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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000089_pilon:660853..665226+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_044121 ID=XLOC_044121|Name=XLOC_044121|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4374bp|location=Sequence derived from alignment at sc0000089_pilon:660853..665226+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAATTCTACCATCACAACACCGTACACATTCCAATCAAGTACGGTCAA
CAAAACAACCACTTACACAGTCCAACCTAACACGAACCCTCCGTCCACCA
CACCTTACACAAGCATGGTAAATACGACAACAATGAACGGACTGTCAACA
ACGGAAGAGTCCGAGCATGGTGTGATAGATCTGCCATTGGGGGCAAGTCT
GCTTGTAATCAACATATGTAtcattgttttaaatgttttcattaTCGCGG
TCATCGTGAGATTTCGAACGAAAAACGCAATTGATGTTTTCGTGCTGGCT
CTTGCGACGACCGACCTTATCAAAGGACTGATTCCCGTTCCGATGTCAGT
TTATATTTACCTAACGGAATGGTATTTGATCGAAGGTAAGGAGACGAGCA
CGTTCCGCTTACGACTTGCAGATTACGATTAATCCAAACGCAATGGAATA
TGATTATGTTTGGATTGGCACTTTTAGATGTTAATCCGTTCTAGATTTAG
CTTTcgtataaattgatgttttttttcaaataagatTGATTTCATAAACC
AGCTGAAAGGGAAAAAAGACCTGTGGCTGAAAAATCATTTTCCTAAACGA
GGCTAGCTATATAATTGCACTTCTTCAGATTGTTATTTGTTAAGAGCGAA
AAATTCAATTGAAATTATCTCAAAGCAGAAGAAAGTTTTTTCGGAAACAG
CAATGTTTAAAATGACAACACTTCAAATTTGAATTTGGCGAAAATATTTC
AACCTCAAATATGAAACGGAAATTAAGGACTACAAATTTGGTTTTCCAAA
TTTTAACTTTCTCATCAAAAATGTAAAATGAGAGATTACAACGGAAATTA
CAATGATTGCTTTGTGCAGATTCTAGCTTTTAGAGCTGAATTAGTCGCTA
AACACAGGGTCAAAGGGGATGGATGACCTGGAATCAATTATTGAATACAA
TAAGAATAAGCCTTTGTTCTATCATACCCTTTTTCACTTTTATTCAGGTT
CGTACGCGTGTGATTTCTTCGGTTGGATCGCCTTCACCACAAATTCTGGT
TCAATGTTGTTGCTAACACTCATGTCCATCGAACGTTTCGTTGCCATAGC
ACACCCCTTCGCGTACAAAGCTTGGGTTCGACCTAACAAAATACTCGCCA
TTATTCTAACAGCTGAGGTTTTCACGGGGATTCATTCCGCCCTCCCTTTA
CTGGGTGTTGGGCGTATTCTACCGTACAACGGTGGCGCTTATTCACACTT
CGATTATTCGCGTTATGATTATGGTACAATGGCTTACTCGGTGTTCATTA
TCTGTTATGGTTTCAGTATGATACTGGTTGTCATGGTAGCGTATAGTTTC
GTCTTCCATAAAATTCGTGATCTGATACACCGCCACAAGCGGATGACGAA
CGCACGGTCAGATGGTTCTGTGAGACGCGATAAATCGATAAGACAGTTGA
ACTTGAAAACGGAGACAATGTTTTCGTATTTGACGGTTGCACTGATGGTT
TTGTTCTGGTTCAGTTGGCTCCCATTCTTGGTAAGTTTGTTTTGTCAATG
ATGAGTACAGTGACTATAATCACAAATCAAAGTAGGGTGGAGCAAAATTA
AACATaccccaacctcgttccctgtgtataACCAGCTTTGCTTACTTATA
