGAGTATAAATACAAGAAATGCTCAAAGTGTCATTTAGCTTATTAT
TGCACCAAAGCTTGCCAACTCACGCACTGGAAAACACATAAGAAATATTG
CGTTAAACCTATTTGGGAGACGGAGAAAGAAAAGCAATGTGACGTTAATA
GCAATGAAATTCCATCTATAGTACAACCGCCAAAGCCGCCAAAAACAACA
AGAAACTTTAACCCTAGCAATGAATCTAAGCTCAAATGTAGTATCACTGC
TGATATGGTTTCTAAGCTAGCCTCAAGTCAAGGAAGAATGACCCAACGGC
TGTGA Coding sequence (CDS) from alignment at sc0000250_pilon:172096..176550- >XLOC_044324 ID=XLOC_044324|Name=XLOC_044324|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=5592bp|location=Sequence derived from alignment at sc0000250_pilon:172096..176550- (Clytia hemisphaerica_ch_hm2_pilon) ATGCCTCGGAAAAAGCTTCCAGACCGTCAGACTATTGAAGACCAAATGGA CGAGCATTTTAACAACATTCTCCTCTCAAAAACTAATTACTCAAGTAATG ACTTATACGAGAGATTCCCTCAACAAATGCGTGATGGTCTTGCTAACGCC AAGCAATGTTATTTCAAAATGTTTGATGATTTCAAGCAAGCATTGGATGA GATTCCATATTTCAACGATGTGTTTAGTCATAACACTGGCAAAGGATTTC TGGGAGGAATGGATCGAGAACACGTGGAAAAGTTACATTTAATGGATCTG AAAAAACAGATTATGATTGGGGAAGTTGTATCGGCTTTGTTATCAGATGC CTCGGAAAAAGCTTCCAGACCGTCAGACTATTGAAGACCAAATGGACGAG CATTTTAACAACATTCTCCTCTCAAAAACTAATTACTCAAGTAATGACTT ATACGAGAGATTCCCTCAACAAATGCGTGATGGTCTTGCTAACGCCAAGC AATGTTATTTCAAAATGTTTGATGATTTCAAGCAAGCATTGGATGAGATT CCATATTTCAACGATGTGTTTAGTCATAACACTGGCAAAGGATTTCTGGG AGGAATGGATCGAGAACACGTGGAAAAGTTACATTTAATGGATCTGAAAA AACAGATTATGATTGGGGAAGTTGTATCGGCTTTGTTATCAGGTAGCTTT GAGCAGTATGAGAGAACCAACGCGCCAAAATCATGGAAACGAGATGTGTT GGAAATGGAAGTGAGTTCTGACGACGAAAATGAAGATGGGGAGGAAAGCG ACGAAGAAGGAAATACTCAACAAAAGACACGTAAAGCAAAGAAGAAAGCA AAGAAAAGCAAAAAACGTAGAGGTAGCTTTGAGCAGTATGAGAGAACCAA CGCGCCAAAATCATGGAAACGAGATGTGTTGGAAATGGAAGTGAGTTCTG ACGACGAAAATGAAGATGGGGAGGAAAGCGACGAAGAAGGAAATACTCAA CAAAAGACACGTAAAGCAAAGAAGAAAGCAAAGAAAAGCAAAAAACGTAG AGGTGGAGGCGCCAAGAAAAAGACCAAACAAAAGCAACAGGACGAGCCTA AGTCAAAAGCTGAAGAAGAAGAAGAGGAAGAGGAAGAAGGGAGCAGTTCT GCCAAGATGAACCCTACAGAACAAACAGAGCTGAAATTAACACTATCAAA AGGCTTGAATCCCTTAGGAAGTGACCAATCAGCTCGCCCCATTCGTAACC GTGCTGATCGAAAGGTGCAAGTGGTTAAAGAAACTGATGAAGGAACATTG ATTAAATTCCGTGGTAAATATATCACCTTAGCCAGAGAATACGAATTTGA AGAGCAGCTAGATTATGATTATGGCAGAAATAAGTTTCACCTTGATCGTC TTAATAAAGATATGATTAAAGTATGTGAATCGGTTGTCGATTTTCTTGAT GTTGATATGGAGGCACAGAGACAAGGTCTTTTTGACAACCTAACCAATAT GTGGAATGAATGTCAAACAAGTTTAGTACCATCTGATGAGCAAACCCAGA