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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000061_pilon:78404..80344+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_043947 ID=XLOC_043947|Name=XLOC_043947|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1941bp|location=Sequence derived from alignment at sc0000061_pilon:78404..80344+ (Clytia hemisphaerica_ch_hm2_pilon)
CTGAGCCCAACTTTAATGCAGAAGTATACACAACAGAAGAAATTCTTTAA
GCAAGATTTATGTCATTTATTAAGAGGATTACCAAACTCAAAACGTAAAC
AAGTTTTGAAAGAAGTTGCAACAGGAATGATTTGCCAAGGTgattgtctt
tctttttttacacttATTAATTCTTACATTTTACAATATCTTGAAGTCTT
CAATCCTGGGAGTGAGTTTCAGAGGATACCCAATTCCAACATTCCGTCAA
TTGTTTGTACAGTTCCCGTCACACCCTAAGAACGTGAACCGAAATTCCGC
CaacgaaaatttctttgaatgtgAAGTTGTTCTTTTTTCAAAGTATCATT
TTTCTGGTAAAAAGTCATATGTTTTTGCATTATCAGAACCATAATTGTTA
atagtcttttttttttgcagtatGAACATTCCCGAGACAACCTAGTGAGC
TCTTTCTGGTTTTCGCCATTTCCTTAAAGAATATATGAAAGTAGATATCC
CACCAGCGCAGACTTGACTTAAAGAATGGATGTGGgaaaaatgttttctc
aaaatttaactCGaaaaaaaGCCCTTTTTCTTGTGATTAAAAATGCGCAA
ACAGTAGGTAACGTCTTTATAAatgattttcattaattttcatttgtaGG
AGTTGCACTAGATGCCTTCCTTAAGCAACAAAAATGCATTGACAATTATG
TTCGTCTCAGTATCCACCAGCATCATCCTGAAACCGGAAAATTCGCTATC
GATCTCTTCAAAAATAAGTGTAGGTTGTACGGTGGTAGCGCCCAGCTTCG
GACACCTTGGCACAATACGGTACTATTCGATACACAGACCGGtgaattca
aaattgatttcaaagaaGCTAACAGAGAAGCTAGCAAGGTGGAAGACAGT
CTAACCAGCATGGTTTATTACCGTTCCAAACCTTATTTTTATGTTAAGCT
TTACTTGTCTCGTCCATTGAAAGGTGATTATTTGAATCTGAAGATCTCCA
TGGTTCGAAACTCATGTGGAATGGTAATTGAAGCTTATGAGAGGAGTAAA
GTTGGTCCTGATATTTTTACACCTGAAACTATTCTTGCTTTAACGCATGA
ATTTGGTGTTGTTGTGCTTAGAGGTTTTAATGAGTTTGAAGACGAACAAG
ACCTTCTACATTACTATAGAGATCACATGAAGCAAAGAGTCTTGAACTGG
AGTTTTGGTCCCATCCATAAAGTCAAACCAGACAAAGATATGCCTGGCTA
TGTTAATAGTCATGATGGGATACCCGTTCATTGGGATATGGTGGCCCCAC
CTAAATACATGGGCGTTGACCAAGCTATACACAAGTATGAGGATTTCATT
TGTCCAGTATTTGCGCTTTACTGTCGTAGCACTAACCGTTTGTCGGACTC
CGTAGGTGAAGATGACAGGGAAGGCGCAACGACGTTTATCGATTCAATAG
CTGTGGTTCAATCACTTCACGGATGCACCATAGAAGATTGGAAAAATACA
AAACTCCAGTATGAGACTCGACTTCTCAAAACGGACAACCAAGGAAATGA
AGTCTATTTTGGTGGCAAAGATAACTCATATACGTACCCACTTATACATG
AATGCCCAAACAAAGATGGTGTTGATTCTCTACGGTGGTGGCAGAGCTGG
TCAAAAGGAGAATTCGCAAATGCCAAGCAACATAATCAATTCAATATTCA
AGATTCACCCGACTCGATGAGTGACGTAACCTCACAAGAGCTGGAAGAAG
AGATACGTAAAGCTGCttttgacgaaagatttttcttttggcATCAATAC
AAACAAGGTGATCTAGTTTTTGTCAACAATGAAACGACACTTCACGGTCG
TAACGCGTTTGGAAATTCTGACAGGGAATTATGGAGAATACAATCATTGC
CAGATTCTCAAAACTTGCCAGAGTTTTTTAATCGACAATGA Coding sequence (CDS) from alignment at sc0000061_pilon:78404..80344+ >XLOC_043947 ID=XLOC_043947|Name=XLOC_043947|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2862bp|location=Sequence derived from alignment at sc0000061_pilon:78404..80344+ (Clytia hemisphaerica_ch_hm2_pilon)
CTGAGCCCAACTTTAATGCAGAAGTATACACAACAGAAGAAATTCTTTAA
GCAAGATTTATGTCATTTATTAAGAGGATTACCAAACTCAAAACGTAAAC
AAGTTTTGAAAGAAGTTGCAACAGGAATGATTTGCCAAGCTGAGCCCAAC
TTTAATGCAGAAGTATACACAACAGAAGAAATTCTTTAAGCAAGATTTAT
GTCATTTATTAAGAGGATTACCAAACTCAAAACGTAAACAAGTTTTGAAA
