|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000089_pilon:508620..514649+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_044130 ID=XLOC_044130|Name=XLOC_044130|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=6030bp|location=Sequence derived from alignment at sc0000089_pilon:508620..514649+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCAGGTAGAAGACTGAGGCAATTTTTTACTGGtaagtttatttattt
aatgggtcaatgggctattccaaaaaaagatTACACTGCAACCAGGGGAG
GGGGTAcgtatagacctttttgccatattgaattgtatgcaaaaattatg
gtgtcCGAATTGCTGTGGTGAGATTGtattgaaaatatgcaaaacctatg
caaaaagaaagtattaatataaaacttacgtGCATAATCTGCATTTGAAG
TGTAATCTtgttgtagaagaaagattaaatagaccttttttcaaagagac
caccctgttgaataattatgtagtccagcagaaaaacaatgatacagcca
tgcataattactgtatcatgcatattgtaataattaatGCATGGTTGTAT
CATTGTtcttctgctggactacataattatttaaCAGGGtagcctctttg
aaaaaaggtctatttacttctcttgaaaactaaaaaaaattatattcgct
catctcttagaacaaccACGACCCTGGATACCGCCTTACATTGTATATAC
CGtaagatcaggtaacttgcatcagtggagactAACATGcttagccctca
aatgaaagacctggctggtcattaaaatacaaaaataaatcaaatcaaaa
atatggtggagtagagctgcaagcggagctgtgtagttgtattttaatga
ccagccaggtcattcatttgagggctatgcatgttaacctccactgatgc
aagttaccggATCTCACGGTACGATGTGCCCGGTGGGTGTTTTTTAATAA
TAATGTAATATGTTTTAGGTTAGAATGCTAAAACACCATACATTTTCCCG
CTGTACATGTACGGACCGCTTTCGGACTGCTCGTAAAAACGTGTGTCCCT
GGTCAACTGCAGTCTTTACTTCATAGGTCGGGCGGGGACGAATCTTGAAA
GAGGGcggacagtcaggcacatcctggcaaatgaacggggtatttttcac
ttgcgaacattggcaaatgaacggggtcgaaaacgaaagtgacgtaatag
cgccgaatacctaGTTTAATTGAACAGGGTTGgaattattttgcttcatt
tcaaagaactttttttccattggtcaattttgtcttcgaagattgaagaa
acttttaatgaaaaaataaagttcccagttttcttccttttttccctttt
tcagtttgaagttcatttttattcattttcacgcttttagcctgagacgt
cctatctcatttacactgggtggtGGGTGACgaaataccccatgcaaatg
ctcaccctgttcatttgccaggatgtgcctgactggtGGAAGTGTTATAT
GGCGTCATATGAGTCAAAGACGTCCTCGTCCCAGCTCACTCTTACACTTT
GATATTTGAGTCTACACCTACTTTTGTGCTTTACACATTTACCAGCGTCT
TAGAACATCTTGCGCttatgtttttaactttttattttattttatccttt
atgtttaaaatcacgaaaatttacgtaatgtattatgtgataattcaata
gaactagaactagaggCGGTTACGGATGAGTACGGTGGGAATAAATCTTT