GTGCTAGATAATAATATTCTCTGGCatctatcagtaacgtaaataaaggg
ATCCAAATAAAGCCttgaatacacggggacgaggttgaacATACTCATGG
GTCCAGTAACCTGATACCGGTTGGGCCAAGATGAAATAGTTGAACGCATA
AACTGATTAAATTATAGGGTCTTCTCATCAGTGCATCTTCCCAATATGAA
TGAGTTTTAAGTACTTTTCAACTGAAGCAAATTATCCTGTGGTTGAGGGC
TGGACCAGGTTTTgtgacaatttttgaaaatatacaaatatttttttaga
tgGTGGTGGTGGCAAGCCAGATTGGAGCCAAGCAACCCCATGGGAAGCTC
GATTTGTTTGCCATACGAATCGCAGTTGTCAACTCCATGCTGAATCCGAT
TGCATGTGCTGCTCTATGTAAACCATACCGAAACGGAATCATGTATTATT
TTCGGGtttttttGTCTTACTTCGGATTCAAGAAACCGGACGACAATGTA
TGGGGTGAGTTATGTAAAACACTCTTGTCTCGATGACCCAGTTAGAACTC
TAGCCAGTCAGAGTGAAATAAAGGAGCTAAAAATACCGTTGGCTGTCTTG
TTTTTAGTGAGGGAGTTACCTCAAAACTTCGTTTTTCTTTTAGACCCGTG
GAAGAAGAACACTCGCCGTCATCACACGCGACGTCACAAACCAAGCGTTG
TCGACTTCAATGAACGTGACTTCGCCCGATCGGAAATCTTTGCTTCTTCG
TACGATGATTCGGGTTTGGGTACGGGTGAATTTTGTCGGACACGAATCCC
TTCTGTTCTCGATTCTTTTGAATGTTATCGTCAAAAAATCTCATCTCGGT
GTGAAGGAGAGCCATTACTTTCAAGCACTGAGAAGGAGGGTTTCATGAAT
GGAGATCATCATAAACACATCGCACTTTCATGTAACCATGGTAACTACAT
ATCATATAATAACTCATCCACCCATCCATTTGTTCATTTACATTCAGTTT
CATTGTGATGGAGTCAATAACATTCGCAGTTTTTCCACAAAACTTTAATA
TCAATTTAGCATACCATGAAATGCCATATGGCCAAGTCACGTATTTAGCC
TTCTTTCTGTCTCGTATGTATTATCTTGACCTCattcaaaatttaccaaa
aattcaaatattcaaaaattataatgtTGCTATATATCCGATTACTTAAG
CACAATAATTATATTTCTTTCAAACACGGAGTTTTCTCTTCatctaggct
tctgctcatcctctagcgaaaaaaggaAGTATATatatagaggtctgtga
ttcagactactCTTTATCtaatttcaatttctattttgtttgtaGCTGCG
CAAGGGATTTATCGTAAGCAATCGAAAGATCGAGAAAGTTTATCCACTCT
GTCTTCCCAGGGATCGGAAACTTCCGATTTAGAGGACGGCAGGCGAAGTA
AATCTTCATCtcgtaaaaattcaaaatatcgaaAGAAATCCAGTGTGAGG
GAGGGTCCTGATGCCAATAAACTAGTGAATGGAACGCCTACTCCGTTGCA
GAGGCGTAAAAAGATTTTCGTAGAGAAAGTTCAGAAATATATTCATCAGA
AAAAAGAACGCAAACACTCGTTTGATCTATTGGACGAAAAACCCGTTCGA
AAAACCATCTCTGCGGGGGATCTTTTGGATCCAGATTACATACAAATGCA
AGAGAGACATCGAGAGAAAcgaaaagtgaaaagttttcaagtcaagttga
agaaaaatgaagactACGAATCGAGTGGAAATGAGGCTGAAGAAAACGAC
CGCCTTCTTGTGGCGGTACACCCAAGACGTGAAAGGGCGTCCACCCTGGG
TGAAATGGACGAACTTGTAACCACCTTATCCAACAAGCATCCTTCTTGGA
AAAACCTGAATCAACAAGAGGATATCGAAACACCTGATGTAAATGACCAA
CACTGCTCGGATGACAAGGGCCATCATCAAGACAAAGTGCTGTTGCCAAG
