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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000089_pilon:837372..839275- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_044060 ID=XLOC_044060|Name=XLOC_044060|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1904bp|location=Sequence derived from alignment at sc0000089_pilon:837372..839275- (Clytia hemisphaerica_ch_hm2_pilon)
GCTTTCCCTCATTCACAAAACAACTGGAAACACACAAATCTGTCCAAGGT
AAGAGTAATTTATATTGTTTATTAAAAGTGTTTTTAGTCTTTTGATATGC
ATGAGTTTTTCGATTAATGTCTGAGTTGTTGGTCTTACTTAAACACGGTT
TCAACCATAAAATATCAGTGATGAGCTTTAATGGTAGCTTCGTCCGAATT
AATTATAATGTTTTTTTCTTTTTTCAGATGAAGTCAGTCCTGATCGCTTT
AGCCTCCATCCTTCTCCTTCAAGCAGTTTCCGCTCGAAGCGCTGCATTAG
ATGCTCCATCCACATGCGAGGATGTTTTGAAGGCTGAAGTAAGAATTTTC
TAATTCTTTCATAAGAATCTTCATGGAAGCTCAATTATTTCTTACCATAT
TTCACCGCGTTCGTATAAACCCATTCCCGTATGAAAAGACCGTATAAAAC
GATGAGGATCAGCCAGTTCAAACTTTCGATTACAAATTACCTTCAAATTT
GCTGTCGTTGTATATGCTAGTGACAGGCTAGCATCGACTGCATTCTAATA
CTTGTAACGTTCTATTTTTTAGACCTGCACCAAGCTCAGAAACTTGGCCA
AGATCTTCCACGAAAATGTTCAAATGGTCAACCAATTGGTCTCCGAAGCC
GTCCAAAAACATCTTTCCAACGCTCAAGACATCATCATGTACGTTCGTGA
CCAATTGATTGCCAAGGCCAACAACTTCAAATGTGAAGATGTTCTCTCTG
CTGATGTAAGTCACATTCTTCATAATAATAGATACAAAGCAACAAGACGA
ACGAAAGCCACATTTTCCTTTAAAAAAGCCTTTTCATTCTCTGATCCATT
GATACCATCACATAAACATATCCTTCTCTTTTTCCCATCGTGTAGCAATG
CACCAAATTGACAGCCATTGCACAAAAATTCAAAGTGTCAGCCGCTGACC
TCATCCAAGACATCAAAGAAGCTGTTGCCGATGGTATCGTCAAAGGACAA
GCTCTTTACCAAAAGACAGTCGAAATCATGTTGGAGAAAATCAACAACTT
CTCCTGTGATCAAGTTATGGATGCTGACGTAAGCGAAACATTCTTTACTA
AAACATTGAATCACCGGCTATACAGGAGTGAGATTTTAATTGATTCATTT
CGAAAAGGTAAACTTTTTATATCTTGAATTTCTCGTTTGCAGACTTGCGC
CAAGATTGAGGATTTCGCCAAGAAAATCCACGCAAACTCCCAAGATGTTA
AGAAAGCTATCATTGATGCTTACGCCAAGGGATTGACCAAAGCTCAAGAC
TTCTTTGATGACGCCAAGGAATTCTTGACCAACGAAATCACCTGTGAAAA
AGTCCTCGGACAAGACGTGAGGATTCTTTTTCTTTGTTTGTTTGTTTGTT
TGGTGGTTTTCATGACCAGAGAATCTGTTGTAAGAATCAACAGCAGAAGA
AGATAAATCTACACGAATGTCTGAAAAATAATCTTAAAAATGTTATGTTT
CTAAATGCAGCCTGTTTACACCACCTGTTCATTTTCTTCACTTTTATCTC
CAGCGATGCGACAAAGTCAAGAAAGTCGCCGAATTATTCGGAGTCAAATT
GAACGAAGTGATGGAGAAATTGAGAGAATTGTATGCTAACGGAGTTCAAA
GAGCCAGTGAATTGTACGTCAAGATTGCTCAATACATCAAAGACCAATGG
TTCGGTTACTCCATCTCCGAAGGTATGCAAACATTATTATTGCAAACTTC
GCAATCAAATTAAAAATTTTTTAAACATTTGAAGAAGTTTTAATGCCAAT
AAGTTTGAAAAATTCACGATTTCTACTTGTCAACCACACCTTGAACAACT
TTTTCTTTTCTCTCTTTTTCAGATGAATTCATGGAACTCATGGACATGTT