GAAGTTGCAACAGGAATGATTTGCCAAGGAGTTGCACTAGATGCCTTCCT
TAAGCAACAAAAATGCATTGACAATTATGTTCGTCTCAGTATCCACCAGC
ATCATCCTGAAACCGGAAAATTCGCTATCGATCTCTTCAAAAATAAGTGT
AGGTTGTACGGTGGTAGCGCCCAGCTTCGGACACCTTGGCACAATACGGT
ACTATTCGATACACAGACCGGtgaattcaaaattgatttcaaagaaGCTA
ACAGAGAAGCTAGCAAGGTGGAAGACAGTCTAACCAGCATGGTTTATTAC
CGTTCCAAACCTTATTTTTATGTTAAGCTTTACTTGTCTCGTCCATTGAA
AGGTGATTATTTGAATCTGAAGATCTCCATGGTTCGAAACTCATGTGGAA
TGGTAATTGAAGCTTATGAGAGGAGTAAAGTTGGTCCTGATATTTTTACA
CCTGAAACTATTCTTGCTTTAACGCATGAATTTGGTGTTGTTGTGCTTAG
AGGTTTTAATGAGTTTGAAGACGAACAAGACCTTCTACATTACTATAGAG
ATCACATGAAGCAAAGAGTCTTGAACTGGAGTTTTGGTCCCATCCATAAA
GTCAAACCAGACAAAGATATGCCTGGCTATGTTAATAGTCATGATGGGAT
ACCCGTTCATTGGGATATGGTGGCCCCACCTAAATACATGGGCGTTGACC
AAGCTATACACAAGTATGAGGATTTCATTTGTCCAGTATTTGCGCTTTAC
TGTCGTAGCACTAACCGTTTGTCGGACTCCGTAGGTGAAGATGACAGGGA
AGGCGCAACGACGTTTATCGATTCAATAGCTGTGGTTCAATCACTTCACG
GATGCACCATAGAAGATTGGAAAAATACAAAACTCCAGTATGAGACTCGA
CTTCTCAAAACGGACAACCAAGGAAATGAAGTCTATTTTGGTGGCAAAGA
TAACTCATATACGTACCCACTTATACATGAATGCCCAAACAAAGATGGTG
TTGATTCTCTACGGTGGTGGCAGAGCTGGTCAAAAGGAGAATTCGCAAAT
GCCAAGCAACATAATCAATTCAATATTCAAGATTCACCCGACTCGATGAG
TGACGTAACCTCACAAGAGCTGGAAGAAGAGATACGTAAAGCTGCttttg
acgaaagatttttcttttggcATCAATACAAACAAGGTGATCTAGTTTTT
GTCAACAATGAAACGACACTTCACGGTCGTAACGCGTTTGGAAATTCTGA
CAGGGAATTATGGAGAATACAATCATTGCCAGATTCTCAAAACTTGCCAG
AGTTTTTTAATCGACAATGAGAGTTGCACTAGATGCCTTCCTTAAGCAAC
AAAAATGCATTGACAATTATGTTCGTCTCAGTATCCACCAGCATCATCCT
GAAACCGGAAAATTCGCTATCGATCTCTTCAAAAATAAGTGTAGGTTGTA
CGGTGGTAGCGCCCAGCTTCGGACACCTTGGCACAATACGGTACTATTCG
ATACACAGACCGGtgaattcaaaattgatttcaaagaaGCTAACAGAGAA
GCTAGCAAGGTGGAAGACAGTCTAACCAGCATGGTTTATTACCGTTCCAA
ACCTTATTTTTATGTTAAGCTTTACTTGTCTCGTCCATTGAAAGGTGATT
ATTTGAATCTGAAGATCTCCATGGTTCGAAACTCATGTGGAATGGTAATT
GAAGCTTATGAGAGGAGTAAAGTTGGTCCTGATATTTTTACACCTGAAAC
TATTCTTGCTTTAACGCATGAATTTGGTGTTGTTGTGCTTAGAGGTTTTA
ATGAGTTTGAAGACGAACAAGACCTTCTACATTACTATAGAGATCACATG
AAGCAAAGAGTCTTGAACTGGAGTTTTGGTCCCATCCATAAAGTCAAACC
AGACAAAGATATGCCTGGCTATGTTAATAGTCATGATGGGATACCCGTTC
ATTGGGATATGGTGGCCCCACCTAAATACATGGGCGTTGACCAAGCTATA
CACAAGTATGAGGATTTCATTTGTCCAGTATTTGCGCTTTACTGTCGTAG
CACTAACCGTTTGTCGGACTCCGTAGGTGAAGATGACAGGGAAGGCGCAA
CGACGTTTATCGATTCAATAGCTGTGGTTCAATCACTTCACGGATGCACC
ATAGAAGATTGGAAAAATACAAAACTCCAGTATGAGACTCGACTTCTCAA
AACGGACAACCAAGGAAATGAAGTCTATTTTGGTGGCAAAGATAACTCAT
ATACGTACCCACTTATACATGAATGCCCAAACAAAGATGGTGTTGATTCT
CTACGGTGGTGGCAGAGCTGGTCAAAAGGAGAATTCGCAAATGCCAAGCA
ACATAATCAATTCAATATTCAAGATTCACCCGACTCGATGAGTGACGTAA
CCTCACAAGAGCTGGAAGAAGAGATACGTAAAGCTGCttttgacgaaaga
tttttcttttggcATCAATACAAACAAGGTGATCTAGTTTTTGTCAACAA
TGAAACGACACTTCACGGTCGTAACGCGTTTGGAAATTCTGACAGGGAAT
TATGGAGAATACAATCATTGCCAGATTCTCAAAACTTGCCAGAGTTTTTT
AATCGACAATGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000061_pilon | genome | sc0000061_pilon:78404..80344 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 142-1431:652 |
| Aaloc | 1-138:1 |
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