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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000061_pilon:140774..143155+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_044023 ID=XLOC_044023|Name=XLOC_044023|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2382bp|location=Sequence derived from alignment at sc0000061_pilon:140774..143155+ (Clytia hemisphaerica_ch_hm2_pilon)
atgaattttgaaattggaaaTGTGTCGATTAAACTTCTGGTGAAAGTTGG
ATCTGAGGAATCAACCGATCCTTTCAAATTATCTTTtaatatcaaattta
ataacAAAGAAATTGGCTCATTTCAAAtcaccttggAaaattttgatacC
AGTTTGGAACTCAGAGATTTGGGTAAAAATAGTATATTATTTAAACCAAG
CAATGAAACTTGTGAGAAAAAGGTTAATATTGAGTcgaccgaaaaaaaat
tacaacaAACTTGTGACAATGAACAAGAGGAAGATAGTCCTTTGGTTGAA
GAttgtcaaaagaaaagtgaacGAGAGCTTCGGAAAGGATCTCCTAAGAA
TTATAGAGGAGATGCTGAAAATTATTTAGAAGGAAAACAAGATTACaaaa
ataagaccccacaaacaatgaaaactgaaaagaaagcagggaaaataaaa
aaattcgaatgtgATGATTGTGGGGTGCGGTTTGCATCAAACTCAAAGCT
CAAAATTCATCATGATTCAGTTCATAAGAAATTGAAACCATTTGAATGCA
CTGAATGTGGTAAAAAATTTGGCAGGAAAGACTATCTTGTTTCTCATCTT
AAGATTCACACAAAAGATAAACCAATTCAGAGTCAAGTTTGTGGTGAAAG
ATTTTCACAGAAATCTAATTTGGTTTTCAATGACAAGAGCACTTACGAAG
ATTCTGTAACATCAAATGAAGATGACACTTCCCTTCCTACATTCACTGGT
TTTAATGAAAACCAAAACGATGGACAATCTATGATTGTTAATGAATAACA
gcttttgaaagaaagtttgttttgatattcagGGGATTTAAAACAATATT
GAAGTAGACACTTTGGTATTATGAGAAACAGCTGTGAAGAATAAACTAAA
TACCTTCTATACAAATTATGTCAATCATAATACTTGTATAATTAAAAGAT
AACTTACTGTGcatgattttcattttattgctCTTTCATTATTTAATTGG
ATTATAAATACTTTGGGGGAttagttttgcttatttttacgAATTTGGGT
GTATCCGAGAATTCAGTCTTTCTGTCTTTCTgtctttaaaatgtttcttt
aCTCATTCACATCTAATCTGTTCTTCTTTTAGAAATATgctaaaaattaa
acaaattaaaTAACATTGAACAATTCCAGGAAAGGAACCACAAATTGTGA
AAGAATTATTTACTAGCATCGATCAAGTAATTTGTGatcaaaatttgtca
tcaaGATTGCATAGCCATTTCTATACATTaagaaaatgaatttcgaattc
GGAAATGTATCGATTAAGCTTCCAGTAAAAGTTGGATCCAAAGAACCACT
CAATCCCTTTGAATTGGCTTTTGATCTTGAATTTAACGaaaaaaaGATCG
GTTCTTTTCAACTCACCCTTGAAAGTTTTGATGCTGGTTTTGAACTAAga
gattttagcaaaaatagttTATCGTTTAAACCAAGCCATGATGAAATTGA
ATCGCAGTCATCAATTGATGAAGATCTCGAACAAGAAAGTGACAATGAAC
CTGAGGAAATAATTCCTTGATTGGGAGAGAGCTTCGAAAACGATCTCCAA
AGAATTATAATGAAGAAACTGAAGATTACCAACAGCAGAACCGGCAAACA
AAACGAAGAGTAAAAGAGATGAGAAAGTTTCAATGTAATGATTGTGGTGC
CGAATATCGCAAAAGTACAAAACTCAGAATCCATCATGATACCGTTCATA
AAGGGCTTCGACCATTTGagtgtcaagaatgtggtaaaaaaTTTGGCAGA
AAAGACACTTTGGGAAAACATCTGAAACTTCACGAAAAAGATAAACAATT
GAATTTACAATTATGTTCACCTGCGATTCCAGCAAACCAAATAGTTTGCG
TGGTAGATAATATGCCTCAGAAGCAGATGAAAGAAAATGTACAGGAGCCA
GATTCCaaacaaaatgaagaaagtttaaagaaagaaaaagtcaaatatAT
TGAATGCGAGGATTGTGGACTTCGTTTTGCACAGAATTATAAGTATAAAA
TACATCATGATACAGTCCATAAAGGGCTTCGACCATTTgaatgtcaagaa
tgtggtaaaactTTTGGAAGAAAAGATGTCATTGGAAGGCATATaaaaaa
aCTACACACGAAAGATAAAACATATAAATGTCAAGTATGcgatgaatttt
tttcattggaaagCGATTTAATTTTACACAGCACAACCATTCATGCGAAT
TCGGAAATAGCTTATGAAGCCGAAGTTAATGCGAATTCTGAAATATCTCA
TGAAGCCGAAGTTAATGTTACCCTACCTACTTTTACTGCCTTTCTTAATG
