|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000089_pilon:310419..311998- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_044193 ID=XLOC_044193|Name=XLOC_044193|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1580bp|location=Sequence derived from alignment at sc0000089_pilon:310419..311998- (Clytia hemisphaerica_ch_hm2_pilon)
AAAAGAAATTCATACATTTCTATTTCTTTCATATTCAGAGAAGAAAAGAA
GAGACAAAATTTTCACTTCATACTTATTTCTGTATTTTTTTATTTTCAGA
GGAAAATCGAAAGGAAATGGCGTGGTATAATATCAGTAGAAGCATGATTC
CTTGTAAACTTGCGTATTTTTTGTTGATCGCAAAAGAGTTTGCAATTCGC
ATGAACTTAGTATTGTTTCTATTGAGCATCGGTTTATCGAAAAGTCAAGC
TGGATTAATTGTTGGCTTACGGTTGGTCAGCGTTATCGGGTTTTCTCCAT
TCATTGGAATGATATCGGATAAATATCGGATTCATCGACTGACGATTGTG
CTTTGTTCCGTTATCGTATTCATATTCAACGCCATGCAGCCTGTCCTTGC
GTTGAAGTTTGGTTCCAAAACATTTCTGTATTGCTCAGCTGGAAGTGAGG
AGAACCGAAACTCGACCACAACATCAAACCTGAATACTACCTCGCCATTC
AGTACAGAATCTCCCACTAGTACCAGTCCCCCTGACCAGCAAGTTTTGTT
TTGGGTGATGATTGCTGTCAATTTAATCCAATCGCTATTCGATGGCTCCT
TAGATGCTTTTATAGATACTGGAGTTATGTTACGAATCAAACAATCCAAC
GAAAATGGCGAGAAAAATAAGTATGGACCTCAACGCATCTTTGGTGTTCT
TGGTCACATGGTTGGTCCAATATTGGGGAATTATTCGATCGCATTGTTCC
CGAGTGATCACGTGACTTGTTATACCGGTGTGTTCATTTTGTACGGATTT
CTTTCCGTTTGTTATATGCTAACCTTGCTTTGGGTGTTTCATGGACTGAA
GATGGATGTTCACGATTTGAAGGAAAGCGAAGAAGAAGCACCACTTGAGG
AGAAAGGAGAAAAAGAAAAGCTTGAACAACAACCATTCCGGACAGTTTTA
TTTCGGACACTTCTTGAGGAGGAGATGTTAGTCATGGTATTGACGTTATT
TGGTATCGGTTGTTTGATGTCGGAAATTGTTTATTACAGTTTTCCATACC
TTAAAGATCTGAACGCGACTACCATGGACTTGAACTTGTACCTTATTATT
TATACTGTTGGAAACTTTATCGGTTTTCTGATCATCCCAAAGCTGGTGCG
TCTCGTGAAAGGTTCATTTCCCACCATATTTATATTACTGATTGTGTTAG
TGTTGAGGTTCAGCCTGGTGGCTGCTTTCAATGACCCGAAGTTAATCAGT
GTTGTTCAAATTCTCTCGATGTTCGATTATCCAATCACAGAGACGGTCGG
TTTGGAGTTTGTTTTAAGGAAATCTCCGAAACGTGTTCTTACAAGTATGT
ATGGAATCATCAATGCTGTTCAATATTCACTTCCCGAATGTGTGGGCAAC
ACCCTAGGTGGATATATTTATGAAAAATTTGGTGCTAAAGTGTTGTTTTA
TGGTTGCTCAGTGGTCGCTGCTACACTCTCCCTCGCCCTTGTCTTATGGA
TTGTCAAAAAACAGATTCAAGAGACCAAACAAGTTCGAGAAAAAAATGGA
CAAGAATTAACGCTTGTTGAAAAATCGTAG Coding sequence (CDS) from alignment at sc0000089_pilon:310419..311998- >XLOC_044193 ID=XLOC_044193|Name=XLOC_044193|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3160bp|location=Sequence derived from alignment at sc0000089_pilon:310419..311998- (Clytia hemisphaerica_ch_hm2_pilon)
AAAAGAAATTCATACATTTCTATTTCTTTCATATTCAGAGAAGAAAAGAA
GAGACAAAATTTTCACTTCATACTTATTTCTGTATTTTTTTATTTTCAGA
GGAAAATCGAAAGGAAATGGCGTGGTATAATATCAGTAGAAGCATGATTC
CTTGTAAACTTGCGTATTTTTTGTTGATCGCAAAAGAGTTTGCAATTCGC
ATGAACTTAGTATTGTTTCTATTGAGCATCGGTTTATCGAAAAGTCAAGC
TGGATTAATTGTTGGCTTACGGTTGGTCAGCGTTATCGGGTTTTCTCCAT
TCATTGGAATGATATCGGATAAATATCGGATTCATCGACTGACGATTGTG
CTTTGTTCCGTTATCGTATTCATATTCAACGCCATGCAGCCTGTCCTTGC
GTTGAAGTTTGGTTCCAAAACATTTCTGTATTGCTCAGCTGGAAGTGAGG
AGAACCGAAACTCGACCACAACATCAAACCTGAATACTACCTCGCCATTC
AGTACAGAATCTCCCACTAGTACCAGTCCCCCTGACCAGCAAGTTTTGTT
TTGGGTGATGATTGCTGTCAATTTAATCCAATCGCTATTCGATGGCTCCT
