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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000107_pilon:796803..799145- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_044160 ID=XLOC_044160|Name=XLOC_044160|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2343bp|location=Sequence derived from alignment at sc0000107_pilon:796803..799145- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTCGCTTTTTTCAGCTGGTCCAAATATTGAAGTTATCAAAACTACTGG
TCAAAAATTAAAGATTTCTACTTCCAGTAGACTTGGTCACATTATAGATG
GAAAAGGAGAGTTGGTGTTAATGCGATCCAAAAATGGAAATAGTTTTAGC
CTCAACATAAAAAATGATACTGGTACGAAAAAAGATTCTTTCAAATTCAA
TTATCCCAAGGATTCTGTGAAATGCAGTTTCAGAGAAAACCAACTTTGTT
TCACCTATACCATTAAAACCACAAACATCAAGACTGGAATCATAAGTGGT
GAAATTTTGGATCTTAAATCGTTCAAGGAATTTAATTCGTTGATGAAACA
GATGGAAACAAAACGATTCAAACCGATTGAAATTGTTTCTTCAGGAAGTA
ATATTAATGCAACAAAACCAAGTATTCAATCCCTTAGCCAAAAGAACAGA
AGTTTTGAATACTGTTCCAATACTGAGACTGAAACAGGATCGTTTAAGAC
GGAGCAAAATGCGATAACTCCTAAGCGCGAGAGTGACAACATGAATTCAA
AAGAGAACACACCTAAATCAATACCTAAGAGGATGGCAATGAAGATGAAA
GGGGGAGAAGATAACAGGAAACCTCTGGATACTTTGAAAACCAAACAGTT
CTACAGTAAAGACACCAATACACCGAAGAGGGAAGTTAAATCAAACTTTC
CTGTTTATTCACAAAGTAAATTCAACAAGATTCCCAAATTTATTAAAAAC
AGGCTACCTTCTCCAATTCCTTTTCGTAAGAACAAAGAGAAAATTACAAG
GGAATCAAATGAAAGTATTGAAGACTTTTTTGAAGATGATAATTCACTTA
TTGGATTTGCTAATTTGGGAAATACGTGTTACATGAATGCAATACTCCAA
TGCCTATTAAACATACCAAATTTCTATCAAGAACTACACAATCAAAACAA
TCTTGCTGTCTTACCAAAAGAAAGTCTTTATAAACGTCTTTGTCAGCTTG
GTTTTGCTAAACATAATCTTCAAGGATCAGAAACACAGAAACAACATTTA
CAACTAGTGAAAGAATCAATCTCTTCTGCTGCCAATCGGTTTTCTGGTTA
CTCGCAACATGATGCTCATGAATTCCTTTGTCAATGCATGGATCAATTGA
AGGAAGACTTGTTAACTCAAATGACAAAGAAAAAAGAAGAAATGCAATTG
TCTATTGAAGAATTGAAATCAGTTTTTGTTTGTCCGATTAAAGAGAACTT
GGAGACCACAGTAACACACTCTATTAGATGTCTTGGTTGTAAAGAGAAAG
TTATTAAAGATGAAGAGTACCACGACTTTTCTCTTGTTATTCCAGAATAT
GATGAGAATTTTAACCCTGGTACACTAAGTATTGAAAAATTACTGAATCT
TTATTTTGCTGATGAAGAAATCGAGTACACATGTGAAAAATGTCAAAACA
GTAGTTCAGTGTTAACCCACCAAATGAAAAAGCTTCCACGTATCCTTGTC
TTACATTTAAAGAGGTATGACAGTTATGAGATGAAGAAATCAGATTCCAT
CAAAATTCCTAAAATCATGGACATCTCAAAAGTTGTCTCTGATGAAGTTG
