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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000089_pilon:904830..911063- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_044058 ID=XLOC_044058|Name=XLOC_044058|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=6234bp|location=Sequence derived from alignment at sc0000089_pilon:904830..911063- (Clytia hemisphaerica_ch_hm2_pilon)
ATGATAAGATTTGCAGTGGTGCACCGAGCGAAAGATGGCCTTGCATTGTC
TGCTTCAACTGATGTGGACTCAGGGGTTGAGTTGAGAGACAGCAAAAGAT
ATGCCAAAATACTTTCGCGCAAAGCAAGACAGTTTCCTGTTCGATGTACC
ATGACAGTTGGTAGATTCAAGATATAGTATGTACTCTGTTCTTTTCCATG
AACCTTATTGTGCAACCAATATGGGGAAATCTTGAAAGAATGAAACATTT
ATTTTAAAATTCGAAGTCAAAAAAATACATTACTTCAACGGGAAGAATGA
AGGCTTTTTTAGTTAATTGTATAAAGCCTGAAGCAAACTTCTCAGGAGGA
ACAAAATCCCTTAGTATCAAAATCACTGAAAAATTTATAAATATCTCAAA
ATAATACAGATTTTTTCCAATAAACACCTGTATGACAAATTATCAAGGAA
CTTGTTTGATTTCTTGCCTTTTTTGCCAACTTGTTTTCCTCAATTGATTG
GGTGCTGTATTTACTTTTTAATAAACAAGGAGGTTTACTGAAAACCTATT
TCGCCTCTTATTATTCGATTTAAACGATTGAAAAGGAAAATGTATGTCAC
GTGATCTCCCAGAAAAGAAATACCAAAATGCTAAGTTTCATAAAAGAAAG
ATACTGTATCCGCTCTTTATTATTATTAAGTTTCATAAAAGAATTAGGTT
CCAAATTAAGTTCTAAGATTAATATAATTGCTAATAATGAAGATCACATA
AGTGAACCTAGAACTTCATTTCAAAAATGCTTTTCCTGTTTTTTTAGCTT
TACAACAGAAGTTGGTGTATGTTTCTTAATGATTTGTGAGATCAACTTGG
CAGCAGTGTTGGCGTTCAGTTTTGTGGACGAATTGAAGAGAGAGTTCACC
ACACAATACACAAGGGGAGCTGTAGATAAAGCCATTCGACCCTACTCTTT
TATCGCTTTCGGTAAGAGTTTCCTTTCAAGCTTTTTTAGATATATCTGTC
AAGTGAAAAACTTTTTACTAAACTACATGTATAGTATTAGAAAAAAGGTA
GGGGAACCAGTCTTGATAGAGACACTTGGAGATAATTGATCTAATATTAA
AACTTTTTGGATTAAATCCCATTTTTAAGTATATACTGGAAAAATATGGT
TTTTAAAGGTTTTGTTTTTAAATAAGAGTGATACGTCGTTTGTTTACTCG
TCAATTTTTTGACAAGCTTTTTCACATTGGATTGACACGGATGTGGAGCA
AGATTGGTCAGAAAGAGAAAAAAGAAAAACATTTAATTTAGTACTAAATC
GAACACGATAAAACAAAAGGAAACACCGGCCATGATATAAGACATATGCG
TCAAATCTGAAACGGGAAAACGTAAAAAACTTGAAAACAGTTTTCTAGAA
TTATTTCAGCTATTTTAAATCGCGAATAGCCCCCAATTTTCTTGTTGGAC
TTGATTAGGCTTTTCCTCTATGTTTTTTGTTTGCTAAGAGGACAAGGTGA
TAGTCGGTTGTATTTTCAAAAATTGATTTCATTTTGTTTGACAAATTGAA