GAGGAATAGCTCCCATCATACATTGTACGGTGAAGCCCCCGTATCTTGTA
CGGTGGTCAAAATAGGTTAACTTGTTCCCACTTTACGCCCACTGGAGAac
accgtacaatgtacggcAGTGTCCAGGGTCATGAACaaacacttcaaaaa
accacaacattagacataaactaaacctgaaaaatcaccagcgaagttaa
aaaaataatccttattcggctgactgtaaattattctcctggggaATAGA
ACCGTCaaatgatcaaataaaaatattgatctgAACCCCCTGATTTACAG
GGGCTTTTACTAATGTCTTGCGCTTGACAGGGGTTTTCTTGCACAGGAAG
ATaaatttccatcaacagatgacatcTTATGAGGATTTCTATATTTTtaa
agggcaaggttctctagaAACTGGCTGAAAGTGtctttttcggaaaaaaa
attttggttgtagaaatcagattttctttttggggaaattccctgttttg
tcatttttcaagcttcatcattcatgtttttcaAGCTTATGTATCTAATG
CTATGCCTGttatcttttctctttttttcgaACATCATCTTTATTCAGCA
TGTTTCTTCATTACTATCTATCTCAGGAAGGTctattcagcatgttgctt
gttcatTTTATAACATTTTACACCTGTTCCATATTCTCCCTAAGGGTGTC
CTGTAATTATCCCAAATGTTCTGAGTCTTTATGCAGGACACCTTTGagat
gaattttaaaacaataaacTAAATTTCTTGAATGTTTAATGAccatattt
tggcaaattttaatattaaaaatcgaatttggatGTCTAGGTAGGATAAA
GTAATGTCCAAATAAGTCAAAAACGTCTTGTAGTTGCTCCAGTTGACTTT
ACATATCCTCAGGTTGGTAAGATTTCGTCTCTTAGTAATGTTTCTACTGT
TTGATTTTTTCTCCAGATATACATGAAAGTTTGTGTCAAATAGCACCTCT
TATTATTAGGTCCTTATTCACTTTAAGATAAGATTGTACTGTTGAAagat
tttatataaaatatttgaGTAGGTTCAGCTTATAGAGACTCTAGTGTAAC
CTCTAGAGGGTGGACTTCTCCCAGTGGCTGTAACTtaagaaatgaaaaac
ttttaatgaTTGATCAACTAAAAACTATATTTCTTACTTTCCTACTTCTA
TAATAAGTTCTTGTTACTTATTTCACGAAAACAGTGGCCTGCAAACTGAA
GTTTTCTATTGGTGAGGATACGTGAGATCCTTGGTAGATTATTGCATATT
TGATTGAGGTACTAATATTGCATAGATCAAAAAGAGCCTTGTATGGTTAT
GTATCTCTTCCACTGGAATatgacattaaaataataaatgaATTTACATC
TGTTCATTTAGGGAGAAGGGGCAGTCAAAATGGAGACAGACCTTCCAATG
AAGAGGACGACGCAACTGCTCAAGGTGAGCAACAACTCAGTCAAGTTGAG
CAACAGCTCGGTCAAGTTGGATTAGATGATCAATCATCAAATGATGCTCC
TGGAGCTGTCGGAGGCCCACCTATTGTTCCTGCTGGAGCATCTTCCGGAA
ATGGAGCAGTAGCAGGAGGTTCTGGAGGTGCCATTGGTGGTGACGGAGTC
TACACAACTAGCAAAGAGATGTACGATAATAGTACAGACTACATTGTAGC
ATCTTTAGCAGAGGGAATGGTACCTAATGAGGACCAGAGTGGATTCTCTT
TCCAAATAGAACTAATCAAACGGCTGGAGAGGTTTCTTATCCTTGGTACA
GAGGGAAATACTTACTATGCAAGTGAAAAAGACAGAACATATGAAAACAT
AAGTTGTATAAATGAGCTCTTAGAAAAAGGAGAAGTGGATAAGGTTTTGC
ACATTCTCAAAACATTTAGTGTTCAAGGGAGATGTCCAAAAGAGGAACCA
