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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000089_pilon:101677..105287- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_044083 ID=XLOC_044083|Name=XLOC_044083|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3611bp|location=Sequence derived from alignment at sc0000089_pilon:101677..105287- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCCTTATCGAGCATCCATGATGTGGGTACTCATGGACATGCTGTGAA
TCATCAAAACACTTTAAATCATCATCACCACCACCTTCACCATCATCACC
TACCCCATGCGTTGATTGGGGATGAAAAGGTAGCTATTTGACTCTGCCTT
GTTACTTTTTCTATAAAGCTAGGAAAGCTTTTTATTACGAGTGCCTATTA
ATATTTGAAATTGAAATGGTATAGTTTTCTAAGAATCCATTTTTACCAAA
AATTTTCATTCATCAAAGAAATAGCCATTCTTCCTTTTTCTTGCAGCACT
TTCGACCGAATCCTGACGCTAAACCATTTATTCCAAACCCAATTGCAATC
GCTGCTGCAAATTTCCAATTTGTGAAGGATAAGGTATGTTCTAAGGCTTT
TTTGAATTTTCGATAATGCGCTTTGTGGCATTAAACAAATACTTAATCTT
GTAGAACCACACTAACTTAGTCTATAGTAAGAATTTAAGAATATAATCCT
ATGTATTTTGATATGAAAAGTTTCATATTAAAATCGTAATTTTGTTTTAA
TATTTAAATATTTCTAGAACATCAATAACGTTGTACCTCGTTTTTGGATC
AACCCGAACGGTGAACACCCAGAAAACCTTGTTATTGCTCCTCCACCTTC
TGGTGCAAATCTCTTGAAGAAACAACACATTGCTTTTCATTTGGTCTCCA
ACCTACTGGACGAAGAACTACCAGAAGAAAAAGACCGTGATATTAATGCT
GGTTTCCCTAACTCTCCAAGAATGAATATGTGAGTGTCCATTTATCCTCC
TGATTGATAAGAAATAGATTTTAGTCAACAGTTTAGAATCAACGAACTCA
GTTCTGGTAATTCATGATATGCACCATTGTAGTAATGACTAGTGAAATTA
TGCAACTTTTCTGTTTTTGTTCCACCCAATACGTCACTTTTTCTATTGTT
TAAGCAGGTTTAAGTGACGTATTGGGTAGAAAAGTTCTTAGAAGACTCTC
CAGTGGTGCAAATCATGATATGCATATCAAATTTGATGAGCAGCAATTCT
GGTCAACAAATTTATCCCACGTCAAAGGAAGAAACTTTGGGGTGAATTTA
ATTTGGTGGATGGTGGAAATAGTTTTTAAAAGGCCTGAAATAGCACAAAT
TTGGGTAATGAATAAAATAATTCAAATCTATTTTCTCCCTTGGTAGTTAT
GATCAAAGTATGGAGCATGTTCAAGGATGGCAAACGACCACTGAACCTCT
TAATCTTCCTTTGGAAATGGTCAAAGCCAACGCTGAAAATAAAAGCATCA
ACAACAAATCAATCCATGAAATCTGGTCACCAGACCCTTCTCCAAATGGA
TTGAGTAGTGTTTCACCAACAGAAGAGATCAACCCTTATGTTGGTAACCA
ACAGCAACAACAGAATTCTCAAAGCACCAGTCCTGATAATTCCTTCGATC
AATCTTCAGCAACTGAAATGGAATCTGGTGATCAACAGGTCCCTCAACAA
CTCCCACCACAAGCTTATTCAACCAATGTTTATGAGGACACTGAAGGAGT
GGCTAACCCGGAACCTACCTCCCCCTCACAAATGTATTACCCACCACCTC