TTTGGTTTGTTGTTGATCTTCTGTTTCTATGCCCGCCATCTTGTTTATGT
AACGTTGACTGGTCGTGAAGTGAAGTGACCAGTACTCACTTCAGCAATAA
GAACAACTTGAAAAGTCAATGTAAATCTTTTTGAACAATCATTGTGTATA
ATAGGAGGGTTATATCACTCTAAGAGAACTGTCGTTGGTGATGCTCAAGA
TTTGAAGCTTCTTAACAGGGAGGTTTTTTAATGTCCAACCTGGAGATCAC
ATTTGATGGCTTTTGGCTAAACTGGATGTCAATCGCCTACTGAGTTGCCC
ATCAATGTGGAACGCGGGGGAAGGGAAGCCTTCTCACAAAGGCATCAAAA
TCCGACGTTACAAAGATGACGGCAGTTCAATGACTTCAAAAAAGACGAAC
AAATGGTATCTGATCCTTTTTTTGTCAGGGTACTTTTTGCCGCTATCAGT
AGGCACAAGGAATGAGGTTTTAATTAATGAAGAAAACTTTTAATTTTTTT
CATTTTGCAATTTATTTCATGTTGGTTTGACACAGTATAGTAAAATACAA
ATTGATACCAATATAATGAAAAAAAAGTTCAACATTTAAATTTTTTAATC
CTCAAAAATGTTCAACATTCGAATTTCTTGACCCTAGAAAATGTTCAGCA
TTTGAATTTATTGACTTTCAAAGGTTCGTCACTCGCCACAACACGGTTAG
CGGCGGAAGCAGTGAAATCTAATCTGGTGACCGCCTCAATCTCGCATCTT
GCAAACAAGGAGACAAACATTTTGGCCATGTTCAGTGAGATGTACTGTCC
CAAACATTTTCGATTGTTCACTTTCGGTCTTTGGTTGAACGGACCTCCAA
AAGCAATGAAATTTTCTTTGATGTGATCTTGACTTCCGGTGACGCTAAAC
AGATTCGGTAAACGGAAAGTCTCTGGATCTCTTTGTGTTCCGTACGAAAA
ACCGGTCAGAAATGAACCTTTTTTCACCTTGTATCTTCCTTGTAATGAGT
CCAACAGGAAATCCTTCTTGGCTCGTCTGAAGACTTGAGTGACCGGAGGA
AGAAAGCGGAAGACCTCAACCACGAACCGGTCCACCACATCAAACGCTTC
TAATTTTTCGCCCATGTTCTGCCCGTCCATTCGATTGAAGATGTCTACTT
CATTCGAAATCCTCCCTTTTGTACGTTCGTCCAAATTCAAGAAGAGGGGA
ATTGTGGAAGATAAACCGCTTCTTAATGCGAAAGCTGAGAAAACGAAGAC
GAAGAAAAGAGCCTCACTTTTCAAGGTGTCTGCGCTTCGTTTATCTCGCT
TCAAGAGTTTGGGAAGAACGTTCTTCGCCCACGGTGTACTTTCTAGGTAA
GCGTACATTTGATCGGTAACCTGCTGACCCAAAGCATCGAATTTGAGATC
CGGAGTACTCTTCGGTGTTACTCCTTTACTGAACCAGATGAAGAATATTT
TGAGGTCCAAATCGAAAGGTTTATCTAAGAAGAATTCGCTGAGCGTGCGA
ACGGTGACGGCATCAATCAGGTTTTCGACGTTCGTTTGATTGTCTTTGAT
GAGAGGAAGAACGCTTTGCCAGTGTTTCTTCAGCAAGTTGAACAAACCTT
CGTTCCCATACTTCTTTTCTGCGCGTCTTAGAATGCGCCACATGCCTCTC
TTCTTTCGAATTTTCTCAAAACCGTTGGTGGAAGCGGAAGAGAGATAACC
TTTCAAATTGAATGCGTTTACGGTAAACAAGCCGGCGTCCGTCGATTTTT
CTATCAACGTCTTATCGTACATCACTTGGATTGCCACCGGGTCTCCGAGA
ATGATCCGCTCTTCAAACAATTTCAACTTGAAAACTCCCAAACCGCTTTC
CCTTTGCAATTCATGCAAATAAAATGAGCCTTTGATTTGAGCGAGATTTG
