|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000101_pilon:76304..81805+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_044052 ID=XLOC_044052|Name=XLOC_044052|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5502bp|location=Sequence derived from alignment at sc0000101_pilon:76304..81805+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTTGAAGTTTGCCGTTCTTGCTGGTCTTATGACCCTCACTCTCGCTTT
TGGTAGGTTATTTTCAAACCTCGCACTTAATTGTGATACATTTTCCTTTT
ATGAGTGCTACGAGCTTGGTTCTTATTGATATCTTAGTTAAGATTACCGA
CGAGCTCACGGAATTGGGAGGGAGTGTTAATTAAAGAGCTCTAAAAAACA
ATGGTTGTAGCTAAGAATGATTCTTTCTTCTCCTGATTTGGTTCTATTCC
GATCTTTGCCATCAGTAAATTATGTCCCTGTGTTAGATTATCATCATATA
GAGCAGCTGTAAAAATCACAAACCTCCTCTAAAAAATCACAGGTAGTATG
AAGAGAACAGAGGCTTCCAGAAGCCTAAGCGATTGTGTTCTAAAATACAT
ATATCAACCATTACACCATAATGGGAATGGGACAGGCTTTCCAAGGGCGG
AATGGCGTTCAATTGTTTGTATCCTTTAGATGTCAATGCTCGGAACTATC
GTTAGATTCGAACCCAATTCTCTGATTAACGGTCTACAATATTTATCTTG
CAGATTGTGGTAACGAAATTAGCATTCAAAAAGTTGGATGTTTCAAAAGA
AGCCAATCAGTTTTCCCTGATATGATCGCCAACAACCGTGACTCATCACA
CGCTTCTTACATTGGTCAAGAAATTGATTGGAGCAACTTTGGAAATTCTA
TGAAAAGGTtagaatgtttttcaaaatggaaaaCATAGCTTAAGTTTCTA
AGGTTTGACATTATTTCACAATGCTTGGATCTCTCGAATATCAACTTATT
CTCTGAGACTGACATGGAAATACTACtgaaataccttatcggggaaaact
tcgtcggggaaaagtgacgaaattttggccaaatgacgaatatttttccc
cgataaggtaaaacattttttgcaatatatAATTAAATCTGTTATCCGTT
GAAAATcttatgaaaatattaaaaatcatttgatttttagtATGATGAAA
CACGCAAGTGATTGGACAAaactttactttatttttttccagcCTTGCAT
GTCAATGCTCGCAAGCCGCCAAAGAAGGTGGTTATGTCGCCTTTGCTCTT
GGTTTCTATGGAGAATGTTTCGCTGGCAAAGACCAAAAAGCTTTGGATGA
CTTATTGATCGACCCAGCACAAAGCAGCAGTGCCTGTATTAACAAGAATT
ACGGTAAATGCCAAGTAGGAGAGAATTGCATCGGAGAAGCCAACGCTGAA
TACATTTACACCTTTGCTTCACAAGCACCACCAAGTAAGTAGTAAAATCA
atgaaatcttaaaatattaATGCAGACTTTTGATTTAGCATTCAACTGAT
GTAAAATGTACTTATGGTTGATTGCAACCAGAGGAATGtgaagagatgga
aaaacagcttttctgattactcaaagtttaacgatcacttctattgaaaa
ttctattgtacaAACGtcgattaggtcattaaataaaagtccagaaaaga
cggctcgccatacaaattggacggtttctacatgatttgacgataaaaat
gaaaatttgtttttcctttttcgacgattactagttcaatttttaagaat
aaggagcaatttttttaccaacttatagcaaaagaaattcttaacacaat
gatattaaattgattcttgtaaaactgtcagaaatcgagtaaaatcaaga