ATCCTGGTTGCTTTGGTGCAATGTTGTTATTTCCAAAATGCTGAGATCCG
TAAGAAGGCTTATGATTTAGTTACTCCAATTTGTAATATACCAACAAAGC
TGTTTAGATTCATTGAGCTTTGTCAGCAAAACGTCAATCAGGAAAGAACA
GCAAAGAAGCATTTAACAGAACTACCAAAAGAGCTCAAGAAGAATCCTCT
AAAGCAGAATccattaaaaaggaaaaaagaaccgATGGAATCAGAAGAAT
GCATAGAAGAAGCACCTGAttcaaaaaaagccaaaaagcagaagaagaaa
aatagccCTTTCAAATCTTATCACACTGACAAAGCTCGCTCTTCAGGCTG
GGGGCGCATGCGTAGGAGAGGGATATCTAGCTTTTATTGTGATAAGAATA
AAAGTGCTGAACGGTTGCTGTATTTGTTGACAAAGTTTAAAAACCGAAAC
AATTGGAATCATCGGCAAGTTCTTGGTTACGCTCATCCAAAGATATCCAA
AGATGATGAGGAACAAGATGGCAAGAATTTGGTCCTGGCGTACTGCACCA
GAGGCGTGGAAGGTTTTCAGAAGAAGCTAAACGAAATCAAGAGAAGATCA
GCAAATTGTTTGCCACAGAATGTGTCTCGTATTCAAAACTTTGTTCAAAT
TCTTGAACAGGTCAGTAAGCTATCACCAGAAAATGAAGGTGATGAAGAGA
AGCTATTGGAATTTTTACGTGGTTATGGCATTCGTGAAAGTGCTGACGAG
TTTGCAGTTGAAATTGTACTCCCTGGAGTCCCCCTCACTCCACCTCCACC
ATCATCTGgtaaagaaaaagcaaaaaattctAAGCAACCATTCCAAGTTG
TGCGAGAACATATACCAACTGCGTTCCTCAGTTCTGCAAAGGTAAATGTT
AGTTAACAATGATAACACTGATAGacttttattttatcaatttttagaTA
TGCCACAGTTATCATGAtaattaagagattattttagattgtaactttaa
aattaagattaatttaaaattttagattccacctaaaatgataaatattg
aGTGAGTCATTCATTCATCTTTGTTGTTCTCTTAGGTTTGGGAAGCATTG
TTGCAAGACATGCCAATGACAGCTATGCTGCGAAACTTGGGGAAAATGAC
TTCCCTTGGTTTGTTTCAGAAGCCCGAAAACTTGAAAATTGTATTGGACG
CTTTAGGTGATACAAATCGTCTTCAGAAAGCAAGAATTCATCCCATTAAG
GTTGGAGTCAATTTATCTTACCTTTCCACTTTTAGCAGTTGATTACAATC
AAGTCAGCtgattcagttattatttttgtgaccatttttatgATCCTCAT
TGTAAGTTCTTCTTACATTACATCTCTTCGTAATGCTAAACAATATTTCT
TCACTTTCAGCTTTTGATTGGGATGAAAGCGTATGAAAATGGTGCTTCAT
TAAGTATGATGAGTTCTGTCACAAAGACAAACACAACAACATGGGAAGCA
aaccaagaaattttgaaaatcttggatAAAGCCTTCTATAAAAGCTTTAA
GGTAATAagattgttttttctttcaatgcTGATGTTATGGTGTCAGAATG
CTGTGATGtagattgaaattttcaaacatgaaaaGCAAAAACTtcctgaa
attttaaaaatctatatCTGCTATTATAAGTGATATCTGCTAATTTTCTC
CTTTCAGCAACCAGAAACGCAAGATGCATTTAGAACAGGGAAACGGTTTA
TGTTGGCATTGGATGTCAGTGGTTCAATGACATGTGGTGGCTGTAATGGT
TGTGAACAGCTCACCCCCTCCATAGCTGCCACCGCACTCTCTATGGTCAC
ATGGAATATAGAAGAGCACGTGGAAATGGTGGCCTTTGGTGGTCGTTTGG