ACAACCGTTCGTTGCAAATGGCAGCGCGTACACCATAATAGATGGTCCAG
AAGAAGAACGACTAAAAGGTGAGTGGAGAAATGTTCTGATGTCAACATCT
TGAAGTTCTGATGTCAACATCTTGAAGTATTTGAACCGGGGGAGTACTTG
GGCACAAAGGGGTACGGAATGtgtcgctggtcagggtaccttttttcgcC
TCCCAAAACACCAAAACCCTACTCTTGTAGAGTACCTTTTCGGGGATTTG
GAGAAAATATGGAGAAAtatggaatttcagtcccattgagtgtcactttt
ttaaaaaatgagtCCCTTTtggggtccatttttcgaaattcagcgCCACA
CCCCTGTCTGTCGGAAAGGCTATTACTCCCCTCTCCCGGGGTATTTGAGA
CAGTTGGTTGAGGATGATGGAGTGAAATAAAATTGTGAGAAGTTATTCAT
TCATATCGCAGAAGATCGTAAAAATCCCATTCTATTTTTGACAGGATATT
CAACACAAAAGAGTGAAGAAGAGAGGCGATGTGTTTCAGAAGCATTTTCG
GACGACACCACCATCCCTTTGGACAATATGGCGGCAAAAGCTTCGAAGAA
TGGGAAAGTTGCTACACATACGTCCGCACATTCGTTGAAAATGATTGATC
ACGTGACTAAAGAACTGGTTGAATTTTCACAAAACTCTTTGAATAATTCA
GCCTCCAATCAACCAATCACGTAA Coding sequence (CDS) from alignment at sc0000089_pilon:660853..665226+ >XLOC_044121 ID=XLOC_044121|Name=XLOC_044121|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=4746bp|location=Sequence derived from alignment at sc0000089_pilon:660853..665226+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAATTCTACCATCACAACACCGTACACATTCCAATCAAGTACGGTCAA
CAAAACAACCACTTACACAGTCCAACCTAACACGAACCCTCCGTCCACCA
CACCTTACACAAGCATGGTAAATACGACAACAATGAACGGACTGTCAACA
ACGGAAGAGTCCGAGCATGGTGTGATAGATCTGCCATTGGGGGCAAGTCT
GCTTGTAATCAACATATGTAtcattgttttaaatgttttcattaTCGCGG
TCATCGTGAGATTTCGAACGAAAAACGCAATTGATGTTTTCGTGCTGGCT
CTTGCGACGACCGACCTTATCAAAGGACTGATTCCCGTTCCGATGTCAGT
TTATATTTACCTAACGGAATGGTATTTGATCGAAGATGAATTCTACCATC
ACAACACCGTACACATTCCAATCAAGTACGGTCAACAAAACAACCACTTA
CACAGTCCAACCTAACACGAACCCTCCGTCCACCACACCTTACACAAGCA
TGGTAAATACGACAACAATGAACGGACTGTCAACAACGGAAGAGTCCGAG
CATGGTGTGATAGATCTGCCATTGGGGGCAAGTCTGCTTGTAATCAACAT
ATGTAtcattgttttaaatgttttcattaTCGCGGTCATCGTGAGATTTC
GAACGAAAAACGCAATTGATGTTTTCGTGCTGGCTCTTGCGACGACCGAC
CTTATCAAAGGACTGATTCCCGTTCCGATGTCAGTTTATATTTACCTAAC
GGAATGGTATTTGATCGAAGGTTCGTACGCGTGTGATTTCTTCGGTTGGA
TCGCCTTCACCACAAATTCTGGTTCAATGTTGTTGCTAACACTCATGTCC
ATCGAACGTTTCGTTGCCATAGCACACCCCTTCGCGTACAAAGCTTGGGT
TCGACCTAACAAAATACTCGCCATTATTCTAACAGCTGAGGTTTTCACGG
GGATTCATTCCGCCCTCCCTTTACTGGGTGTTGGGCGTATTCTACCGTAC
AACGGTGGCGCTTATTCACACTTCGATTATTCGCGTTATGATTATGGTAC