taaagttataattttctcgagctctagctctACATAtaatggtgcggtca
tgatgcggttaaaTCAGTAGAATCACTAGGAAATTTTGAGCAAGAAGATA
TTGGCACCTTTTTGTATAGGAGAgatgtacccaaaatataagccctaaag
gtttgcgcataatcaggcttgaaacaaaagaactttgtcacaacacgcta
ataatgcaattttttatagcgacaacaaaagaaacctatttactcgacat
aaactcccttacgggcaagagacctggtatatgacgagccgtttttccat
tgttttcaagaggctgtttttccatctctttacattcctctgttgAAATT
GAGCAACTAACTTTGCGGGATTACGAGATTATTATCTTATGGAATGTGTA
TTTTTGTCCcctgttttaaaggttttgtttatacttaagtgttcccgttt
catatcagacacatttcatatcaggacagtgtctccctattgttgtattg
tgctgatataaacaagaaatgtttttcttttcccctTTCTGACCAAAATG
CTCCGAAAAAgcgtgaattaaaattgatgagtgagcaaaatatatcactc
ttatttaaaaacaaaatctttaaagtgGGTACATGTCAAAGGATGGGATT
CATTTCTTTGCTTCTTTTGACAGAGGTCGATGGAGGACTTTCTAAATGGT
CAGAATTCACCGAATGCTCAGCTTCCTGTGGAGAAGGAGCAAAATTCCGT
GAACGTTCGTGTACCAACCCACTCCCTCAAAATGGTGGTGCTAGCTGTGA
AGCTCTCGGTGAATTGAGTGAATCACAAGCATGTAAAATCAAGGAATGTC
CAGGTAATTACATACTTCCTTTAATCAATTGTTTCAGCCGCAGAAATCCT
GTGCTGTAGTCTGATGAGAACCTATCAAAATCTGTACGAGGTTATGCTAT
GTTATACGTTAGTTTTAGACTTTTCACTATGAAAGTCAAGCATAATTTCA
TAATCGTCCAATGTCATACAGAAACCCGCGACTTAGAAACAGAATTCTGA
CACAGTTAGGTTAGAGAAATTGCAACTCTTCAAATTAGTTACacagaaaa
agtaacaaaaggAATGTTTGATACGTTTCCTAGTCAATGGTCAATACGGA
GCCTGGTCAGCATACAGTCAATGTAGCAAGTCTTGTGGAGGtggaaatca
aaagaaaacaagaaagtGTGACAGCCCAGCACCAGCCCATGGAGGAGCTG
AATGTGAAGGACCAGCTGAAGATCAAAGACCTTGCAACACTCAAGCTTGC
CCAGGTTAGTTAGTTGCTCAGCTAGTAAGCAGTCATTCACAAAATTTAGT
GAGAAATAGAATACTTACTGCAACgtttataactttttttcttcgttATC
CGATTCTCTGATCAAACTTAGTCTCATTCTTAATCAAGCgatcataaaat
gaaaatatagccCTTAACATAAAGAGACAATTCTGCAGTTGATTCTCACT
AATTCTGACAAGAAAGGGAAGTCTAACAAGTACGAAATACTGTGAGATTT
GACACAATTTCAGAAAGTATCTGAAGTTTGGTCATCGAAAAGATTGCTGT
GAAGAAGGTTATACCAGAACGAATGCagaatagaaaaaatataaGATTGG
CTTCATTTGTTTTAGTCAATGGTCAATACGGAGCCTGGTCAGCATACAGT
CAATGTAGCAAGTCTTGTGGAGgtggtaaacaaaagaaaacaagaaaatg
tgACAGCCCAGCACCAGCCCATGGAGGAGCTGAATGCGAAGGACCAGCTG
AAGACGAAAGAGCTTGCAATACTCAAGCTTGCCCAGGTTAGTCAGTTGCT
CAGTTAAAAGACAAGAACATTCTTAAGCCGTATATAGCAAAGTAACTGGT
GTCAATTCTTATCTCaataataattataatattCTAGAATAAGTCCGATC
CTGGTTGCAGGCTTGATTCTAACCACATCATAAAATGCAAGTAAAGTAAG
CACATCAGTATTGCAGTTTGCAAGTGAGAAATATCATGGGAGTCTTGCAA