CTTTTCCATCCGATTTCAATCTTGATTGCTCTTTGTGGAAAGATTCTACT
ACCCTCAAAAGTGGAGTCAAACGTAAATCTGAAGACTCGAGTTTTCTTTC
TAATGCACCACTAAATAAGACACCAAAAGTCAACAGAAATTCTTACATCA
ATGAAATGAGTGCTGCAGAAATACTTGCTATCAGTGCTAGAGAAAGTCGT
AAAGAGGAAAGTAATTCGTCGTACAGCAATCCATCTCACAGCTTCACAAA
GATTCAAGGACCACGTAAAACCTTGACTTTTACCTCAGACAGTGAGTTTG
ATTCAAATATGGAGGTCAAAACTGAGCCAAAACTATCGCCAGAAGAGCAG
CAGATCAAAGAAGCAATGGAATTAAGTATACAGGAATACAAATCACAACA
GAGACTTGATATGAGTACTTTTTCACTGTCCAAACAAACCAGTACTCCTT
CATCAATTAAAACTGAACCTTTCTTCCAAGTTTTATCCTCAGATAGTGAT
GCTATAACAGATGAGAAGCAAACCTATCGTTTAGTGGGTGTTGTCAATCA
CCATGGTATGAACACGGCTAGTGGTCACTACACCTGTGATTGTTATGATT
TCAAATCCAAACAATGGCGTAATTACAATGATTCGTCTGTCAAAGAAATG
GATGAGTATGATTGGAACAGGAGATCTTCAAGTGCGTACATTGTCTTTTA
TATGCACGACAAATGTTATCAATCCATTCAAAATAAATACTAA Coding sequence (CDS) from alignment at sc0000107_pilon:796803..799145- >XLOC_044160 ID=XLOC_044160|Name=XLOC_044160|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=4686bp|location=Sequence derived from alignment at sc0000107_pilon:796803..799145- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTCGCTTTTTTCAGCTGGTCCAAATATTGAAGTTATCAAAACTACTGG
TCAAAAATTAAAGATTTCTACTTCCAGTAGACTTGGTCACATTATAGATG
GAAAAGGAGAGTTGGTGTTAATGCGATCCAAAAATGGAAATAGTTTTAGC
CTCAACATAAAAAATGATACTGGTACGAAAAAAGATTCTTTCAAATTCAA
TTATCCCAAGGATTCTGTGAAATGCAGTTTCAGAGAAAACCAACTTTGTT
TCACCTATACCATTAAAACCACAAACATCAAGACTGGAATCATAAGTGGT
GAAATTTTGGATCTTAAATCGTTCAAGGAATTTAATTCGTTGATGAAACA
GATGGAAACAAAACGATTCAAACCGATTGAAATTGTTTCTTCAGGAAGTA
ATATTAATGCAACAAAACCAAGTATTCAATCCCTTAGCCAAAAGAACAGA
AGTTTTGAATACTGTTCCAATACTGAGACTGAAACAGGATCGTTTAAGAC
GGAGCAAAATGCGATAACTCCTAAGCGCGAGAGTGACAACATGAATTCAA
AAGAGAACACACCTAAATCAATACCTAAGAGGATGGCAATGAAGATGAAA
GGGGGAGAAGATAACAGGAAACCTCTGGATACTTTGAAAACCAAACAGTT
CTACAGTAAAGACACCAATACACCGAAGAGGGAAGTTAAATCAAACTTTC
CTGTTTATTCACAAAGTAAATTCAACAAGATTCCCAAATTTATTAAAAAC
AGGCTACCTTCTCCAATTCCTTTTCGTAAGAACAAAGAGAAAATTACAAG
GGAATCAAATGAAAGTATTGAAGACTTTTTTGAAGATGATAATTCACTTA
TTGGATTTGCTAATTTGGGAAATACGTGTTACATGAATGCAATACTCCAA
TGCCTATTAAACATACCAAATTTCTATCAAGAACTACACAATCAAAACAA
