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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000061_pilon:100996..102894+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_043978 ID=XLOC_043978|Name=XLOC_043978|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1899bp|location=Sequence derived from alignment at sc0000061_pilon:100996..102894+ (Clytia hemisphaerica_ch_hm2_pilon)
tgcAGACCGAATGAATTACTGGAAAAGGAGATAGAAACCATGATGCTGTT
CTTATGTGACAGACTGAAAGACCACCATAAAATACAACCCTTAGTTATCT
ATGGTTTCTTAGGGCTTGTTTCCCATCATCCTGTACCTGAGCCTCTCATC
CTGCAGATGATCAGGGCAATTTTTGCTGAagttcatgttcagtcattggT
ACAGGCTGATCGTTacaatgtttttaacttgtttgggaaccttttaaaat
tgaaattgaacattttgaaacaaatttcaTCCGATTTTGTTTTTGGATTT
ATACAAGCGATAGACGGTGAAAGAGATCCACGTAATCTGGTCTTGTGTTT
CCAAAATTCATGCATTGTTTTGAAAGAGCTTGATATTTCATTGTTTGTTG
AAGATTTCTTTGAAGTGTTATCTTGTTACTTTCCAGTAGAATTTAACCCA
CCTAAAGAGAATGACTACGGTGTTACCAGAGAACAATTAGTTGGGAACCT
ACACAAATGTTTATGTTCAACATCTGCGTTTGCCCCTTATAGTATACCCT
TGTTCATTGAGAAACTGTCTTCAGACATGACCGAAGCTAAGAGAGACTCT
CTGGCTATAATGACCGATATTCTGTCAGAAGCTGGACCCCATCTACAACT
TTTTGTTAAAGATATATGGATGAGTATTCGAAAAGATTTCTTATTCAGTG
AAGATGAAGACCTGAAAAGAGattatgaaaaatttatccGGAAATTTGTT
GCATCTTTAGCAGTCCTAGAAGATAAGACCGAATTGAATCATTTAATGGA
GAACTTCATGAAAGATTGCTGTCAAAGCTTAAAGGATCCTGATATGTCGA
TTGCAGAACAGTGTGGAAGACTGATCTCCGTATTTGCAAATGCTTCTCCG
ATAGTTGATGAAACTATACTCAAAAGTTTGTTACAACCAACTGAAACAGC
ACTGCAGAAAAATCTATCACCTAACCAATGTGCTACTTGTTTAGAATTTG
CACATTATTTACTTTCCATCGACATCTCTGGTGTTTCTCCTGATTTGCGT
CAACAGTATTTGGAGTTTGCTGGAAGCATGTCATCAGTATTATTCGAGAG
TTTAAAAGGAGACGAGAATACTAAGCTAACAAATGCTTCAGTTACATGTT
TAGCTAAGATCATGGAAGTACAAAATTTGCTAACAGACGTTTCAACCATT
GTTGATGCCGAACTGATATcccaacattttttcaacatgCTATTCAACAA
AGTCAAGAAATGCCCAACAGAACCAGTCAATGATTTCATGAGAGTATTAT
GGATTCATTATCCATCACACATAAGAGAGAAGTTTTTGGCTCCTCTCCAG
CAATTAGATTCTGAAAAAGCTGTTGTTTATATACCATTGTTATCGCATTG
TTCCCAAGATGACGAAGCTgccattttgaaatatctgatCAAGATGATTT
TACCTTTAATTGATTCTGAAAACGTGGAAATATTCGATAAATTTGTTTCT
AGTTTTTGTGAATTACTTACCAAATCAAAGACAGCATACACCAGAACTGA
TTTTCTGGACCTCCTTATTGAGAGTGTTAGCTCGAGACAAGGTTTCCTCA
AACATAGTCATTTATGGGGCTTTAGTAGAATTATGGTCTGTGTTTTTAAC
AATCTACCAGAAACCCTTCAAAGAGAGCTGATCAACGAAGTTAAAAACTC
AATCCAAGAGTCAACGAATATATCATTCAAAGACATTTTTATAGTATTTT
GTGCTTTATACAAATCGAACAAAAGTGATTTAGCAGAGGACTTTGAAATC