AGCAAAGTCTCTTAATTCATGAAAGTTTATAAGTGGCATTCAGACAGGGT
TGGTGTGAAATATTTGATCAGTAATAAAAGATTATAAcagaaaacataaa
atatcgTTTGTCCATTTTAGTCAATGGCAAATACGGAGCCTGGTCAGCAT
ACAGTCAATGTAGCAAGTCTTGTGGAGGcggtaaacaaaagaaaacaaga
aaatgtgACAGCCCAGCACCAGCCCATGGAGGAGCTGCCTGTGAAGGACC
AGCTGAAGATGAAAGAGCTTGCAACACTAATGGATGTCCAGGTAAAAAGA
GTCTTTTGTATCCAGAAACATTTTAAACATGATAAAAGAGTATCTGTCAA
TGAACTTTCTTCTAACTCCGAAACCTTTGCCTACGCCTAATGCTCGACCA
CAGGAGCCAGGGGAGAGGCTTGCGTTATCTAACGTCAAAAAGGCTTACCA
CCTTTCGTACGACGTTATAGTTTATTTTAGACTATTCACTATGAAAGTCA
AGTACAATAAACCTTTTTCCGTAGTTAACGGTAAATGGGGAAGTTATGGA
AGCTACGGTAGTTGCAGCAAAACATGTGGAGGAGGAAGCAAATCTCGATC
ACGATCATGCAACAACCCTGCACCAAAGAATGGAGGTAGTCAATGCAGTG
GCTCTGCTACACAATCTGCAACATGCAACACACAAGCTTGCTTGAGTAAG
TGAAATTAAATAAGTTCATTATCTCGTTGGTTTAGAAATTCTAAGATCtt
actttatttttccattggATACTTTTTAAACAGCTCTGAATCGAATCATA
CACCCCTGAACTTAGCGAGGGATTTAGGTATCTCAGACTCAACGTTTTAG
AGCTTTAATTGACTAAAGTTAGCGTGTTCAGAACTCTTCCATGCTAATCT
TAATCAAGAAATCATTTTGTGTTACAGAGAGCAACTTATGTTCCTGGTAT
TACACTCCATTCAACACTGAGAAGAAAGGAAGACCAGTCTACTTGGACAG
ACACTCACTCCACTGCCCATCCGGATACGTTATGAACTATATTAAATTAC
AACGAAACTCCGGACACACCCAAATACGTTACAAATACAAATGTTGCCGA
TCTCAACTCACTTGCTCAGACAGCCGACGAACCAATGGACAATCGTACAA
TGGAGGTGGTGAAGGAAATACTGTCTACTTGGACCGTCAAACTAACAACT
GTTACAACAAAGGTAATATATTCTCAAGCTCAAAACATAATCCCTCAAAG
TTGATTCTTTGCCAATTATTATATTGCAATAGCAACATCACCATGTTTCT
AGCTGGCCTCATTCTCAAACAACTACACATCTATGCACGAGaaaaaaaGT
AGATATTGCACTTGCAGTTATCAtgccaaagatttccaaaagtttttttc
ataaatgCAGATCATGCCCAGATCATGTTAACTTTTTCAAATCTATTTCT
TTTCTCACACGTCACTTTTACTTTCAGGTTTCAGTTACTTGAAATTAGAC
CGTAGCGGAACCAACTGGAACTACAAATATGATTGCTGCAGCGTACCAAG
TGGATCAGTCTCATGTTACGACACCAACACTGGATACAATGACGATGGTG
ACGGCAAAGTTGTCTATCTTGACAGACATACTATGTCCTGCAACACTAAC
TATTACATCACATACTTCAAATTGGTACGAAACTCTTCACACAACAAATA
CAAATACGATTACCGATGCTGTAAACTTAACGCACCCGCTGTCACTAACT
AA Coding sequence (CDS) from alignment at sc0000101_pilon:76304..81805+ >XLOC_044052 ID=XLOC_044052|Name=XLOC_044052|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3744bp|location=Sequence derived from alignment at sc0000101_pilon:76304..81805+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTTGAAGTTTGCCGTTCTTGCTGGTCTTATGACCCTCACTCTCGCTTT