TAGATGCTTTTATAGATACTGGAGTTATGTTACGAATCAAACAATCCAAC
GAAAATGGCGAGAAAAATAAGTATGGACCTCAACGCATCTTTGGTGTTCT
TGGTCACATGGTTGGTCCAATATTGGGGAATTATTCGATCGCATTGTTCC
CGAGTGATCACGTGACTTGTTATACCGGTGTGTTCATTTTGTACGGATTT
CTTTCCGTTTGTTATATGCTAACCTTGCTTTGGGTGTTTCATGGACTGAA
GATGGATGTTCACGATTTGAAGGAAAGCGAAGAAGAAGCACCACTTGAGG
AGAAAGGAGAAAAAGAAAAGCTTGAACAACAACCATTCCGGACAGTTTTA
TTTCGGACACTTCTTGAGGAGGAGATGTTAGTCATGGTATTGACGTTATT
TGGTATCGGTTGTTTGATGTCGGAAATTGTTTATTACAGTTTTCCATACC
TTAAAGATCTGAACGCGACTACCATGGACTTGAACTTGTACCTTATTATT
TATACTGTTGGAAACTTTATCGGTTTTCTGATCATCCCAAAGCTGGTGCG
TCTCGTGAAAGGTTCATTTCCCACCATATTTATATTACTGATTGTGTTAG
TGTTGAGGTTCAGCCTGGTGGCTGCTTTCAATGACCCGAAGTTAATCAGT
GTTGTTCAAATTCTCTCGATGTTCGATTATCCAATCACAGAGACGGTCGG
TTTGGAGTTTGTTTTAAGGAAATCTCCGAAACGTGTTCTTACAAGTATGT
ATGGAATCATCAATGCTGTTCAATATTCACTTCCCGAATGTGTGGGCAAC
ACCCTAGGTGGATATATTTATGAAAAATTTGGTGCTAAAGTGTTGTTTTA
TGGTTGCTCAGTGGTCGCTGCTACACTCTCCCTCGCCCTTGTCTTATGGA
TTGTCAAAAAACAGATTCAAGAGACCAAACAAGTTCGAGAAAAAAATGGA
CAAGAATTAACGCTTGTTGAAAAATCGTAGAAAAGAAATTCATACATTTC
TATTTCTTTCATATTCAGAGAAGAAAAGAAGAGACAAAATTTTCACTTCA
TACTTATTTCTGTATTTTTTTATTTTCAGAGGAAAATCGAAAGGAAATGG
CGTGGTATAATATCAGTAGAAGCATGATTCCTTGTAAACTTGCGTATTTT
TTGTTGATCGCAAAAGAGTTTGCAATTCGCATGAACTTAGTATTGTTTCT
ATTGAGCATCGGTTTATCGAAAAGTCAAGCTGGATTAATTGTTGGCTTAC
GGTTGGTCAGCGTTATCGGGTTTTCTCCATTCATTGGAATGATATCGGAT
AAATATCGGATTCATCGACTGACGATTGTGCTTTGTTCCGTTATCGTATT
CATATTCAACGCCATGCAGCCTGTCCTTGCGTTGAAGTTTGGTTCCAAAA
CATTTCTGTATTGCTCAGCTGGAAGTGAGGAGAACCGAAACTCGACCACA
ACATCAAACCTGAATACTACCTCGCCATTCAGTACAGAATCTCCCACTAG
TACCAGTCCCCCTGACCAGCAAGTTTTGTTTTGGGTGATGATTGCTGTCA
ATTTAATCCAATCGCTATTCGATGGCTCCTTAGATGCTTTTATAGATACT
GGAGTTATGTTACGAATCAAACAATCCAACGAAAATGGCGAGAAAAATAA
GTATGGACCTCAACGCATCTTTGGTGTTCTTGGTCACATGGTTGGTCCAA
TATTGGGGAATTATTCGATCGCATTGTTCCCGAGTGATCACGTGACTTGT
TATACCGGTGTGTTCATTTTGTACGGATTTCTTTCCGTTTGTTATATGCT
AACCTTGCTTTGGGTGTTTCATGGACTGAAGATGGATGTTCACGATTTGA
AGGAAAGCGAAGAAGAAGCACCACTTGAGGAGAAAGGAGAAAAAGAAAAG
CTTGAACAACAACCATTCCGGACAGTTTTATTTCGGACACTTCTTGAGGA
GGAGATGTTAGTCATGGTATTGACGTTATTTGGTATCGGTTGTTTGATGT
CGGAAATTGTTTATTACAGTTTTCCATACCTTAAAGATCTGAACGCGACT
ACCATGGACTTGAACTTGTACCTTATTATTTATACTGTTGGAAACTTTAT
CGGTTTTCTGATCATCCCAAAGCTGGTGCGTCTCGTGAAAGGTTCATTTC
CCACCATATTTATATTACTGATTGTGTTAGTGTTGAGGTTCAGCCTGGTG
GCTGCTTTCAATGACCCGAAGTTAATCAGTGTTGTTCAAATTCTCTCGAT
GTTCGATTATCCAATCACAGAGACGGTCGGTTTGGAGTTTGTTTTAAGGA
AATCTCCGAAACGTGTTCTTACAAGTATGTATGGAATCATCAATGCTGTT
CAATATTCACTTCCCGAATGTGTGGGCAACACCCTAGGTGGATATATTTA
TGAAAAATTTGGTGCTAAAGTGTTGTTTTATGGTTGCTCAGTGGTCGCTG
CTACACTCTCCCTCGCCCTTGTCTTATGGATTGTCAAAAAACAGATTCAA
GAGACCAAACAAGTTCGAGAAAAAAATGGACAAGAATTAACGCTTGTTGA
AAAATCGTAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000089_pilon | genome | sc0000089_pilon:310419..311998 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 85-1581:1498 |
| Aaloc | 1-81:1581 |
|