CTTGAAAGTTTTCTCATAAAGACTGGTAATGAATCAAGAAATGATGTGTT
GCAAACACTGATTGGTTTATCGCTGGCATTGCTGGTGAATCGATATGGT Coding sequence (CDS) from alignment at sc0000061_pilon:100996..102894+ >XLOC_043978 ID=XLOC_043978|Name=XLOC_043978|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3798bp|location=Sequence derived from alignment at sc0000061_pilon:100996..102894+ (Clytia hemisphaerica_ch_hm2_pilon)
tgcAGACCGAATGAATTACTGGAAAAGGAGATAGAAACCATGATGCTGTT
CTTATGTGACAGACTGAAAGACCACCATAAAATACAACCCTTAGTTATCT
ATGGTTTCTTAGGGCTTGTTTCCCATCATCCTGTACCTGAGCCTCTCATC
CTGCAGATGATCAGGGCAATTTTTGCTGAagttcatgttcagtcattggT
ACAGGCTGATCGTTacaatgtttttaacttgtttgggaaccttttaaaat
tgaaattgaacattttgaaacaaatttcaTCCGATTTTGTTTTTGGATTT
ATACAAGCGATAGACGGTGAAAGAGATCCACGTAATCTGGTCTTGTGTTT
CCAAAATTCATGCATTGTTTTGAAAGAGCTTGATATTTCATTGTTTGTTG
AAGATTTCTTTGAAGTGTTATCTTGTTACTTTCCAGTAGAATTTAACCCA
CCTAAAGAGAATGACTACGGTGTTACCAGAGAACAATTAGTTGGGAACCT
ACACAAATGTTTATGTTCAACATCTGCGTTTGCCCCTTATAGTATACCCT
TGTTCATTGAGAAACTGTCTTCAGACATGACCGAAGCTAAGAGAGACTCT
CTGGCTATAATGACCGATATTCTGTCAGAAGCTGGACCCCATCTACAACT
TTTTGTTAAAGATATATGGATGAGTATTCGAAAAGATTTCTTATTCAGTG
AAGATGAAGACCTGAAAAGAGattatgaaaaatttatccGGAAATTTGTT
GCATCTTTAGCAGTCCTAGAAGATAAGACCGAATTGAATCATTTAATGGA
GAACTTCATGAAAGATTGCTGTCAAAGCTTAAAGGATCCTGATATGTCGA
TTGCAGAACAGTGTGGAAGACTGATCTCCGTATTTGCAAATGCTTCTCCG
ATAGTTGATGAAACTATACTCAAAAGTTTGTTACAACCAACTGAAACAGC
ACTGCAGAAAAATCTATCACCTAACCAATGTGCTACTTGTTTAGAATTTG
CACATTATTTACTTTCCATCGACATCTCTGGTGTTTCTCCTGATTTGCGT
CAACAGTATTTGGAGTTTGCTGGAAGCATGTCATCAGTATTATTCGAGAG
TTTAAAAGGAGACGAGAATACTAAGCTAACAAATGCTTCAGTTACATGTT
TAGCTAAGATCATGGAAGTACAAAATTTGCTAACAGACGTTTCAACCATT
GTTGATGCCGAACTGATATcccaacattttttcaacatgCTATTCAACAA
AGTCAAGAAATGCCCAACAGAACCAGTCAATGATTTCATGAGAGTATTAT
GGATTCATTATCCATCACACATAAGAGAGAAGTTTTTGGCTCCTCTCCAG
CAATTAGATTCTGAAAAAGCTGTTGTTTATATACCATTGTTATCGCATTG
TTCCCAAGATGACGAAGCTgccattttgaaatatctgatCAAGATGATTT
TACCTTTAATTGATTCTGAAAACGTGGAAATATTCGATAAATTTGTTTCT
AGTTTTTGTGAATTACTTACCAAATCAAAGACAGCATACACCAGAACTGA
TTTTCTGGACCTCCTTATTGAGAGTGTTAGCTCGAGACAAGGTTTCCTCA
AACATAGTCATTTATGGGGCTTTAGTAGAATTATGGTCTGTGTTTTTAAC
AATCTACCAGAAACCCTTCAAAGAGAGCTGATCAACGAAGTTAAAAACTC
AATCCAAGAGTCAACGAATATATCATTCAAAGACATTTTTATAGTATTTT
GTGCTTTATACAAATCGAACAAAAGTGATTTAGCAGAGGACTTTGAAATC