CTATCATCCATCAACCTTATGTTTACAGAGGAATGGGTCCGTCCGGGGCG
CACAGGGTTCCGCCGCCAGAAATGTATCCTGTGCATCCAGGGCGTGAGGG
GATGATGACTAGGCCTGTAATCTATGGACCAGGGTACTACGGTCCTCAAG
GACCACCCCAACATAATAGGTATCCGCCATCTCACCACCATTCGAATGAA
GAAATGAGATACAGGCCACGTTACCATAACAACCATCATAACAATAGATA
CCATCATCATAACTCGCATTATCATGGGAACCATCACCACCACCATGAAG
TCTCCTATGAAACCAAAATGTCTTTCTTGGAGGAATTGAGTATTGGGTTA
GACGAATGTCGAGACCAACTTCGACATTTGGAAAGGGATTACAAGAAGGT
GAGCAATCTTTAACGTTTATTAATTTCCATTCAAAATACAACGGATAGAG
AGATATAAACTTTTAAATAGCGAGCTTACGTATGTGTGTTTTCTGCGACG
GGAACGGTTTTGCTTGGGTCATGTCTAGATCCTGATTGACTGCGGACGAC
GGTAAATCACATCTTTACCGTCCTCCATTCTGCCGGTCAGAACTGCGGGT
TTTTCCAAATCGCTTCTTTCACTCCGCCATTTTCAAAAGTGCAAATACAT
TAAAACTTACTAATCTGGCTTATTCTACGGTTTGATTTAATTGTATGATT
ATTTTTCTTTAACCTTAGGCTGATGTGACTTTATCACGTGATTTTCGATT
GCGTAAATCTTCGATGGGCGACACGTCTTCATCAAAATACCCACCCAATT
CAACACGGGTGGACAAACTGATTGCTGATCAAATGAGAGAACATCAAAAG
GTAACAATCTTTTCTTCAAGAAAATGTTTTCTTCAGTCTCAAAACTTTTT
CAAATCTTTATCATTTGAACGATGTAAGACTGCTGGTAGCCTTGGTTTAA
TGGGAGCTAGTTCGGGGCAAATTATGGCTTTTTTGATTAGACTGGATAGT
GTTGATAATTGGCCTTGGTCTTAATTGGCAGATTCTATTCTTGTCTTTGA
TTGAGCACGTATTTAAAAAAAAAAACAGACAGAAAAGCATGACCAGGTGA
CTAATTTTGGGAGGTGCTTATGATACATTTCATCTCTTTGCTGTTTTCAT
GTAAATCTTGAAATCCAAAAGAGAGAAATTTCAAGATGGCAATATCCTCA
CTGAGCTCATTACCATCAACCAACAAGAAGGCAAGGTTCTTCAGAAGCGT
CTCTAGTCTAAATGAGAGTATCCTGCTTGTCTGCTGATCGAAATGCCCAC
GTTAATGGACCATCGTAGCAGAGATTTCCCGTCGCCAATTGTCCTAAGTG
ACGTTATAGGTCATCTGAACTTCTGTAAAGTTTATGCCCTAAAAGACCAG
ATCGTGGAATACAGTAATATTCGATTTTGATAATAAAATTACGTTATTCT
TTTCGTTTGTTTTCAGATTGAATCATTGATTGGGCGTATTGAACGCCTTG
GTTTCACGCCCATGCACCCTAACGTGGGCGTTACCCTTGATTCTTGGTTG
GCTGCAATCAAAGATTTGAGGAATGCGCGGAAGAATGAGGTATCAAATAT
GATGGACACCCCGGGTGTGCAGTATGGTTCCAAATCACATTCACAAGCTG
GTGAGTTGCAAAAAGAATTTACGTAACATTTATACAATTGCTCTACAGGA
GAAAAACTTGTTATAAACAAACAATGGTTTACATTTAGTGTTAAAGTTAA
AGCCTTTCTGTACAAGCAAAAGTTTTTCGCAATTCATGTTCACGTCCAAC
GGAATTCTAAAACTTGCATTTACTTGGCTTTCTTTAAAACTTTTTTAAAT
TATTTCTTATTCGTCATTGTTTTCCCCTTTTAGATGTTTCAAATCTTATC
AAGACAATGAAAGAGGTGAACAAGTTCACGCGGTCCGCTCGCACAGTCGT
TTGGTGCGCCATGCAAATGTTGTACGCTAATTGTACGACTTCTTCACCAA
