|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000107_pilon:809723..812451- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_044096 ID=XLOC_044096|Name=XLOC_044096|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2729bp|location=Sequence derived from alignment at sc0000107_pilon:809723..812451- (Clytia hemisphaerica_ch_hm2_pilon)
ATGCCAAACACAAAAAAGGTGAGGAACTCAAGACCCAAGAACTGGCTTCC
AAAAAAAGCCAAAGACATTGAAAAGTTTTTGAAGAAATTCAAAAAAGATT
ATATTGAGGATTCAAAGAAGTACAAAAAGCTATACGAGTTGATCACCAAA
TACCATCCTATTATTAAAAAAGGTCAAGCTGGCACTAAAGAAGAATTGAG
ACCGTATGTCACTAAAAAGGAAATTGAAGAGTTGGATCTACACGAGCCTG
TCAGAGAATTGTACGTTTTAATCATCACAGATCCGGAAGTGAATATGTTC
TTCAACCAAATGTTTTGGAATCAAAATCCAGAGTACGAAAAGCTTTGTGA
CTCTTGGCAAGATTTTATCGTGCAGTTGGATGCTATTATGACATACACAC
CAGTTTACAGCAGAGATGCTTTAGTTGGATTCCCAATCAATGCTTTGGTG
AATTGGCCAATGGCGACTGCTGATGGATATGCATGCTTCTTGAATGATAA
GGTAGCTTTACACGCTTTTTTATAAGAACTAAGCCTAAAAAAGTTCTTAA
CATTTCTTATTTTCACCATTTTTTGAGCATTTTTATTCATTTTCTTAAGA
AATCGGCCGATTAGAGTCCGCAGAGCCTTAAAACGTTCTTAATATTTTGG
CTATAGAAGCCTTATGTTCTTATATAGCTTGTTCCTATCAAAAACGTGTA
TTACAGAATTACACCCCTGTATTTTAATGCGTGTTTGTATACACTTCTTT
TATAAAAGCAGTAAATTTGATAGATTTGGGTTCATTGTTAAATCTTGTTC
AAAAATGGAGCTTATTGTTACTACTGTATGTTGTTAAAACCCCGGAGAAA
TTCTCAAAATTGACACAAATCCACAATATCGAAAAACAGTCCAAGTTAAT
GTCTTAAATTCATTTCTCAATGCTTTTATTTGTTTCATTCCTTAGGTCAA
TGCAATCTTAAAGAGAGTGCTGAACTACTGGGCCCAATTTCTAATGAGTC
CTGCATCGCGTTCCGTTTTACATTCTGGTGAAGAGGGGTGGTTCTGTGAA
GATGCCCTTAAAGATATGGAAGATGATTTTGGAAATTCGTTTACTGATCA
ATTCCAGTGTAATTCAGATGAAGAGCATTATGGTTTCAAAAGTTGGGATG
ATTTCTTTACAAGACAATTTCGCCCTGGTAAGAATTAGTCGTTGAAAAGT
GTTTTGTGAGAAAAATAATCAATCAATATATGGAGACTTTATCCTTCAAG
GAATAATCAAATGGTTTGAGATGTTTAGATTACAGAAACCTTTTGTGGTT
CTTAGTAGAACTTCAAAGTATTTTTGTGTAAATATTTTTCAACATCGAGA
TATCAAAATCTCAAATTTTTGAAAATGGGTTCTTACCCAGTCTGGAAAGG
AGGGAAATGTTACGCCGGAGCTGCGCCAACTTGACTGGGAAAAGTTGAAG
GCAGCAGATCTCATACCTCAAATCTACGCCTTAGATCTTTCCAGACTGGG
TTCTTACACGGTTCTTACGTTGAAATTCTATTGTTTTTATTCTAAAAGCC
AAAATCTTAACCTAAATATCTCGACTTTGGGAAAATAGTTAGGCAAAAAC
ATTTTGAGATTTTGCTCAGGACAAATAAAAGGATGCCAAATATTAAAAAC
CATCTGATTATCCCTTTAAACGGAAATGATATCTGGATGACCATGGCTCC
TTAAATTTTTGAAAATTCGGCTTCAAAACCACACTCAATCAAACATACGT