AGCGATTGGAAGATCATGGTTTACGCAAAGATTTGACCATCAATGATGCT
TGGAGGAAGATGAGTCGGGTACTGATTATCATATTTCAGAGAATATTCTT
TAATTCGTTCCAATCGTCTATTTTACAAGACCTTTCCAACTCTAAAGTAG
AGAAAGAATTCAAGTCTTCTGggctattgaaaaaaaaaactttttggacc
CATCTTTTCTACATTCAACAAATGCTCCAGAAATTTTTTATGTTGTGTTG
TTTAATTGATTCGATAATGTTTTGTTTCAGATCAACTTTGGTTCAACAGA
TTGTGCGTTACCAATGAATTATGCGATAGACCGTAATCTTGATATTGACG
TCTTCATTGTTTACACCGATTCCGACACTAATTCATATAATCATCCTCAC
AAAGCATTGCAAAGATATCGCGAAAAGATGGGTAAACCTAACGCTAAACT
CATCGTGATCGCCTTGACATCCAATGGGTTTTCTATCGCCGATCCTAACG
ACCGCCACATGCTGGATGTTGTTGGCTTTGATCCAGCTGTCCCTGAGATG
ATCTGCAATTTTGTTAACGACAGTTATTGA Coding sequence (CDS) from alignment at sc0000089_pilon:508620..514649+ >XLOC_044130 ID=XLOC_044130|Name=XLOC_044130|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=4662bp|location=Sequence derived from alignment at sc0000089_pilon:508620..514649+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCAGGTAGAAGACTGAGGCAATTTTTTACTGATGGCAGGTAGAAGAC
TGAGGCAATTTTTTACTGGGAGAAGGGGCAGTCAAAATGGAGACAGACCT
TCCAATGAAGAGGACGACGCAACTGCTCAAGGTGAGCAACAACTCAGTCA
AGTTGAGCAACAGCTCGGTCAAGTTGGATTAGATGATCAATCATCAAATG
ATGCTCCTGGAGCTGTCGGAGGCCCACCTATTGTTCCTGCTGGAGCATCT
TCCGGAAATGGAGCAGTAGCAGGAGGTTCTGGAGGTGCCATTGGTGGTGA
CGGAGTCTACACAACTAGCAAAGAGATGTACGATAATAGTACAGACTACA
TTGTAGCATCTTTAGCAGAGGGAATGGTACCTAATGAGGACCAGAGTGGA
TTCTCTTTCCAAATAGAACTAATCAAACGGCTGGAGAGGTTTCTTATCCT
TGGTACAGAGGGAAATACTTACTATGCAAGTGAAAAAGACAGAACATATG
AAAACATAAGTTGTATAAATGAGCTCTTAGAAAAAGGAGAAGTGGATAAG
GTTTTGCACATTCTCAAAACATTTAGTGTTCAAGGGAGATGTCCAAAAGA
GGAACCAATCCTGGTTGCTTTGGTGCAATGTTGTTATTTCCAAAATGCTG
AGATCCGTAAGAAGGCTTATGATTTAGTTACTCCAATTTGTAATATACCA
ACAAAGCTGTTTAGATTCATTGAGCTTTGTCAGCAAAACGTCAATCAGGA
AAGAACAGCAAAGAAGCATTTAACAGAACTACCAAAAGAGCTCAAGAAGA
ATCCTCTAAAGCAGAATccattaaaaaggaaaaaagaaccgATGGAATCA
GAAGAATGCATAGAAGAAGCACCTGAttcaaaaaaagccaaaaagcagaa
gaagaaaaatagccCTTTCAAATCTTATCACACTGACAAAGCTCGCTCTT
CAGGCTGGGGGCGCATGCGTAGGAGAGGGATATCTAGCTTTTATTGTGAT
AAGAATAAAAGTGCTGAACGGTTGCTGTATTTGTTGACAAAGTTTAAAAA
CCGAAACAATTGGAATCATCGGCAAGTTCTTGGTTACGCTCATCCAAAGA