AATGGCTTACTCGGTGTTCATTATCTGTTATGGTTTCAGTATGATACTGG
TTGTCATGGTAGCGTATAGTTTCGTCTTCCATAAAATTCGTGATCTGATA
CACCGCCACAAGCGGATGACGAACGCACGGTCAGATGGTTCTGTGAGACG
CGATAAATCGATAAGACAGTTGAACTTGAAAACGGAGACAATGTTTTCGT
ATTTGACGGTTGCACTGATGGTTTTGTTCTGGTTCAGTTGGCTCCCATTC
TTGGTTCGTACGCGTGTGATTTCTTCGGTTGGATCGCCTTCACCACAAAT
TCTGGTTCAATGTTGTTGCTAACACTCATGTCCATCGAACGTTTCGTTGC
CATAGCACACCCCTTCGCGTACAAAGCTTGGGTTCGACCTAACAAAATAC
TCGCCATTATTCTAACAGCTGAGGTTTTCACGGGGATTCATTCCGCCCTC
CCTTTACTGGGTGTTGGGCGTATTCTACCGTACAACGGTGGCGCTTATTC
ACACTTCGATTATTCGCGTTATGATTATGGTACAATGGCTTACTCGGTGT
TCATTATCTGTTATGGTTTCAGTATGATACTGGTTGTCATGGTAGCGTAT
AGTTTCGTCTTCCATAAAATTCGTGATCTGATACACCGCCACAAGCGGAT
GACGAACGCACGGTCAGATGGTTCTGTGAGACGCGATAAATCGATAAGAC
AGTTGAACTTGAAAACGGAGACAATGTTTTCGTATTTGACGGTTGCACTG
ATGGTTTTGTTCTGGTTCAGTTGGCTCCCATTCTTGatgGTGGTGGTGGC
AAGCCAGATTGGAGCCAAGCAACCCCATGGGAAGCTCGATTTGTTTGCCA
TACGAATCGCAGTTGTCAACTCCATGCTGAATCCGATTGCATGTGCTGCT
CTATGTAAACCATACCGAAACGGAATCATGTATTATTTTCGGGttttttt
GTCTTACTTCGGATTCAAGAAACCGGACGACAATGTATGGGatgGTGGTG
GTGGCAAGCCAGATTGGAGCCAAGCAACCCCATGGGAAGCTCGATTTGTT
TGCCATACGAATCGCAGTTGTCAACTCCATGCTGAATCCGATTGCATGTG
CTGCTCTATGTAAACCATACCGAAACGGAATCATGTATTATTTTCGGGtt
tttttGTCTTACTTCGGATTCAAGAAACCGGACGACAATGTATGGGACCC
GTGGAAGAAGAACACTCGCCGTCATCACACGCGACGTCACAAACCAAGCG
TTGTCGACTTCAATGAACGTGACTTCGCCCGATCGGAAATCTTTGCTTCT
TCGTACGATGATTCGGGTTTGGGTACGGGTGAATTTTGTCGGACACGAAT
CCCTTCTGTTCTCGATTCTTTTGAATGTTATCGTCAAAAAATCTCATCTC
GGTGTGAAGGAGAGCCATTACTTTCAAGCACTGAGAAGGAGGGTTTCATG
AATGGAGATCATCATAAACACATCGCACTTTCATGTAACCATGACCCGTG
GAAGAAGAACACTCGCCGTCATCACACGCGACGTCACAAACCAAGCGTTG
TCGACTTCAATGAACGTGACTTCGCCCGATCGGAAATCTTTGCTTCTTCG
TACGATGATTCGGGTTTGGGTACGGGTGAATTTTGTCGGACACGAATCCC
TTCTGTTCTCGATTCTTTTGAATGTTATCGTCAAAAAATCTCATCTCGGT
GTGAAGGAGAGCCATTACTTTCAAGCACTGAGAAGGAGGGTTTCATGAAT
GGAGATCATCATAAACACATCGCACTTTCATGTAACCATGCTGCGCAAGG
GATTTATCGTAAGCAATCGAAAGATCGAGAAAGTTTATCCACTCTGTCTT
CCCAGGGATCGGAAACTTCCGATTTAGAGGACGGCAGGCGAAGTAAATCT
TCATCtcgtaaaaattcaaaatatcgaaAGAAATCCAGTGTGAGGGAGGG
TCCTGATGCCAATAAACTAGTGAATGGAACGCCTACTCCGTTGCAGAGGC