CTTGAAAGTTTTCTCATAAAGACTGGTAATGAATCAAGAAATGATGTGTT
GCAAACACTGATTGGTTTATCGCTGGCATTGCTGGTGAATCGATATGGTt
gcAGACCGAATGAATTACTGGAAAAGGAGATAGAAACCATGATGCTGTTC
TTATGTGACAGACTGAAAGACCACCATAAAATACAACCCTTAGTTATCTA
TGGTTTCTTAGGGCTTGTTTCCCATCATCCTGTACCTGAGCCTCTCATCC
TGCAGATGATCAGGGCAATTTTTGCTGAagttcatgttcagtcattggTA
CAGGCTGATCGTTacaatgtttttaacttgtttgggaaccttttaaaatt
gaaattgaacattttgaaacaaatttcaTCCGATTTTGTTTTTGGATTTA
TACAAGCGATAGACGGTGAAAGAGATCCACGTAATCTGGTCTTGTGTTTC
CAAAATTCATGCATTGTTTTGAAAGAGCTTGATATTTCATTGTTTGTTGA
AGATTTCTTTGAAGTGTTATCTTGTTACTTTCCAGTAGAATTTAACCCAC
CTAAAGAGAATGACTACGGTGTTACCAGAGAACAATTAGTTGGGAACCTA
CACAAATGTTTATGTTCAACATCTGCGTTTGCCCCTTATAGTATACCCTT
GTTCATTGAGAAACTGTCTTCAGACATGACCGAAGCTAAGAGAGACTCTC
TGGCTATAATGACCGATATTCTGTCAGAAGCTGGACCCCATCTACAACTT
TTTGTTAAAGATATATGGATGAGTATTCGAAAAGATTTCTTATTCAGTGA
AGATGAAGACCTGAAAAGAGattatgaaaaatttatccGGAAATTTGTTG
CATCTTTAGCAGTCCTAGAAGATAAGACCGAATTGAATCATTTAATGGAG
AACTTCATGAAAGATTGCTGTCAAAGCTTAAAGGATCCTGATATGTCGAT
TGCAGAACAGTGTGGAAGACTGATCTCCGTATTTGCAAATGCTTCTCCGA
TAGTTGATGAAACTATACTCAAAAGTTTGTTACAACCAACTGAAACAGCA
CTGCAGAAAAATCTATCACCTAACCAATGTGCTACTTGTTTAGAATTTGC
ACATTATTTACTTTCCATCGACATCTCTGGTGTTTCTCCTGATTTGCGTC
AACAGTATTTGGAGTTTGCTGGAAGCATGTCATCAGTATTATTCGAGAGT
TTAAAAGGAGACGAGAATACTAAGCTAACAAATGCTTCAGTTACATGTTT
AGCTAAGATCATGGAAGTACAAAATTTGCTAACAGACGTTTCAACCATTG
TTGATGCCGAACTGATATcccaacattttttcaacatgCTATTCAACAAA
GTCAAGAAATGCCCAACAGAACCAGTCAATGATTTCATGAGAGTATTATG
GATTCATTATCCATCACACATAAGAGAGAAGTTTTTGGCTCCTCTCCAGC
AATTAGATTCTGAAAAAGCTGTTGTTTATATACCATTGTTATCGCATTGT
TCCCAAGATGACGAAGCTgccattttgaaatatctgatCAAGATGATTTT
ACCTTTAATTGATTCTGAAAACGTGGAAATATTCGATAAATTTGTTTCTA
GTTTTTGTGAATTACTTACCAAATCAAAGACAGCATACACCAGAACTGAT
TTTCTGGACCTCCTTATTGAGAGTGTTAGCTCGAGACAAGGTTTCCTCAA
ACATAGTCATTTATGGGGCTTTAGTAGAATTATGGTCTGTGTTTTTAACA
ATCTACCAGAAACCCTTCAAAGAGAGCTGATCAACGAAGTTAAAAACTCA
ATCCAAGAGTCAACGAATATATCATTCAAAGACATTTTTATAGTATTTTG
TGCTTTATACAAATCGAACAAAAGTGATTTAGCAGAGGACTTTGAAATCC
TTGAAAGTTTTCTCATAAAGACTGGTAATGAATCAAGAAATGATGTGTTG
CAAACACTGATTGGTTTATCGCTGGCATTGCTGGTGAATCGATATGGT
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000061_pilon | genome | sc0000061_pilon:100996..102894 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1-1899:1 |
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