AAATGGAAACCATTGCTGAACTTGTCAGGAATCTGGGTATGGCTAAAGAG GATCATAGCTCTTTTAGACGTGGTAATAAAGATTGTTTGGAACTTCAACG TGTTCGTGATGAACGTAACCGGATCTGTATGGATCACTTTCTGAAATCGA TCTGGCGACTTTTTGTTGAAGACGATGCTGATATCGATGATGGTGATCGT TTCTCAGAGGAAGATGTTGAATCAGCATTCTTGGTTAATGAACGAGATCG GGTTATGCTTATCCCGACATGTGATTGTCATGGTCCTTGTCCATGTTGTT GCTCCGGCTGTTATGACTATCGACATTTGAATATCACTCACAATGCAGAA GAAAGTAAACGTGGATTTTATGAGAAACCACGACATCCTAACGATAACCG ATCACGATTGAAGCATGTGTTGAAGAAAGATAAATCGGCGACATCTACTG ATGAACAAGGACGACCGAAAATTGAGGAGCTGTCAGATAGTGAGGAGGAG GTTGAAGAGGATCTTAAACTAGCTGCAAAGAAACGAAGAGTTTTCTACCG GTTTGAAGATGTTGACCAGGAATGGTTTGATGAATGTTCTCATTGTTGTT GCCAATGTGATCTCCAGAAAATTGAGATGCTCCAAAACAAGATTAAACCT GAACAACCAACACCGGAAACCTTTGAATCCTTTGCTATTGGATTTTGTGA GAAATTAGCAAGCTGTGATAATTTGAAATATCACAAATCGATTTTCAAGG AAGCTGCTTTCATCTCAAGCGCTGGTTCTGACCATATGCTTCGACAGAAA ATCCTTGAGATTTGTCTTCCAATATTCATGGAGGCGATCAAGAAACGTGA AATGGGAACACGTATGTATCTGGTCCATCTGGTCCTGAAAATTACCATGT CCATGGTGGTGGCTAGGAAGTATTGCTTTCGTGATCCAAACTTTTTCCAG TATCTTGCTAACATGCTGACACCAGTTGATCCTTGTAAAAACCGCGACCC AAATCAATTGCGTGCCGACACCTGTCATTTGTTGTATGTATCGTTAATGG GTTGTGGTCGTGAGTATTTCATCAAAGTCTCCCGCACTAAAGCTTTTGAG CATCTCATCGATATTCTACAGTTGGTACCTGATAATCACAGTGATGCCCA GAGTGCTGAAGATGCTTTCGGCTGTCTCACATTGTTCACTGATGAATGGG ACTTGTTTATTCACAAATTCTCCAAAGCCCCAATCAATAAACTAATCGAA GAATGGCGTCGTTATGGGCTCGAGTATGCTGGTGGTCTTCCAAACTTCAT CTACACGCTGGAAAACCTTAAAAAGAGGTTGTACTGTATTATTCATGCTT ATCGAATGAATAAAATGACATTCAGGCTAGATAAAACATTCAATGCTGAA GCACTGCAAGAACACAGTCTAGTTGGTTGCTCTAACCCGAAATGCTACAA GTTAAATTACACAACCCTGGGTGAGTATAAATACAAGAAATGCTCAAAGT GTCATTTAGCTTATTATTGCACCAAAGCTTGCCAACTCACGCACTGGAAA ACACATAAGAAATATTGCGTTAAACCTATTTGGGAGACGGAGAAAGAAAA GCAATGTGACGTTAATAGCAATGAAATTCCATCTATAGTACAACCGCCAA AGCCGCCAAAAACAACAAGAAACTTTAACCCTAGCAATGAATCTAAGCTC AAATGTAGTATCACTGCTGATATGGTTTCTAAGCTAGCCTCAAGTCAAGG AAGAATGACCCAACGGCTGTGAGTGGAGGCGCCAAGAAAAAGACCAAACA AAAGCAACAGGACGAGCCTAAGTCAAAAGCTGAAGAAGAAGAAGAGGAAG AGGAAGAAGGGAGCAGTTCTGCCAAGATGAACCCTACAGAACAAACAGAG CTGAAATTAACACTATCAAAAGGCTTGAATCCCTTAGGAAGTGACCAATC AGCTCGCCCCATTCGTAACCGTGCTGATCGAAAGGTGCAAGTGGTTAAAG AAACTGATGAAGGAACATTGATTAAATTCCGTGGTAAATATATCACCTTA GCCAGAGAATACGAATTTGAAGAGCAGCTAGATTATGATTATGGCAGAAA TAAGTTTCACCTTGATCGTCTTAATAAAGATATGATTAAAGTATGTGAAT CGGTTGTCGATTTTCTTGATGTTGATATGGAGGCACAGAGACAAGGTCTT