GCGGTGGCTGA Coding sequence (CDS) from alignment at sc0000089_pilon:101677..105287- >XLOC_044083 ID=XLOC_044083|Name=XLOC_044083|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3348bp|location=Sequence derived from alignment at sc0000089_pilon:101677..105287- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCCTTATCGAGCATCCATGATGTGGGTACTCATGGACATGCTGTGAA
TCATCAAAACACTTTAAATCATCATCACCACCACCTTCACCATCATCACC
TACCCCATGCGTTGATTGGGGATGAAAAGATGGCCTTATCGAGCATCCAT
GATGTGGGTACTCATGGACATGCTGTGAATCATCAAAACACTTTAAATCA
TCATCACCACCACCTTCACCATCATCACCTACCCCATGCGTTGATTGGGG
ATGAAAAGCACTTTCGACCGAATCCTGACGCTAAACCATTTATTCCAAAC
CCAATTGCAATCGCTGCTGCAAATTTCCAATTTGTGAAGGATAAGCACTT
TCGACCGAATCCTGACGCTAAACCATTTATTCCAAACCCAATTGCAATCG
CTGCTGCAAATTTCCAATTTGTGAAGGATAAGAACATCAATAACGTTGTA
CCTCGTTTTTGGATCAACCCGAACGGTGAACACCCAGAAAACCTTGTTAT
TGCTCCTCCACCTTCTGGTGCAAATCTCTTGAAGAAACAACACATTGCTT
TTCATTTGGTCTCCAACCTACTGGACGAAGAACTACCAGAAGAAAAAGAC
CGTGATATTAATGCTGGTTTCCCTAACTCTCCAAGAATGAATATAACATC
AATAACGTTGTACCTCGTTTTTGGATCAACCCGAACGGTGAACACCCAGA
AAACCTTGTTATTGCTCCTCCACCTTCTGGTGCAAATCTCTTGAAGAAAC
AACACATTGCTTTTCATTTGGTCTCCAACCTACTGGACGAAGAACTACCA
GAAGAAAAAGACCGTGATATTAATGCTGGTTTCCCTAACTCTCCAAGAAT
GAATATTTATGATCAAAGTATGGAGCATGTTCAAGGATGGCAAACGACCA
CTGAACCTCTTAATCTTCCTTTGGAAATGGTCAAAGCCAACGCTGAAAAT
AAAAGCATCAACAACAAATCAATCCATGAAATCTGGTCACCAGACCCTTC
TCCAAATGGATTGAGTAGTGTTTCACCAACAGAAGAGATCAACCCTTATG
TTGGTAACCAACAGCAACAACAGAATTCTCAAAGCACCAGTCCTGATAAT
TCCTTCGATCAATCTTCAGCAACTGAAATGGAATCTGGTGATCAACAGGT
CCCTCAACAACTCCCACCACAAGCTTATTCAACCAATGTTTATGAGGACA
CTGAAGGAGTGGCTAACCCGGAACCTACCTCCCCCTCACAAATGTATTAC
CCACCACCTCCTATCATCCATCAACCTTATGTTTACAGAGGAATGGGTCC
GTCCGGGGCGCACAGGGTTCCGCCGCCAGAAATGTATCCTGTGCATCCAG
GGCGTGAGGGGATGATGACTAGGCCTGTAATCTATGGACCAGGGTACTAC
GGTCCTCAAGGACCACCCCAACATAATAGGTATCCGCCATCTCACCACCA
TTCGAATGAAGAAATGAGATACAGGCCACGTTACCATAACAACCATCATA
ACAATAGATACCATCATCATAACTCGCATTATCATGGGAACCATCACCAC
CACCATGAAGTCTCCTATGAAACCAAAATGTCTTTCTTGGAGGAATTGAG
TATTGGGTTAGACGAATGTCGAGACCAACTTCGACATTTGGAAAGGGATT
ACAAGAAGTTATGATCAAAGTATGGAGCATGTTCAAGGATGGCAAACGAC