AAGACCTATCATTATCGGACAAAAATTGTTGA Coding sequence (CDS) from alignment at sc0000061_pilon:140774..143155+ >XLOC_044023 ID=XLOC_044023|Name=XLOC_044023|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2238bp|location=Sequence derived from alignment at sc0000061_pilon:140774..143155+ (Clytia hemisphaerica_ch_hm2_pilon)
atgaattttgaaattggaaaTGTGTCGATTAAACTTCTGGTGAAAGTTGG
ATCTGAGGAATCAACCGATCCTTTCAAATTATCTTTtaatatcaaattta
ataacAAAGAAATTGGCTCATTTCAAAtcaccttggAaaattttgatacC
AGTTTGGAACTCAGAGATTTGGGTAAAAATAGTATATTATTTAAACCAAG
CAATGAAACTTatgaattttgaaattggaaaTGTGTCGATTAAACTTCTG
GTGAAAGTTGGATCTGAGGAATCAACCGATCCTTTCAAATTATCTTTtaa
tatcaaatttaataacAAAGAAATTGGCTCATTTCAAAtcaccttggAaa
attttgatacCAGTTTGGAACTCAGAGATTTGGGTAAAAATAGTATATTA
TTTAAACCAAGCAATGAAACTTaaaaaaaattacaacaAACTTGTGACAA
TGAACAAGAGGAAGATAGTCCTTTGGTTGAAGAttgtcaaaagaaaagtg
aacGAGAGCTTCGGAAAGGATCTCCTAAGAATTATAGAGGAGATGCTGAA
AATTATTTAGAAGGAAAACAAGaaaaaaaattacaacaAACTTGTGACAA
TGAACAAGAGGAAGATAGTCCTTTGGTTGAAGAttgtcaaaagaaaagtg
aacGAGAGCTTCGGAAAGGATCTCCTAAGAATTATAGAGGAGATGCTGAA
AATTATTTAGAAGGAAAACAAGATTACCAACAGCAGAACCGGCAAACAAA
ACGAAGAGTAAAAGAGATGAGAAAGTTTCAATGTAATGATTGTGGTGCCG
AATATCGCAAAAGTACAAAACTCAGAATCCATCATGATACCGTTCATAAA
GGGCTTCGACCATTTGagtgtcaagaatgtggtaaaaaaTTTGGCAGAAA
AGACACTTTGGGAAAACATCTGAAACTTCACGAAAAAGATAAACAATTGA
ATTTACAATTATGTTCACCTGCGATTCCAGCAAACCAAATAGTTTGCGTG
GTAGATAATATGCCTCAGAAGCAGATGAAAGAAAATGTACAGGAGCCAGA
TTCCaaacaaaatgaagaaagtttaaagaaagaaaaagtcaaatatATTG
AATGCGAGGATTGTGGACTTCGTTTTGCACAGAATTATAAGTATAAAATA
CATCATGATACAGTCCATAAAGGGCTTCGACCATTTgaatgtcaagaatg
tggtaaaactTTTGGAAGAAAAGATGTCATTGGAAGGCATATaaaaaaaC
TACACACGAAAGATAAAACATATAAATGTCAAGTATGcgatgaatttttt
tcattggaaagCGATTTAATTTTACACAGCACAACCATTCATGCGAATTC
GGAAATAGCTTATGAAGCCGAAGTTAATGCGAATTCTGAAATATCTCATG
AAGCCGAAGTTAATGTTACCCTACCTACTTTTACTGCCTTTCTTAATGAA
GACCTATCATTATCGGACAAAAATTGTTGAATTACCAACAGCAGAACCGG
CAAACAAAACGAAGAGTAAAAGAGATGAGAAAGTTTCAATGTAATGATTG
TGGTGCCGAATATCGCAAAAGTACAAAACTCAGAATCCATCATGATACCG
TTCATAAAGGGCTTCGACCATTTGagtgtcaagaatgtggtaaaaaaTTT
GGCAGAAAAGACACTTTGGGAAAACATCTGAAACTTCACGAAAAAGATAA
ACAATTGAATTTACAATTATGTTCACCTGCGATTCCAGCAAACCAAATAG
TTTGCGTGGTAGATAATATGCCTCAGAAGCAGATGAAAGAAAATGTACAG
GAGCCAGATTCCaaacaaaatgaagaaagtttaaagaaagaaaaagtcaa
atatATTGAATGCGAGGATTGTGGACTTCGTTTTGCACAGAATTATAAGT
ATAAAATACATCATGATACAGTCCATAAAGGGCTTCGACCATTTgaatgt
caagaatgtggtaaaactTTTGGAAGAAAAGATGTCATTGGAAGGCATAT
aaaaaaaCTACACACGAAAGATAAAACATATAAATGTCAAGTATGcgatg
aatttttttcattggaaagCGATTTAATTTTACACAGCACAACCATTCAT
GCGAATTCGGAAATAGCTTATGAAGCCGAAGTTAATGCGAATTCTGAAAT
ATCTCATGAAGCCGAAGTTAATGTTACCCTACCTACTTTTACTGCCTTTC
TTAATGAAGACCTATCATTATCGGACAAAAATTGTTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000061_pilon | genome | sc0000061_pilon:140774..143155 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 925-1134:2173 |
| Aaloc | 373-918:1627 |
| Aaloc | 223-369:244 |
| Aaloc | 10-219:1 |
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