CCAGGTTTACCCTTGCATCTGGACTTCCAGCGAAAGGAACTTCTGGATAA
GCCTTCGCTCGGCCGCCCTCTTTGTGTTGATTTTGGCGACCATTTCTATA
AAAGTGATGACTTGAATACCAAGACGCATCATGGAGAGCTTCATGACCTT
CAATGAGAGATAAAATGCTCAAGAACAAGGCCAGCGTTGTTAGTCCTTTC
ATCTTCAAAATGAATTGAACGAACAAATCAATATCAAGATGTTCTATCAT
TGTATAAATAGTTTTTTAACAACCGGAAATGGCCAAACCGAGAATTGTAG
ATCATATTTCCTGAATAAAAAAACATCCTTTTTAAACGTCCAATTTGCAG
ACCATTGCTCATTAAATGTTATGTAAACAACCATCATATATTTCACATTA
AATCATGCAAACCTAGAACAGTTCCAGTAATAATGCCAACGTTCTATTTT
TATTTCAGCCATTGATTTTCATTCAACCCGATTCGTCCTACAGTTATCTT
TGTCATAGCATTTTGTCATCTCATATTAGACCAACAAATTATTAACTTGC
TTGTTTTGATGCGAAGATTTATTTATGCACTTTGAATTGCCAACCCTCTT
TTTAAGCATGTGTAGATTGACAAACCCCATTCATGATCATGCGCAGTAAA
CGTTTTGTCCGTTTCTTTTTTCAGACAGTTTCATTCAGAAGACGAAAACA
AAGTACAACAACACACGAACACTTTACACCAGAATCGACCTCACAGACAT
CAGTGAAGAACTGAAAAATAATCCTCCTTATGAAATCACCGAAAAAGATT
TGAATTCGTCTGCAGCGGGAGTTGGAGGGGGTGTCATCCAAAACTCCGTT
TCGAATGCCGCGAAAAATATCCTGAAAGCAACTTCAAATGGCAGTGCTAC
ACACATCCTGCGTGAGTTCTTCAAATAGCTATCATTGATCAACGTATGTG
CAGCATTTAGATCTCTTTCCACTCGCTTACTACAATCAGGGTCGAAATAT
ATTGGGAATTTAGGTTAGGAATTTTAATTCCTCGTTTTCAGCAATTTAAA
GTTCGGGTGAAAAAGTCGCTTTTGGGCAAATTGATATATTTGTTCGAATA
TTTTAATTTGGGAGGGGTTTATAGACTTCCAGGTTATATTCTGAACCCTA
TTGGACCATTCTTGGACTTTTAGTTCTTTAGTAATTAAGTCTAGCGTTAA
AACTCAGAGTTAAAACTCCACCCGTCCAACCTAATTTAGAGCGCTTCCAA
ATCGTTTTTGGTTGTAAAGTTTCGTGGAAATTTACCTTTTTTTCAATTAT
TATGACTTTGATTGTATCTACCCAAGAATATATTATCACGATCTCGTTAC
CTCTTTTTACTTTTCAGCTCCAAAATTCAAGATGGATGCGATGACAACGA
GTAATTATGTGGCGGTGATGGTCTGTTTACTGTGTGGTATCATGAATATC
GTTCGTTTGGTCCCATTCCTCTCACAAGTCGACATGGAGGATGAGGTCCG
TCCCTTTTTTATCCTTTACACGCTTTTTTTATAAGAATACACTTTATAAG
AATGTCCACGATGAAAATGGCCGAAAAATTAAGAATATGGTAAGAATATC
ACCATCATGGAATTTAGCAACTTAACTTAAGAATGCCATTTTTAATGCAT
TTTAACCTGTAGATTGCCAATTTCGATCTTAACCTAAGAATACCGTAAGA
ATATTTTTGGATGATTTTCGTCAAAAAGTTTAGAATATCCATGATGAAAT
GAAAAAAACACCATTCTTATAAAAAAAAGCATGTATTCTAGAAAGTATCT
CAGCTTGAAAATGTTTATTAGCGCATTTGCGGAATTTTTGGCTCATTTTT
AACTGAAGAAAGATGAAGATGATGCCATTCTTCTGACGAGGGAAATATTT
AACATGTCTCTTTTTTTTTGTTTTGCAGACACATTGGTTATCGATCAGTT