CACTGAACCTCTTAATCTTCCTTTGGAAATGGTCAAAGCCAACGCTGAAA
ATAAAAGCATCAACAACAAATCAATCCATGAAATCTGGTCACCAGACCCT
TCTCCAAATGGATTGAGTAGTGTTTCACCAACAGAAGAGATCAACCCTTA
TGTTGGTAACCAACAGCAACAACAGAATTCTCAAAGCACCAGTCCTGATA
ATTCCTTCGATCAATCTTCAGCAACTGAAATGGAATCTGGTGATCAACAG
GTCCCTCAACAACTCCCACCACAAGCTTATTCAACCAATGTTTATGAGGA
CACTGAAGGAGTGGCTAACCCGGAACCTACCTCCCCCTCACAAATGTATT
ACCCACCACCTCCTATCATCCATCAACCTTATGTTTACAGAGGAATGGGT
CCGTCCGGGGCGCACAGGGTTCCGCCGCCAGAAATGTATCCTGTGCATCC
AGGGCGTGAGGGGATGATGACTAGGCCTGTAATCTATGGACCAGGGTACT
ACGGTCCTCAAGGACCACCCCAACATAATAGGTATCCGCCATCTCACCAC
CATTCGAATGAAGAAATGAGATACAGGCCACGTTACCATAACAACCATCA
TAACAATAGATACCATCATCATAACTCGCATTATCATGGGAACCATCACC
ACCACCATGAAGTCTCCTATGAAACCAAAATGTCTTTCTTGGAGGAATTG
AGTATTGGGTTAGACGAATGTCGAGACCAACTTCGACATTTGGAAAGGGA
TTACAAGAAGGCTGATGTGACTTTATCACGTGATTTTCGATTGCGTAAAT
CTTCGATGGGCGACACGTCTTCATCAAAATACCCACCCAATTCAACACGG
GTGGACAAACTGATTGCTGATCAAATGAGAGAACATCAAAAGGCTGATGT
GACTTTATCACGTGATTTTCGATTGCGTAAATCTTCGATGGGCGACACGT
CTTCATCAAAATACCCACCCAATTCAACACGGGTGGACAAACTGATTGCT
GATCAAATGAGAGAACATCAAAAGATTGAATCATTGATTGGGCGTATTGA
ACGCCTTGGTTTCACGCCCATGCACCCTAACGTGGGCGTTACCCTTGATT
CTTGGTTGGCTGCAATCAAAGATTTGAGGAATGCGCGGAAGAATGAGGTA
TCAAATATGATGGACACCCCGGGTGTGCAGTATGGTTCCAAATCACATTC
ACAAGCTGATTGAATCATTGATTGGGCGTATTGAACGCCTTGGTTTCACG
CCCATGCACCCTAACGTGGGCGTTACCCTTGATTCTTGGTTGGCTGCAAT
CAAAGATTTGAGGAATGCGCGGAAGAATGAGGTATCAAATATGATGGACA
CCCCGGGTGTGCAGTATGGTTCCAAATCACATTCACAAGCTGATGTTTCA
AATCTTATCAAGACAATGAAAGAGGTGAACAAGTTCACGCGGTCCGCTCG
CACAGTCGTTTGGTGCGCCATGCAAATGTTGTACGCTAATTGTACGACTT
CTTCACCAAGCGGTGGCTGAATGTTTCAAATCTTATCAAGACAATGAAAG
AGGTGAACAAGTTCACGCGGTCCGCTCGCACAGTCGTTTGGTGCGCCATG
CAAATGTTGTACGCTAATTGTACGACTTCTTCACCAAGCGGTGGCTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000089_pilon | genome | sc0000089_pilon:101677..105287 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1549-1674:127 |
| Aaloc | 1363-1545:546 |
| Aaloc | 1231-1362:1294 |
| Aaloc | 430-1230:2415 |
| Aaloc | 217-426:3045 |
| Aaloc | 130-216:3316 |
| Aaloc | 1-129:3612 |
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