GTAA Coding sequence (CDS) from alignment at sc0000089_pilon:837372..839275- >XLOC_044060 ID=XLOC_044060|Name=XLOC_044060|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1800bp|location=Sequence derived from alignment at sc0000089_pilon:837372..839275- (Clytia hemisphaerica_ch_hm2_pilon)
GCTTTCCCTCATTCACAAAACAACTGGAAACACACAAATCTGTCCAAGGC
TTTCCCTCATTCACAAAACAACTGGAAACACACAAATCTGTCCAAGATGA
AGTCAGTCCTGATCGCTTTAGCCTCCATCCTTCTCCTTCAAGCAGTTTCC
GCTCGAAGCGCTGCATTAGATGCTCCATCCACATGCGAGGATGTTTTGAA
GGCTGAAATGAAGTCAGTCCTGATCGCTTTAGCCTCCATCCTTCTCCTTC
AAGCAGTTTCCGCTCGAAGCGCTGCATTAGATGCTCCATCCACATGCGAG
GATGTTTTGAAGGCTGAAACCTGCACCAAGCTCAGAAACTTGGCCAAGAT
CTTCCACGAAAATGTTCAAATGGTCAACCAATTGGTCTCCGAAGCCGTCC
AAAAACATCTTTCCAACGCTCAAGACATCATCATGTACGTTCGTGACCAA
TTGATTGCCAAGGCCAACAACTTCAAATGTGAAGATGTTCTCTCTGCTGA
TACCTGCACCAAGCTCAGAAACTTGGCCAAGATCTTCCACGAAAATGTTC
AAATGGTCAACCAATTGGTCTCCGAAGCCGTCCAAAAACATCTTTCCAAC
GCTCAAGACATCATCATGTACGTTCGTGACCAATTGATTGCCAAGGCCAA
CAACTTCAAATGTGAAGATGTTCTCTCTGCTGATCAATGCACCAAATTGA
CAGCCATTGCACAAAAATTCAAAGTGTCAGCCGCTGACCTCATCCAAGAC
ATCAAAGAAGCTGTTGCCGATGGTATCGTCAAAGGACAAGCTCTTTACCA
AAAGACAGTCGAAATCATGTTGGAGAAAATCAACAACTTCTCCTGTGATC
AAGTTATGGATGCTGACCAATGCACCAAATTGACAGCCATTGCACAAAAA
TTCAAAGTGTCAGCCGCTGACCTCATCCAAGACATCAAAGAAGCTGTTGC
CGATGGTATCGTCAAAGGACAAGCTCTTTACCAAAAGACAGTCGAAATCA
TGTTGGAGAAAATCAACAACTTCTCCTGTGATCAAGTTATGGATGCTGAC
ACTTGCGCCAAGATTGAGGATTTCGCCAAGAAAATCCACGCAAACTCCCA
AGATGTTAAGAAAGCTATCATTGATGCTTACGCCAAGGGATTGACCAAAG
CTCAAGACTTCTTTGATGACGCCAAGGAATTCTTGACCAACGAAATCACC
TGTGAAAAAGTCCTCGGACAAGACACTTGCGCCAAGATTGAGGATTTCGC
CAAGAAAATCCACGCAAACTCCCAAGATGTTAAGAAAGCTATCATTGATG
CTTACGCCAAGGGATTGACCAAAGCTCAAGACTTCTTTGATGACGCCAAG
GAATTCTTGACCAACGAAATCACCTGTGAAAAAGTCCTCGGACAAGACCG
ATGCGACAAAGTCAAGAAAGTCGCCGAATTATTCGGAGTCAAATTGAACG
AAGTGATGGAGAAATTGAGAGAATTGTATGCTAACGGAGTTCAAAGAGCC
AGTGAATTGTACGTCAAGATTGCTCAATACATCAAAGACCAATGGTTCGG
TTACTCCATCTCCGAAGCGATGCGACAAAGTCAAGAAAGTCGCCGAATTA
TTCGGAGTCAAATTGAACGAAGTGATGGAGAAATTGAGAGAATTGTATGC
TAACGGAGTTCAAAGAGCCAGTGAATTGTACGTCAAGATTGCTCAATACA
TCAAAGACCAATGGTTCGGTTACTCCATCTCCGAAGATGAATTCATGGAA
CTCATGGACATGTTGTAAATGAATTCATGGAACTCATGGACATGTTGTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000089_pilon | genome | sc0000089_pilon:837372..839275 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 871-900:31 |
| Aaloc | 700-867:352 |
| Aaloc | 526-699:713 |
| Aaloc | 343-525:1010 |
| Aaloc | 160-342:1333 |
| Aaloc | 49-159:1678 |
| Aaloc | 1-48:1905 |
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