TCTTGCTGTCTTACCAAAAGAAAGTCTTTATAAACGTCTTTGTCAGCTTG
GTTTTGCTAAACATAATCTTCAAGGATCAGAAACACAGAAACAACATTTA
CAACTAGTGAAAGAATCAATCTCTTCTGCTGCCAATCGGTTTTCTGGTTA
CTCGCAACATGATGCTCATGAATTCCTTTGTCAATGCATGGATCAATTGA
AGGAAGACTTGTTAACTCAAATGACAAAGAAAAAAGAAGAAATGCAATTG
TCTATTGAAGAATTGAAATCAGTTTTTGTTTGTCCGATTAAAGAGAACTT
GGAGACCACAGTAACACACTCTATTAGATGTCTTGGTTGTAAAGAGAAAG
TTATTAAAGATGAAGAGTACCACGACTTTTCTCTTGTTATTCCAGAATAT
GATGAGAATTTTAACCCTGGTACACTAAGTATTGAAAAATTACTGAATCT
TTATTTTGCTGATGAAGAAATCGAGTACACATGTGAAAAATGTCAAAACA
GTAGTTCAGTGTTAACCCACCAAATGAAAAAGCTTCCACGTATCCTTGTC
TTACATTTAAAGAGGTATGACAGTTATGAGATGAAGAAATCAGATTCCAT
CAAAATTCCTAAAATCATGGACATCTCAAAAGTTGTCTCTGATGAAGTTG
CTTTTCCATCCGATTTCAATCTTGATTGCTCTTTGTGGAAAGATTCTACT
ACCCTCAAAAGTGGAGTCAAACGTAAATCTGAAGACTCGAGTTTTCTTTC
TAATGCACCACTAAATAAGACACCAAAAGTCAACAGAAATTCTTACATCA
ATGAAATGAGTGCTGCAGAAATACTTGCTATCAGTGCTAGAGAAAGTCGT
AAAGAGGAAAGTAATTCGTCGTACAGCAATCCATCTCACAGCTTCACAAA
GATTCAAGGACCACGTAAAACCTTGACTTTTACCTCAGACAGTGAGTTTG
ATTCAAATATGGAGGTCAAAACTGAGCCAAAACTATCGCCAGAAGAGCAG
CAGATCAAAGAAGCAATGGAATTAAGTATACAGGAATACAAATCACAACA
GAGACTTGATATGAGTACTTTTTCACTGTCCAAACAAACCAGTACTCCTT
CATCAATTAAAACTGAACCTTTCTTCCAAGTTTTATCCTCAGATAGTGAT
GCTATAACAGATGAGAAGCAAACCTATCGTTTAGTGGGTGTTGTCAATCA
CCATGGTATGAACACGGCTAGTGGTCACTACACCTGTGATTGTTATGATT
TCAAATCCAAACAATGGCGTAATTACAATGATTCGTCTGTCAAAGAAATG
GATGAGTATGATTGGAACAGGAGATCTTCAAGTGCGTACATTGTCTTTTA
TATGCACGACAAATGTTATCAATCCATTCAAAATAAATACTAAATGTCGC
TTTTTTCAGCTGGTCCAAATATTGAAGTTATCAAAACTACTGGTCAAAAA
TTAAAGATTTCTACTTCCAGTAGACTTGGTCACATTATAGATGGAAAAGG
AGAGTTGGTGTTAATGCGATCCAAAAATGGAAATAGTTTTAGCCTCAACA
TAAAAAATGATACTGGTACGAAAAAAGATTCTTTCAAATTCAATTATCCC
AAGGATTCTGTGAAATGCAGTTTCAGAGAAAACCAACTTTGTTTCACCTA
TACCATTAAAACCACAAACATCAAGACTGGAATCATAAGTGGTGAAATTT
TGGATCTTAAATCGTTCAAGGAATTTAATTCGTTGATGAAACAGATGGAA
ACAAAACGATTCAAACCGATTGAAATTGTTTCTTCAGGAAGTAATATTAA
TGCAACAAAACCAAGTATTCAATCCCTTAGCCAAAAGAACAGAAGTTTTG
AATACTGTTCCAATACTGAGACTGAAACAGGATCGTTTAAGACGGAGCAA
AATGCGATAACTCCTAAGCGCGAGAGTGACAACATGAATTCAAAAGAGAA