GTAAAAAGATTTTCGTAGAGAAAGTTCAGAAATATATTCATCAGAAAAAA
GAACGCAAACACTCGTTTGATCTATTGGACGAAAAACCCGTTCGAAAAAC
CATCTCTGCGGGGGATCTTTTGGATCCAGATTACATACAAATGCAAGAGA
GACATCGAGAGAAAcgaaaagtgaaaagttttcaagtcaagttgaagaaa
aatgaagactACGAATCGAGTGGAAATGAGGCTGAAGAAAACGACCGCCT
TCTTGTGGCGGTACACCCAAGACGTGAAAGGGCGTCCACCCTGGGTGAAA
TGGACGAACTTGTAACCACCTTATCCAACAAGCATCCTTCTTGGAAAAAC
CTGAATCAACAAGAGGATATCGAAACACCTGATGTAAATGACCAACACTG
CTCGGATGACAAGGGCCATCATCAAGACAAAGTGCTGTTGCCAAGACAAC
CGTTCGTTGCAAATGGCAGCGCGTACACCATAATAGATGGTCCAGAAGAA
GAACGACTAAAAGCTGCGCAAGGGATTTATCGTAAGCAATCGAAAGATCG
AGAAAGTTTATCCACTCTGTCTTCCCAGGGATCGGAAACTTCCGATTTAG
AGGACGGCAGGCGAAGTAAATCTTCATCtcgtaaaaattcaaaatatcga
aAGAAATCCAGTGTGAGGGAGGGTCCTGATGCCAATAAACTAGTGAATGG
AACGCCTACTCCGTTGCAGAGGCGTAAAAAGATTTTCGTAGAGAAAGTTC
AGAAATATATTCATCAGAAAAAAGAACGCAAACACTCGTTTGATCTATTG
GACGAAAAACCCGTTCGAAAAACCATCTCTGCGGGGGATCTTTTGGATCC
AGATTACATACAAATGCAAGAGAGACATCGAGAGAAAcgaaaagtgaaaa
gttttcaagtcaagttgaagaaaaatgaagactACGAATCGAGTGGAAAT
GAGGCTGAAGAAAACGACCGCCTTCTTGTGGCGGTACACCCAAGACGTGA
AAGGGCGTCCACCCTGGGTGAAATGGACGAACTTGTAACCACCTTATCCA
ACAAGCATCCTTCTTGGAAAAACCTGAATCAACAAGAGGATATCGAAACA
CCTGATGTAAATGACCAACACTGCTCGGATGACAAGGGCCATCATCAAGA
CAAAGTGCTGTTGCCAAGACAACCGTTCGTTGCAAATGGCAGCGCGTACA
CCATAATAGATGGTCCAGAAGAAGAACGACTAAAAGGATATTCAACACAA
AAGAGTGAAGAAGAGAGGCGATGTGTTTCAGAAGCATTTTCGGACGACAC
CACCATCCCTTTGGACAATATGGCGGCAAAAGCTTCGAAGAATGGGAAAG
TTGCTACACATACGTCCGCACATTCGTTGAAAATGATTGATCACGTGACT
AAAGAACTGGTTGAATTTTCACAAAACTCTTTGAATAATTCAGCCTCCAA
TCAACCAATCACGTAAGATATTCAACACAAAAGAGTGAAGAAGAGAGGCG
ATGTGTTTCAGAAGCATTTTCGGACGACACCACCATCCCTTTGGACAATA
TGGCGGCAAAAGCTTCGAAGAATGGGAAAGTTGCTACACATACGTCCGCA
CATTCGTTGAAAATGATTGATCACGTGACTAAAGAACTGGTTGAATTTTC
ACAAAACTCTTTGAATAATTCAGCCTCCAATCAACCAATCACGTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000089_pilon | genome | sc0000089_pilon:660853..665226 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 2146-2373:4147 |
| Aaloc | 1423-2142:2998 |
| Aaloc | 1126-1419:2296 |
| Aaloc | 919-1122:1950 |
| Aaloc | 388-918:1000 |
| Aaloc | 1-384:1 |
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