TTTGACAACCTAACCAATATGTGGAATGAATGTCAAACAAGTTTAGTACC ATCTGATGAGCAAACCCAGAAAATGGAAACCATTGCTGAACTTGTCAGGA ATCTGGGTATGGCTAAAGAGGATCATAGCTCTTTTAGACGTGGTAATAAA GATTGTTTGGAACTTCAACGTGTTCGTGATGAACGTAACCGGATCTGTAT GGATCACTTTCTGAAATCGATCTGGCGACTTTTTGTTGAAGACGATGCTG ATATCGATGATGGTGATCGTTTCTCAGAGGAAGATGTTGAATCAGCATTC TTGGTTAATGAACGAGATCGGGTTATGCTTATCCCGACATGTGATTGTCA TGGTCCTTGTCCATGTTGTTGCTCCGGCTGTTATGACTATCGACATTTGA ATATCACTCACAATGCAGAAGAAAGTAAACGTGGATTTTATGAGAAACCA CGACATCCTAACGATAACCGATCACGATTGAAGCATGTGTTGAAGAAAGA TAAATCGGCGACATCTACTGATGAACAAGGACGACCGAAAATTGAGGAGC TGTCAGATAGTGAGGAGGAGGTTGAAGAGGATCTTAAACTAGCTGCAAAG AAACGAAGAGTTTTCTACCGGTTTGAAGATGTTGACCAGGAATGGTTTGA TGAATGTTCTCATTGTTGTTGCCAATGTGATCTCCAGAAAATTGAGATGC TCCAAAACAAGATTAAACCTGAACAACCAACACCGGAAACCTTTGAATCC TTTGCTATTGGATTTTGTGAGAAATTAGCAAGCTGTGATAATTTGAAATA TCACAAATCGATTTTCAAGGAAGCTGCTTTCATCTCAAGCGCTGGTTCTG ACCATATGCTTCGACAGAAAATCCTTGAGATTTGTCTTCCAATATTCATG GAGGCGATCAAGAAACGTGAAATGGGAACACGTATGTATCTGGTCCATCT GGTCCTGAAAATTACCATGTCCATGGTGGTGGCTAGGAAGTATTGCTTTC GTGATCCAAACTTTTTCCAGTATCTTGCTAACATGCTGACACCAGTTGAT CCTTGTAAAAACCGCGACCCAAATCAATTGCGTGCCGACACCTGTCATTT GTTGTATGTATCGTTAATGGGTTGTGGTCGTGAGTATTTCATCAAAGTCT CCCGCACTAAAGCTTTTGAGCATCTCATCGATATTCTACAGTTGGTACCT GATAATCACAGTGATGCCCAGAGTGCTGAAGATGCTTTCGGCTGTCTCAC ATTGTTCACTGATGAATGGGACTTGTTTATTCACAAATTCTCCAAAGCCC CAATCAATAAACTAATCGAAGAATGGCGTCGTTATGGGCTCGAGTATGCT GGTGGTCTTCCAAACTTCATCTACACGCTGGAAAACCTTAAAAAGAGGTT GTACTGTATTATTCATGCTTATCGAATGAATAAAATGACATTCAGGCTAG ATAAAACATTCAATGCTGAAGCACTGCAAGAACACAGTCTAGTTGGTTGC TCTAACCCGAAATGCTACAAGTTAAATTACACAACCCTGGGTGAGTATAA ATACAAGAAATGCTCAAAGTGTCATTTAGCTTATTATTGCACCAAAGCTT GCCAACTCACGCACTGGAAAACACATAAGAAATATTGCGTTAAACCTATT TGGGAGACGGAGAAAGAAAAGCAATGTGACGTTAATAGCAATGAAATTCC ATCTATAGTACAACCGCCAAAGCCGCCAAAAACAACAAGAAACTTTAACC CTAGCAATGAATCTAAGCTCAAATGTAGTATCACTGCTGATATGGTTTCT AAGCTAGCCTCAAGTCAAGGAAGAATGACCCAACGGCTGTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
| sc0000250_pilon | genome | sc0000250_pilon:172096..176550 - |
Properties
| Property Name | Value |
| Aaloc | 586-2793:2209 |
| Aaloc | 529-585:2269 |
| Aaloc | 349-525:3205 |
| Aaloc | 1-345:4456 |
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