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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000107_pilon:608459..610294- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_044086 ID=XLOC_044086|Name=XLOC_044086|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1836bp|location=Sequence derived from alignment at sc0000107_pilon:608459..610294- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGGGTTTGATTTTGCGATGCAATATTTGATATTCTTCTTCACTTTCCT
TGGTAATATGCCTTCCTCTGCACAACAAAGCTGTTACATGAACTGCAATT
GCTCAGGTACAGAGATCTCATGTGACGGTGCACCAAAAGACATTCTCAAT
GGAACCCCTCCCAAAAGCAACATTACGAAACTGATTCTGATCAACATGGA
GTTAGAAAATGATGTGTCATTGATGAAATTCCTGGAGAACCTAACGCAGC
TTCAATATATAGATTTATCATTAAATCAACTGACAGAAATACCGAAGCTG
GATAACTTGGCCACGTTAAACAATTTAGTTTTACGTCATAACAAAATCGA
AAACTTACCAAAAGAATTAGCTGATATCGAATTCAAAAATTTAACAATCG
ACTTGTCAGAAAATCCAATAAACTGTAACTGTACAACGGTGTACATAGTA
GAAAAGACACAAGAAATAAAATACAAAGGGATATGTACACAACAAAACAT
TAAAATAAATGAGCTGAATCACACCATGGTTGATTGTGACCCTTGTTCAA
TAAATAATGGAGGTTGTTCGTTAATCAAGACTTGCATTGCTGAAAATGCT
CTGAATGTAGTATGTATCTGTAATAATGGTTTTACTGGAGATTTCTGTCA
GATATCTCCCACCAACCCTGTACCATGCAAAATAAACAATTGTTTAAATG
GCGGTGTTTGCTTTCACGTTGAAAACACAAACTCTACATTCTGCGAGTGT
GTTTCCACTGACTATAGTGGTGACTTCTGCCAAAACAAAACAAGGAATGA
AACCACTAGAAAAACCACCTTAAGCTTGAACGCTATTACTGCGATTATTG
TCTCCTTATTGGTTTTATTGTTTGTGATAGTTTTCGGTTATTGGTATTGT
GTACATTTGCGTCCGAAACGTAGAAGAATGCGAGAGAGCCGAAAAAAGAA
AGCAAAGAATAGTTTCGATAGTCAAAACAGCATCGTCAATTACTATCTTC
AGGTAGGAATCATTGATGTACTTAGAAATCGATTAGTCATGCATTGTAGA
ATCACCGTACAATTACTAAAGTTTCTTATTGCCAGAAAAGCATTATTGGC
CTTTCCCGGGATCATTCCGCTTTTTTTCGTCTCCTACGTTAGGTCTCTAC
GTATGATAGCTGTATCCCGAGGTATTTGATTTTTAAGAAAAATATTTTTT
GCTGCGTCAGCATATTTTACGATATTCTAGCTGAATCAGCAAAACCTCAA
ATCCAAGTAATTCATTATCTAAGTTGTCATCGAAACCCTGTAAACCATAC
CATTTCAGTAAATTTTAAGGGCAATATTAGCTTGGTTTGAATGTTATATC
CTTTTTATTCCTCATTAATTTAGCATAATTAATTAAACTTCTGATTATAG
AACGAGGGTTACTTTCATGATGAGTCAACTAGCATACCAAATTCACCCAA
AGAGGTAAAGTAAAAAGTATGACTTACTTGGGGTTTGATCTTCAGTTTCT
ATCCATCACCTGCAATAAAGCAATTCTTAAAATGTGGATGTTAATTCCAG
AGACAGTTTCTGGCTTTTGTTTGGGCTTGATTGTTTCTTTCTCATACATC
ATTGATATTGTATTTTTTTAATCGTCTAAAATATAAGATCAGAACTAATC
AACAACGGCTATAATTTCTATTCTCGAAGCCTTTAAAACCTCTTAATATT
CTAGAGCGAAGAGAATTCGTACCCACACGACCCTGCACATAACCGTTGGT
TGCATGGACGAAGAAGATGTTCTACAATTTTGGAAGAAAAAGCAAGTCGT
GAGGGCAGTTGTATGGATGAAAATGAAAAGAAATAA Coding sequence (CDS) from alignment at sc0000107_pilon:608459..610294- >XLOC_044086 ID=XLOC_044086|Name=XLOC_044086|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2376bp|location=Sequence derived from alignment at sc0000107_pilon:608459..610294- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGGGTTTGATTTTGCGATGCAATATTTGATATTCTTCTTCACTTTCCT