TATCCAAAGATGATGAGGAACAAGATGGCAAGAATTTGGTCCTGGCGTAC
TGCACCAGAGGCGTGGAAGGTTTTCAGAAGAAGCTAAACGAAATCAAGAG
AAGATCAGCAAATTGTTTGCCACAGAATGTGTCTCGTATTCAAAACTTTG
TTCAAATTCTTGAACAGGTCAGTAAGCTATCACCAGAAAATGAAGGTGAT
GAAGAGAAGCTATTGGAATTTTTACGTGGTTATGGCATTCGTGAAAGTGC
TGACGAGTTTGCAGTTGAAATTGTACTCCCTGGAGTCCCCCTCACTCCAC
CTCCACCATCATCTGgtaaagaaaaagcaaaaaattctAAGCAACCATTC
CAAGTTGTGCGAGAACATATACCAACTGCGTTCCTCAGTTCTGCAAAGGG
AGAAGGGGCAGTCAAAATGGAGACAGACCTTCCAATGAAGAGGACGACGC
AACTGCTCAAGGTGAGCAACAACTCAGTCAAGTTGAGCAACAGCTCGGTC
AAGTTGGATTAGATGATCAATCATCAAATGATGCTCCTGGAGCTGTCGGA
GGCCCACCTATTGTTCCTGCTGGAGCATCTTCCGGAAATGGAGCAGTAGC
AGGAGGTTCTGGAGGTGCCATTGGTGGTGACGGAGTCTACACAACTAGCA
AAGAGATGTACGATAATAGTACAGACTACATTGTAGCATCTTTAGCAGAG
GGAATGGTACCTAATGAGGACCAGAGTGGATTCTCTTTCCAAATAGAACT
AATCAAACGGCTGGAGAGGTTTCTTATCCTTGGTACAGAGGGAAATACTT
ACTATGCAAGTGAAAAAGACAGAACATATGAAAACATAAGTTGTATAAAT
GAGCTCTTAGAAAAAGGAGAAGTGGATAAGGTTTTGCACATTCTCAAAAC
ATTTAGTGTTCAAGGGAGATGTCCAAAAGAGGAACCAATCCTGGTTGCTT
TGGTGCAATGTTGTTATTTCCAAAATGCTGAGATCCGTAAGAAGGCTTAT
GATTTAGTTACTCCAATTTGTAATATACCAACAAAGCTGTTTAGATTCAT
TGAGCTTTGTCAGCAAAACGTCAATCAGGAAAGAACAGCAAAGAAGCATT
TAACAGAACTACCAAAAGAGCTCAAGAAGAATCCTCTAAAGCAGAATcca
ttaaaaaggaaaaaagaaccgATGGAATCAGAAGAATGCATAGAAGAAGC
ACCTGAttcaaaaaaagccaaaaagcagaagaagaaaaatagccCTTTCA
AATCTTATCACACTGACAAAGCTCGCTCTTCAGGCTGGGGGCGCATGCGT
AGGAGAGGGATATCTAGCTTTTATTGTGATAAGAATAAAAGTGCTGAACG
GTTGCTGTATTTGTTGACAAAGTTTAAAAACCGAAACAATTGGAATCATC
GGCAAGTTCTTGGTTACGCTCATCCAAAGATATCCAAAGATGATGAGGAA
CAAGATGGCAAGAATTTGGTCCTGGCGTACTGCACCAGAGGCGTGGAAGG
TTTTCAGAAGAAGCTAAACGAAATCAAGAGAAGATCAGCAAATTGTTTGC
CACAGAATGTGTCTCGTATTCAAAACTTTGTTCAAATTCTTGAACAGGTC
AGTAAGCTATCACCAGAAAATGAAGGTGATGAAGAGAAGCTATTGGAATT
TTTACGTGGTTATGGCATTCGTGAAAGTGCTGACGAGTTTGCAGTTGAAA
TTGTACTCCCTGGAGTCCCCCTCACTCCACCTCCACCATCATCTGgtaaa
gaaaaagcaaaaaattctAAGCAACCATTCCAAGTTGTGCGAGAACATAT
ACCAACTGCGTTCCTCAGTTCTGCAAAGGTTTGGGAAGCATTGTTGCAAG
ACATGCCAATGACAGCTATGCTGCGAAACTTGGGGAAAATGACTTCCCTT