TTGTCAAAGGCACATCCATAATTTTAATGAACTCGAGTTTTAGGCGTAAT
ACTCTTATTTTTACCATTTTTGTGAGTACTTTTGTGTAATCTCTTAAGAG
ATGGGGATGTGTTAGATTCTGTTAAGCCTTTTAACTTATGTTCATAATAT
TTTGGTCATCAAATGTCCTTATATAGTGTGTTCTTACAAAAACGTGTATG
TATAAAGAGGATGAAAATGTCTGAAGCCTTGTCGTCTTACTGAATAAGAT
AATGCCTGTCGATATAGTGCTTTAAGGGGCGTGTCTTAGGTTTTCTGTGG
ATATAAGGATTGTTACCTTTTGTTAATAGGTGTACGACCATTGCCAAGCC
CTGATGCTGATAACATCATTGCAAACGCTTGTGAATCTGCACCATACAAG
ATCGAAACTGGAGTCAACCCAAAGAGTGTATTCTGGATGAAAGAACAACC
TTATTCCCTTGATCACATGTTGAGCCATAATGGATGGGCTGAGTATTTCC
ATGGTGGTACGATTTACCAAGCTTTCTTGTCTGCTCTCAGCTACCATCGC
TGGCATTCACCAATCTCTGGTACCATTATTGAAACGGAGATCATTGATGG
TTCTTACTACTCACAAACGCATGTTATCCAAGATGATTATGCTTCACCAA
ACATGTCACAAGGTTACATCACACATGTTGCTGCACGTGCTGTCATCTAT
ATTATGGCAGATAACCCCCTGATTGGTGTCCTTGGATTTGTTTCGATCGG
TATGTCGGAAGTCTCTTCAAATGATATTACAGTCAAGAAAGGCCAACATG
TTGAGAAGGGTGAGCAGTTAGGAATGTTCCATTTTGGCGGTTCCACCCAT
TGTCTTTTATTCCGCCCTGGAGTCAGTGTACAATGGGAGGAGTGCTGTCA
AAATCCAAGCTTGGATGCAGATAATATTCCACTTCATCAGAAGATCGGCA
CTGTAATGAAAGCTACTCAACCAAAATAA Coding sequence (CDS) from alignment at sc0000107_pilon:809723..812451- >XLOC_044096 ID=XLOC_044096|Name=XLOC_044096|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2766bp|location=Sequence derived from alignment at sc0000107_pilon:809723..812451- (Clytia hemisphaerica_ch_hm2_pilon)
ATGCCAAACACAAAAAAGGTGAGGAACTCAAGACCCAAGAACTGGCTTCC
AAAAAAAGCCAAAGACATTGAAAAGTTTTTGAAGAAATTCAAAAAAGATT
ATATTGAGGATTCAAAGAAGTACAAAAAGCTATACGAGTTGATCACCAAA
TACCATCCTATTATTAAAAAAGGTCAAGCTGGCACTAAAGAAGAATTGAG
ACCGTATGTCACTAAAAAGGAAATTGAAGAGTTGGATCTACACGAGCCTG
TCAGAGAATTGTACGTTTTAATCATCACAGATCCGGAAGTGAATATGTTC
TTCAACCAAATGTTTTGGAATCAAAATCCAGAGTACGAAAAGCTTTGTGA
CTCTTGGCAAGATTTTATCGTGCAGTTGGATGCTATTATGACATACACAC
CAGTTTACAGCAGAGATGCTTTAGTTGGATTCCCAATCAATGCTTTGGTG
AATTGGCCAATGGCGACTGCTGATGGATATGCATGCTTCTTGAATGATAA
GATGCCAAACACAAAAAAGGTGAGGAACTCAAGACCCAAGAACTGGCTTC
CAAAAAAAGCCAAAGACATTGAAAAGTTTTTGAAGAAATTCAAAAAAGAT
TATATTGAGGATTCAAAGAAGTACAAAAAGCTATACGAGTTGATCACCAA
ATACCATCCTATTATTAAAAAAGGTCAAGCTGGCACTAAAGAAGAATTGA
GACCGTATGTCACTAAAAAGGAAATTGAAGAGTTGGATCTACACGAGCCT
GTCAGAGAATTGTACGTTTTAATCATCACAGATCCGGAAGTGAATATGTT
CTTCAACCAAATGTTTTGGAATCAAAATCCAGAGTACGAAAAGCTTTGTG