TTGCGTTCTTCACTTCAGCAGTTATCAACTTCTTACAGGTAATCACGATC
AGTCAATTAACTAAGAGATGGTAGAAAGAATATGTACAGGATGATCTAGT
GTCACCTTGCCTAACTCGATCCTTTTAGTCTTCCCATTCCGACCTGTGCA
TAGTTTTGTGTTTGTTTTTAGTTTGTGGTTGAAAGTTATGTCAGTTAGGA
ACAGAGAGCTTGTTTGAGATTTGGTTGAATCAGTCTATTCCTGTAAATTC
TGCTAAATTTGAATTTGCATTTTTCTATTATTTTCAGTGTTATGTTTTAT
ATTCACCAATTCAAAGAAAGAGCATTGCAAACGTTGGCTGTTTCTTGACT
AGTCTGATATCGCTTTATTATTTATTCGACTTGCGAAATATTTATCAGGT
CCTTTTCCACTTCTCTGCTTCACTCTTCATGGCATTCAATATTTGGAAGA
GACCCATCCTCGGAAAGCTTCCCAATTATAACGTATGATGCTGCTCCAAG
TGTTTACGATTTAATCTGAACAAGATTGGAAAGGTTATTTCGTTCTCTCG
AAAGGAACAGGAATGCTACTAATAATACTTTAATTATCGGCTCAAGCGAA
GGGATTGTTTTTTATGATTATGTTGGTGCTGGAGAAGATATTTTGTTGTT
ACGTCGAACAGACCAAGAAAGTGGGAGGTTCAAACTTGAGAACTTTAAAG
ACAAACGGATCATGGTCATAAACAGAGAAAGAAGTTTGCTTATTGCTTCT
GATCAAAACAAATTGAACTTTGGGTTTATAGGTTTTTGGTGTACCTACTA
TGACGATACTGATTGTTTAGGTAATTTATTTAAA Coding sequence (CDS) from alignment at sc0000089_pilon:904830..911063- >XLOC_044058 ID=XLOC_044058|Name=XLOC_044058|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2322bp|location=Sequence derived from alignment at sc0000089_pilon:904830..911063- (Clytia hemisphaerica_ch_hm2_pilon)
ATGATAAGATTTGCAGTGGTGCACCGAGCGAAAGATGGCCTTGCATTGTC
TGCTTCAACTGATGTGGACTCAGGGGTTGAGTTGAGAGACAGCAAAAGAT
ATGCCAAAATACTTTCGCGCAAAGCAAGACAGTTTCCTGTTCGATGTACC
ATGACAGTTGGTAGATTCAAGATATAATGATAAGATTTGCAGTGGTGCAC
CGAGCGAAAGATGGCCTTGCATTGTCTGCTTCAACTGATGTGGACTCAGG
GGTTGAGTTGAGAGACAGCAAAAGATATGCCAAAATACTTTCGCGCAAAG
CAAGACAGTTTCCTGTTCGATGTACCATGACAGTTGGTAGATTCAAGATA
TACTTTACAACAGAAGTTGGTGTATGTTTCTTAATGATTTGTGAGATCAA
CTTGGCAGCAGTGTTGGCGTTCAGTTTTGTGGACGAATTGAAGAGAGAGT
TCACCACACAATACACAAGGGGAGCTGTAGATAAAGCCATTCGACCCTAC
TCTTTTATCGCTTTCGCTTTACAACAGAAGTTGGTGTATGTTTCTTAATG
ATTTGTGAGATCAACTTGGCAGCAGTGTTGGCGTTCAGTTTTGTGGACGA
ATTGAAGAGAGAGTTCACCACACAATACACAAGGGGAGCTGTAGATAAAG
CCATTCGACCCTACTCTTTTATCGCTTTCGACAGTTTCATTCAGAAGACG
AAAACAAAGTACAACAACACACGAACACTTTACACCAGAATCGACCTCAC
AGACATCAGTGAAGAACTGAAAAATAATCCTCCTTATGAAATCACCGAAA