TGGTAATATGCCTTCCTCTGCACAACAAAGCTGTTACATGAACTGCAATT
GCTCAGGTACAGAGATCTCATGTGACGGTGCACCAAAAGACATTCTCAAT
GGAACCCCTCCCAAAAGCAACATTACGAAACTGATTCTGATCAACATGGA
GTTAGAAAATGATGTGTCATTGATGAAATTCCTGGAGAACCTAACGCAGC
TTCAATATATAGATTTATCATTAAATCAACTGACAGAAATACCGAAGCTG
GATAACTTGGCCACGTTAAACAATTTAGTTTTACGTCATAACAAAATCGA
AAACTTACCAAAAGAATTAGCTGATATCGAATTCAAAAATTTAACAATCG
ACTTGTCAGAAAATCCAATAAACTGTAACTGTACAACGGTGTACATAGTA
GAAAAGACACAAGAAATAAAATACAAAGGGATATGTACACAACAAAACAT
TAAAATAAATGAGCTGAATCACACCATGGTTGATTGTGACCCTTGTTCAA
TAAATAATGGAGGTTGTTCGTTAATCAAGACTTGCATTGCTGAAAATGCT
CTGAATGTAGTATGTATCTGTAATAATGGTTTTACTGGAGATTTCTGTCA
GATATCTCCCACCAACCCTGTACCATGCAAAATAAACAATTGTTTAAATG
GCGGTGTTTGCTTTCACGTTGAAAACACAAACTCTACATTCTGCGAGTGT
GTTTCCACTGACTATAGTGGTGACTTCTGCCAAAACAAAACAAGGAATGA
AACCACTAGAAAAACCACCTTAAGCTTGAACGCTATTACTGCGATTATTG
TCTCCTTATTGGTTTTATTGTTTGTGATAGTTTTCGGTTATTGGTATTGT
GTACATTTGCGTCCGAAACGTAGAAGAATGCGAGAGAGCCGAAAAAAGAA
AGCAAAGAATAGTTTCGATAGTCAAAACAGCATCGTCAATTACTATCTTC
AGATGGGGTTTGATTTTGCGATGCAATATTTGATATTCTTCTTCACTTTC
CTTGGTAATATGCCTTCCTCTGCACAACAAAGCTGTTACATGAACTGCAA
TTGCTCAGGTACAGAGATCTCATGTGACGGTGCACCAAAAGACATTCTCA
ATGGAACCCCTCCCAAAAGCAACATTACGAAACTGATTCTGATCAACATG
GAGTTAGAAAATGATGTGTCATTGATGAAATTCCTGGAGAACCTAACGCA
GCTTCAATATATAGATTTATCATTAAATCAACTGACAGAAATACCGAAGC
TGGATAACTTGGCCACGTTAAACAATTTAGTTTTACGTCATAACAAAATC
GAAAACTTACCAAAAGAATTAGCTGATATCGAATTCAAAAATTTAACAAT
CGACTTGTCAGAAAATCCAATAAACTGTAACTGTACAACGGTGTACATAG
TAGAAAAGACACAAGAAATAAAATACAAAGGGATATGTACACAACAAAAC
ATTAAAATAAATGAGCTGAATCACACCATGGTTGATTGTGACCCTTGTTC
AATAAATAATGGAGGTTGTTCGTTAATCAAGACTTGCATTGCTGAAAATG
CTCTGAATGTAGTATGTATCTGTAATAATGGTTTTACTGGAGATTTCTGT
CAGATATCTCCCACCAACCCTGTACCATGCAAAATAAACAATTGTTTAAA
TGGCGGTGTTTGCTTTCACGTTGAAAACACAAACTCTACATTCTGCGAGT
GTGTTTCCACTGACTATAGTGGTGACTTCTGCCAAAACAAAACAAGGAAT
GAAACCACTAGAAAAACCACCTTAAGCTTGAACGCTATTACTGCGATTAT
TGTCTCCTTATTGGTTTTATTGTTTGTGATAGTTTTCGGTTATTGGTATT
GTGTACATTTGCGTCCGAAACGTAGAAGAATGCGAGAGAGCCGAAAAAAG
AAAGCAAAGAATAGTTTCGATAGTCAAAACAGCATCGTCAATTACTATCT
TCAGAACGAGGGTTACTTTCATGATGAGTCAACTAGCATACCAAATTCAC
CCAAAGAGAACGAGGGTTACTTTCATGATGAGTCAACTAGCATACCAAAT
TCACCCAAAGAGAGCGAAGAGAATTCGTACCCACACGACCCTGCACATAA
CCGTTGGTTGCATGGACGAAGAAGATGTTCTACAATTTTGGAAGAAAAAG
CAAGTCGTGAGGGCAGTTGTATGGATGAAAATGAAAAGAAATAAAGCGAA
GAGAATTCGTACCCACACGACCCTGCACATAACCGTTGGTTGCATGGACG
AAGAAGATGTTCTACAATTTTGGAAGAAAAAGCAAGTCGTGAGGGCAGTT
GTATGGATGAAAATGAAAAGAAATAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000107_pilon | genome | sc0000107_pilon:608459..610294 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1057-1188:133 |
| Aaloc | 1003-1056:437 |
| Aaloc | 1-1002:1837 |
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