GGTTTGTTTCAGAAGCCCGAAAACTTGAAAATTGTATTGGACGCTTTAGG
TGATACAAATCGTCTTCAGAAAGCAAGAATTCATCCCATTAAGGTTTGGG
AAGCATTGTTGCAAGACATGCCAATGACAGCTATGCTGCGAAACTTGGGG
AAAATGACTTCCCTTGGTTTGTTTCAGAAGCCCGAAAACTTGAAAATTGT
ATTGGACGCTTTAGGTGATACAAATCGTCTTCAGAAAGCAAGAATTCATC
CCATTAAGCTTTTGATTGGGATGAAAGCGTATGAAAATGGTGCTTCATTA
AGTATGATGAGTTCTGTCACAAAGACAAACACAACAACATGGGAAGCAaa
ccaagaaattttgaaaatcttggatAAAGCCTTCTATAAAAGCTTTAAGC
TTTTGATTGGGATGAAAGCGTATGAAAATGGTGCTTCATTAAGTATGATG
AGTTCTGTCACAAAGACAAACACAACAACATGGGAAGCAaaccaagaaat
tttgaaaatcttggatAAAGCCTTCTATAAAAGCTTTAAGCAACCAGAAA
CGCAAGATGCATTTAGAACAGGGAAACGGTTTATGTTGGCATTGGATGTC
AGTGGTTCAATGACATGTGGTGGCTGTAATGGTTGTGAACAGCTCACCCC
CTCCATAGCTGCCACCGCACTCTCTATGGTCACATGGAATATAGAAGAGC
ACGTGGAAATGGTGGCCTTTGGTGGTCGTTTGGAGCGATTGGAAGATCAT
GGTTTACGCAAAGATTTGACCATCAATGATGCTTGGAGGAAGATGAGTCG
GCAACCAGAAACGCAAGATGCATTTAGAACAGGGAAACGGTTTATGTTGG
CATTGGATGTCAGTGGTTCAATGACATGTGGTGGCTGTAATGGTTGTGAA
CAGCTCACCCCCTCCATAGCTGCCACCGCACTCTCTATGGTCACATGGAA
TATAGAAGAGCACGTGGAAATGGTGGCCTTTGGTGGTCGTTTGGAGCGAT
TGGAAGATCATGGTTTACGCAAAGATTTGACCATCAATGATGCTTGGAGG
AAGATGAGTCGGATCAACTTTGGTTCAACAGATTGTGCGTTACCAATGAA
TTATGCGATAGACCGTAATCTTGATATTGACGTCTTCATTGTTTACACCG
ATTCCGACACTAATTCATATAATCATCCTCACAAAGCATTGCAAAGATAT
CGCGAAAAGATGGGTAAACCTAACGCTAAACTCATCGTGATCGCCTTGAC
ATCCAATGGGTTTTCTATCGCCGATCCTAACGACCGCCACATGCTGGATG
TTGTTGGCTTTGATCCAGCTGTCCCTGAGATGATCTGCAATTTTGTTAAC
GACAGTTATTGAATCAACTTTGGTTCAACAGATTGTGCGTTACCAATGAA
TTATGCGATAGACCGTAATCTTGATATTGACGTCTTCATTGTTTACACCG
ATTCCGACACTAATTCATATAATCATCCTCACAAAGCATTGCAAAGATAT
CGCGAAAAGATGGGTAAACCTAACGCTAAACTCATCGTGATCGCCTTGAC
ATCCAATGGGTTTTCTATCGCCGATCCTAACGACCGCCACATGCTGGATG
TTGTTGGCTTTGATCCAGCTGTCCCTGAGATGATCTGCAATTTTGTTAAC
GACAGTTATTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000089_pilon | genome | sc0000089_pilon:508620..514649 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 2032-2331:5731 |
| Aaloc | 1771-2031:5258 |
| Aaloc | 1630-1770:4961 |
| Aaloc | 1465-1629:4636 |
| Aaloc | 37-1464:3014 |
| Aaloc | 1-33:1 |
|