TGATGTTGAAGTTTGCCGTTCTTGCTGGTCTTATGACCCTCACTCTCGCT
TTTGATTGTGGTAACGAAATTAGCATTCAAAAAGTTGGATGTTTCAAAAG
AAGCCAATCAGTTTTCCCTGATATGATCGCCAACAACCGTGACTCATCAC
ACGCTTCTTACATTGGTCAAGAAATTGATTGGAGCAACTTTGGAAATTCT
ATGAAAAGATTGTGGTAACGAAATTAGCATTCAAAAAGTTGGATGTTTCA
AAAGAAGCCAATCAGTTTTCCCTGATATGATCGCCAACAACCGTGACTCA
TCACACGCTTCTTACATTGGTCAAGAAATTGATTGGAGCAACTTTGGAAA
TTCTATGAAAAGcCTTGCATGTCAATGCTCGCAAGCCGCCAAAGAAGGTG
GTTATGTCGCCTTTGCTCTTGGTTTCTATGGAGAATGTTTCGCTGGCAAA
GACCAAAAAGCTTTGGATGACTTATTGATCGACCCAGCACAAAGCAGCAG
TGCCTGTATTAACAAGAATTACGGTAAATGCCAAGTAGGAGAGAATTGCA
TCGGAGAAGCCAACGCTGAATACATTTACACCTTTGCTTCACAAGCACCA
CCAAcCTTGCATGTCAATGCTCGCAAGCCGCCAAAGAAGGTGGTTATGTC
GCCTTTGCTCTTGGTTTCTATGGAGAATGTTTCGCTGGCAAAGACCAAAA
AGCTTTGGATGACTTATTGATCGACCCAGCACAAAGCAGCAGTGCCTGTA
TTAACAAGAATTACGGTAAATGCCAAGTAGGAGAGAATTGCATCGGAGAA
GCCAACGCTGAATACATTTACACCTTTGCTTCACAAGCACCACCAAAGGT
CGATGGAGGACTTTCTAAATGGTCAGAATTCACCGAATGCTCAGCTTCCT
GTGGAGAAGGAGCAAAATTCCGTGAACGTTCGTGTACCAACCCACTCCCT
CAAAATGGTGGTGCTAGCTGTGAAGCTCTCGGTGAATTGAGTGAATCACA
AGCATGTAAAATCAAGGAATGTCCAGAGGTCGATGGAGGACTTTCTAAAT
GGTCAGAATTCACCGAATGCTCAGCTTCCTGTGGAGAAGGAGCAAAATTC
CGTGAACGTTCGTGTACCAACCCACTCCCTCAAAATGGTGGTGCTAGCTG
TGAAGCTCTCGGTGAATTGAGTGAATCACAAGCATGTAAAATCAAGGAAT
GTCCAGTCAATGGTCAATACGGAGCCTGGTCAGCATACAGTCAATGTAGC
AAGTCTTGTGGAGGtggaaatcaaaagaaaacaagaaagtGTGACAGCCC
AGCACCAGCCCATGGAGGAGCTGAATGTGAAGGACCAGCTGAAGATCAAA
GACCTTGCAACACTCAAGCTTGCCCAGTCAATGGTCAATACGGAGCCTGG
TCAGCATACAGTCAATGTAGCAAGTCTTGTGGAGGtggaaatcaaaagaa
aacaagaaagtGTGACAGCCCAGCACCAGCCCATGGAGGAGCTGAATGTG
AAGGACCAGCTGAAGATCAAAGACCTTGCAACACTCAAGCTTGCCCAGTC
AATGGTCAATACGGAGCCTGGTCAGCATACAGTCAATGTAGCAAGTCTTG
TGGAGgtggtaaacaaaagaaaacaagaaaatgtgACAGCCCAGCACCAG
CCCATGGAGGAGCTGAATGCGAAGGACCAGCTGAAGACGAAAGAGCTTGC
AATACTCAAGCTTGCCCAGTCAATGGTCAATACGGAGCCTGGTCAGCATA
CAGTCAATGTAGCAAGTCTTGTGGAGgtggtaaacaaaagaaaacaagaa
aatgtgACAGCCCAGCACCAGCCCATGGAGGAGCTGAATGCGAAGGACCA
GCTGAAGACGAAAGAGCTTGCAATACTCAAGCTTGCCCAGTCAATGGCAA
ATACGGAGCCTGGTCAGCATACAGTCAATGTAGCAAGTCTTGTGGAGGcg
gtaaacaaaagaaaacaagaaaatgtgACAGCCCAGCACCAGCCCATGGA
GGAGCTGCCTGTGAAGGACCAGCTGAAGATGAAAGAGCTTGCAACACTAA