AAGATTTGAATTCGTCTGCAGCGGGAGTTGGAGGGGGTGTCATCCAAAAC
TCCGTTTCGAATGCCGCGAAAAATATCCTGAAAGCAACTTCAAATGGCAG
TGCTACACACATCCTGCACAGTTTCATTCAGAAGACGAAAACAAAGTACA
ACAACACACGAACACTTTACACCAGAATCGACCTCACAGACATCAGTGAA
GAACTGAAAAATAATCCTCCTTATGAAATCACCGAAAAAGATTTGAATTC
GTCTGCAGCGGGAGTTGGAGGGGGTGTCATCCAAAACTCCGTTTCGAATG
CCGCGAAAAATATCCTGAAAGCAACTTCAAATGGCAGTGCTACACACATC
CTGCCTCCAAAATTCAAGATGGATGCGATGACAACGAGTAATTATGTGGC
GGTGATGGTCTGTTTACTGTGTGGTATCATGAATATCGTTCGTTTGGTCC
CATTCCTCTCACAAGTCGACATGGAGGATGAGCTCCAAAATTCAAGATGG
ATGCGATGACAACGAGTAATTATGTGGCGGTGATGGTCTGTTTACTGTGT
GGTATCATGAATATCGTTCGTTTGGTCCCATTCCTCTCACAAGTCGACAT
GGAGGATGAGACACATTGGTTATCGATCAGTTTTGCGTTCTTCACTTCAG
CAGTTATCAACTTCTTACAGACACATTGGTTATCGATCAGTTTTGCGTTC
TTCACTTCAGCAGTTATCAACTTCTTACAGTGTTATGTTTTATATTCACC
AATTCAAAGAAAGAGCATTGCAAACGTTGGCTGTTTCTTGACTAGTCTGA
TATCGCTTTATTATTTATTCGACTTGCGAAATATTTATCAGGTCCTTTTC
CACTTCTCTGCTTCACTCTTCATGGCATTCAATATTTGGAAGAGACCCAT
CCTCGTGTTATGTTTTATATTCACCAATTCAAAGAAAGAGCATTGCAAAC
GTTGGCTGTTTCTTGACTAGTCTGATATCGCTTTATTATTTATTCGACTT
GCGAAATATTTATCAGGTCCTTTTCCACTTCTCTGCTTCACTCTTCATGG
CATTCAATATTTGGAAGAGACCCATCCTCGATGATTATGTTGGTGCTGGA
GAAGATATTTTGTTGTTACGTCGAACAGACCAAGAAAGTGGGAGGTTCAA
ACTTGAGAACTTTAAAGACAAACGGATCATGGTCATAAACAGAGAAAGAA
GTTTGCTTATTGCTTCTGATCAAAACAAATTGAACTTTGGGTTTATAGGT
TTTTGGTGTACCTACTATGACGATACTGATTGTTTAGGTAATTTATTTAA
AATGATTATGTTGGTGCTGGAGAAGATATTTTGTTGTTACGTCGAACAGA
CCAAGAAAGTGGGAGGTTCAAACTTGAGAACTTTAAAGACAAACGGATCA
TGGTCATAAACAGAGAAAGAAGTTTGCTTATTGCTTCTGATCAAAACAAA
TTGAACTTTGGGTTTATAGGTTTTTGGTGTACCTACTATGACGATACTGA
TTGTTTAGGTAATTTATTTAAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000089_pilon | genome | sc0000089_pilon:904830..911063 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1138-1164:28 |
| Aaloc | 943-1134:220 |
| Aaloc | 766-939:548 |
| Aaloc | 706-765:857 |
| Aaloc | 580-705:1416 |
| Aaloc | 343-576:2109 |
| Aaloc | 178-339:5437 |
| Aaloc | 1-174:6235 |
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