CACACCTAAATCAATACCTAAGAGGATGGCAATGAAGATGAAAGGGGGAG
AAGATAACAGGAAACCTCTGGATACTTTGAAAACCAAACAGTTCTACAGT
AAAGACACCAATACACCGAAGAGGGAAGTTAAATCAAACTTTCCTGTTTA
TTCACAAAGTAAATTCAACAAGATTCCCAAATTTATTAAAAACAGGCTAC
CTTCTCCAATTCCTTTTCGTAAGAACAAAGAGAAAATTACAAGGGAATCA
AATGAAAGTATTGAAGACTTTTTTGAAGATGATAATTCACTTATTGGATT
TGCTAATTTGGGAAATACGTGTTACATGAATGCAATACTCCAATGCCTAT
TAAACATACCAAATTTCTATCAAGAACTACACAATCAAAACAATCTTGCT
GTCTTACCAAAAGAAAGTCTTTATAAACGTCTTTGTCAGCTTGGTTTTGC
TAAACATAATCTTCAAGGATCAGAAACACAGAAACAACATTTACAACTAG
TGAAAGAATCAATCTCTTCTGCTGCCAATCGGTTTTCTGGTTACTCGCAA
CATGATGCTCATGAATTCCTTTGTCAATGCATGGATCAATTGAAGGAAGA
CTTGTTAACTCAAATGACAAAGAAAAAAGAAGAAATGCAATTGTCTATTG
AAGAATTGAAATCAGTTTTTGTTTGTCCGATTAAAGAGAACTTGGAGACC
ACAGTAACACACTCTATTAGATGTCTTGGTTGTAAAGAGAAAGTTATTAA
AGATGAAGAGTACCACGACTTTTCTCTTGTTATTCCAGAATATGATGAGA
ATTTTAACCCTGGTACACTAAGTATTGAAAAATTACTGAATCTTTATTTT
GCTGATGAAGAAATCGAGTACACATGTGAAAAATGTCAAAACAGTAGTTC
AGTGTTAACCCACCAAATGAAAAAGCTTCCACGTATCCTTGTCTTACATT
TAAAGAGGTATGACAGTTATGAGATGAAGAAATCAGATTCCATCAAAATT
CCTAAAATCATGGACATCTCAAAAGTTGTCTCTGATGAAGTTGCTTTTCC
ATCCGATTTCAATCTTGATTGCTCTTTGTGGAAAGATTCTACTACCCTCA
AAAGTGGAGTCAAACGTAAATCTGAAGACTCGAGTTTTCTTTCTAATGCA
CCACTAAATAAGACACCAAAAGTCAACAGAAATTCTTACATCAATGAAAT
GAGTGCTGCAGAAATACTTGCTATCAGTGCTAGAGAAAGTCGTAAAGAGG
AAAGTAATTCGTCGTACAGCAATCCATCTCACAGCTTCACAAAGATTCAA
GGACCACGTAAAACCTTGACTTTTACCTCAGACAGTGAGTTTGATTCAAA
TATGGAGGTCAAAACTGAGCCAAAACTATCGCCAGAAGAGCAGCAGATCA
AAGAAGCAATGGAATTAAGTATACAGGAATACAAATCACAACAGAGACTT
GATATGAGTACTTTTTCACTGTCCAAACAAACCAGTACTCCTTCATCAAT
TAAAACTGAACCTTTCTTCCAAGTTTTATCCTCAGATAGTGATGCTATAA
CAGATGAGAAGCAAACCTATCGTTTAGTGGGTGTTGTCAATCACCATGGT
ATGAACACGGCTAGTGGTCACTACACCTGTGATTGTTATGATTTCAAATC
CAAACAATGGCGTAATTACAATGATTCGTCTGTCAAAGAAATGGATGAGT
ATGATTGGAACAGGAGATCTTCAAGTGCGTACATTGTCTTTTATATGCAC
GACAAATGTTATCAATCCATTCAAAATAAATACTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000107_pilon | genome | sc0000107_pilon:796803..799145 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1-2343:2344 |
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