TGGATGTCCAGTCAATGGCAAATACGGAGCCTGGTCAGCATACAGTCAAT
GTAGCAAGTCTTGTGGAGGcggtaaacaaaagaaaacaagaaaatgtgAC
AGCCCAGCACCAGCCCATGGAGGAGCTGCCTGTGAAGGACCAGCTGAAGA
TGAAAGAGCTTGCAACACTAATGGATGTCCAGTTAACGGTAAATGGGGAA
GTTATGGAAGCTACGGTAGTTGCAGCAAAACATGTGGAGGAGGAAGCAAA
TCTCGATCACGATCATGCAACAACCCTGCACCAAAGAATGGAGGTAGTCA
ATGCAGTGGCTCTGCTACACAATCTGCAACATGCAACACACAAGCTTGCT
TGATTAACGGTAAATGGGGAAGTTATGGAAGCTACGGTAGTTGCAGCAAA
ACATGTGGAGGAGGAAGCAAATCTCGATCACGATCATGCAACAACCCTGC
ACCAAAGAATGGAGGTAGTCAATGCAGTGGCTCTGCTACACAATCTGCAA
CATGCAACACACAAGCTTGCTTGAAGAGCAACTTATGTTCCTGGTATTAC
ACTCCATTCAACACTGAGAAGAAAGGAAGACCAGTCTACTTGGACAGACA
CTCACTCCACTGCCCATCCGGATACGTTATGAACTATATTAAATTACAAC
GAAACTCCGGACACACCCAAATACGTTACAAATACAAATGTTGCCGATCT
CAACTCACTTGCTCAGACAGCCGACGAACCAATGGACAATCGTACAATGG
AGGTGGTGAAGGAAATACTGTCTACTTGGACCGTCAAACTAACAACTGTT
ACAACAAAGAGAGCAACTTATGTTCCTGGTATTACACTCCATTCAACACT
GAGAAGAAAGGAAGACCAGTCTACTTGGACAGACACTCACTCCACTGCCC
ATCCGGATACGTTATGAACTATATTAAATTACAACGAAACTCCGGACACA
CCCAAATACGTTACAAATACAAATGTTGCCGATCTCAACTCACTTGCTCA
GACAGCCGACGAACCAATGGACAATCGTACAATGGAGGTGGTGAAGGAAA
TACTGTCTACTTGGACCGTCAAACTAACAACTGTTACAACAAAGGTTTCA
GTTACTTGAAATTAGACCGTAGCGGAACCAACTGGAACTACAAATATGAT
TGCTGCAGCGTACCAAGTGGATCAGTCTCATGTTACGACACCAACACTGG
ATACAATGACGATGGTGACGGCAAAGTTGTCTATCTTGACAGACATACTA
TGTCCTGCAACACTAACTATTACATCACATACTTCAAATTGGTACGAAAC
TCTTCACACAACAAATACAAATACGATTACCGATGCTGTAAACTTAACGC
ACCCGCTGTCACTAACTAAGTTTCAGTTACTTGAAATTAGACCGTAGCGG
AACCAACTGGAACTACAAATATGATTGCTGCAGCGTACCAAGTGGATCAG
TCTCATGTTACGACACCAACACTGGATACAATGACGATGGTGACGGCAAA
GTTGTCTATCTTGACAGACATACTATGTCCTGCAACACTAACTATTACAT
CACATACTTCAAATTGGTACGAAACTCTTCACACAACAAATACAAATACG
ATTACCGATGCTGTAAACTTAACGCACCCGCTGTCACTAACTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000101_pilon | genome | sc0000101_pilon:76304..81805 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1600-1872:5230 |
| Aaloc | 1315-1596:4680 |
| Aaloc | 1144-1311:4277 |
| Aaloc | 973-1140:3873 |
| Aaloc | 802-969:3368 |
| Aaloc | 631-798:2836 |
| Aaloc | 451-627:2376 |
| Aaloc | 208-447:1044 |
| Aaloc | 55-204:556 |
| Aaloc | 1-51:1 |
|