ACTCTTGGCAAGATTTTATCGTGCAGTTGGATGCTATTATGACATACACA
CCAGTTTACAGCAGAGATGCTTTAGTTGGATTCCCAATCAATGCTTTGGT
GAATTGGCCAATGGCGACTGCTGATGGATATGCATGCTTCTTGAATGATA
AGGTCAATGCAATCTTAAAGAGAGTGCTGAACTACTGGGCCCAATTTCTA
ATGAGTCCTGCATCGCGTTCCGTTTTACATTCTGGTGAAGAGGGGTGGTT
CTGTGAAGATGCCCTTAAAGATATGGAAGATGATTTTGGAAATTCGTTTA
CTGATCAATTCCAGTGTAATTCAGATGAAGAGCATTATGGTTTCAAAAGT
TGGGATGATTTCTTTACAAGACAATTTCGCCCTGGTCAATGCAATCTTAA
AGAGAGTGCTGAACTACTGGGCCCAATTTCTAATGAGTCCTGCATCGCGT
TCCGTTTTACATTCTGGTGAAGAGGGGTGGTTCTGTGAAGATGCCCTTAA
AGATATGGAAGATGATTTTGGAAATTCGTTTACTGATCAATTCCAGTGTA
ATTCAGATGAAGAGCATTATGGTTTCAAAAGTTGGGATGATTTCTTTACA
AGACAATTTCGCCCTGGTGTACGACCATTGCCAAGCCCTGATGCTGATAA
CATCATTGCAAACGCTTGTGAATCTGCACCATACAAGATCGAAACTGGAG
TCAACCCAAAGAGTGTATTCTGGATGAAAGAACAACCTTATTCCCTTGAT
CACATGTTGAGCCATAATGGATGGGCTGAGTATTTCCATGGTGGTACGAT
TTACCAAGCTTTCTTGTCTGCTCTCAGCTACCATCGCTGGCATTCACCAA
TCTCTGGTACCATTATTGAAACGGAGATCATTGATGGTTCTTACTACTCA
CAAACGCATGTTATCCAAGATGATTATGCTTCACCAAACATGTCACAAGG
TTACATCACACATGTTGCTGCACGTGCTGTCATCTATATTATGGCAGATA
ACCCCCTGATTGGTGTCCTTGGATTTGTTTCGATCGGTATGTCGGAAGTC
TCTTCAAATGATATTACAGTCAAGAAAGGCCAACATGTTGAGAAGGGTGA
GCAGTTAGGAATGTTCCATTTTGGCGGTTCCACCCATTGTCTTTTATTCC
GCCCTGGAGTCAGTGTACAATGGGAGGAGTGCTGTCAAAATCCAAGCTTG
GATGCAGATAATATTCCACTTCATCAGAAGATCGGCACTGTAATGAAAGC
TACTCAACCAAAATAAGTGTACGACCATTGCCAAGCCCTGATGCTGATAA
CATCATTGCAAACGCTTGTGAATCTGCACCATACAAGATCGAAACTGGAG
TCAACCCAAAGAGTGTATTCTGGATGAAAGAACAACCTTATTCCCTTGAT
CACATGTTGAGCCATAATGGATGGGCTGAGTATTTCCATGGTGGTACGAT
TTACCAAGCTTTCTTGTCTGCTCTCAGCTACCATCGCTGGCATTCACCAA
TCTCTGGTACCATTATTGAAACGGAGATCATTGATGGTTCTTACTACTCA
CAAACGCATGTTATCCAAGATGATTATGCTTCACCAAACATGTCACAAGG
TTACATCACACATGTTGCTGCACGTGCTGTCATCTATATTATGGCAGATA
ACCCCCTGATTGGTGTCCTTGGATTTGTTTCGATCGGTATGTCGGAAGTC
TCTTCAAATGATATTACAGTCAAGAAAGGCCAACATGTTGAGAAGGGTGA
GCAGTTAGGAATGTTCCATTTTGGCGGTTCCACCCATTGTCTTTTATTCC
GCCCTGGAGTCAGTGTACAATGGGAGGAGTGCTGTCAAAATCCAAGCTTG
GATGCAGATAATATTCCACTTCATCAGAAGATCGGCACTGTAATGAAAGC
TACTCAACCAAAATAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000107_pilon | genome | sc0000107_pilon:809723..812451 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 736-1383:649 |
| Aaloc | 502-732:1785 |
| Aaloc | 1-501:2730 |
|
