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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000348_pilon:210149..214788+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_043909 ID=XLOC_043909|Name=XLOC_043909|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4640bp|location=Sequence derived from alignment at sc0000348_pilon:210149..214788+ (Clytia hemisphaerica_ch_hm2_pilon)
atGTCAACACTATCAACCAATGAAGTGGCAGCaaaaaaaCCGGCACCCGA
ACAAACTCCGGCCCAGACCTCAAACCCGAAGGAACCTAGTACCCAACCCT
CCACGTCAAGCGATGCAGCTGGTTCAAGTAAGAGTACTGGGGGAGAGGGT
AGTGGgaagaaaaaattgataaagaGCACTTCTTCGGTGAGCGACCTTCC
CATGGCAGGGGCATCTATGGACAATGATTCTGCAGTTTCTGAGGAACAAG
AAGTGGAACGACGAAAGTTACAGTAAGGCtttttttCCTTTGCACATAGT
ATGGATTGTAGGTAGGAAACTTCTAATAGATGGAGTTAGATCTTAGAGAA
GCATCTCCAAACTATGATAGAGCTTTTTTGTGGAAAATAAATGTTATtgg
tattttttaaattaaataataCATTATAAAACTAGCGTACAATGAGGCTG
CTTTAGTGATGGCTGTTGGAAACTGATTGGATTTAGGACTTGTAATCACA
CCtcaattaaaacaaaattagcATTGACTTCACTCGATTTAAGAAGGATT
ATTTGCCATTTGTTGTGATATCTCCGCCAACCTGCGCTGATTGAAGTAAC
ATCTCGTAtttttttCGGGCTTGCAAACGATAACGTAACATTTCTTGCCG
TATAAGAACACCACGTAGAATATACTATTACACACTACTATCAAACAATG
CACAAATTCTTTATCCTCGATTTCCCGAAAATATCCGATCGGGTAACTGA
TGATGAATGTTAGTGTTGTAACCATGGTCGCGTAGACAAGAGACATAGCA
TCGTTCATCGGTCCAGGTAGGCGGCGACCACGGAACGCTTGCGTTAGACA
AACTAACTGAGCGATGATAAGGAAGCCTGTGATGACGTTTAGATGAAGTT
GGACGTCTCCGTAAAAAGTTCTTGTCATGTTTTCTTTGTCTAGTATGATG
CTTATCCTTGGCTTTCTGATAAAATTCAATATGTAGAAAACACTGTTGGT
GACCAATAGAAATATGAAAACGGTGAAAACTTGGACGACTATCGTTCTTC
GTGCCTCGCCCCCTGTCAATTGTATGTTAGAAGTGAAAGCATCAATCAAT
TTCTGTGATTTTGTATACACGAAAGCGAGGTTGGCAGTGTAAAGAAGTGA
TAGATTCAGGAACTTTGCAACAGTTTTTGTTTTATCTATGTCGTCGTGAA
GATAGACAAAACAGCTGAATAGAATGGAAAGCAAGATGGTTCCGAGAtga
agaaacgagaagaaaacaTCAGAAACTTTCACTGTCGGTGTTTGTCGGTG
AATAATGAAAATGACCAGCGTTGTCATGGTGATGAACACTCCAAGAGTTG
TTAGTAGAAGTATTGTAATCTTTTGATGGTGATTGAATTTTAAATATATG
TTTGTGAATGGATCTACGCATTCAGTTCTCAAGACGTTTGCGCTGCTTCG
AATCCCAAAACAAGTGGTACAAGCTTCATTCCCGAAGTTGTTCTTGATCT
GGTTCTGAGGACATAACTCGCATTTAAATCCAAGCTCTGATTGGATGAAC
TTGTCAGAACTTTCGATCTCACCATAAACCCTTTGGAAGCCTGGTGAACA
GTTTAGTTTAGCGAAAGGTAATGGGTTTCGGTATTTGCTCAAAAATATAT
CTGACGAATAAGTTTCAATAAAAGGCTCCCAATTAGGATCCTCATTCCCT
TTATTCTTCTCAAGAATTTTATTAAAAGGTATCATGAaatctttagtttt
tttctctaaaaacacCATCATCATGGCGCCTTTGAGTGCTTGTATCTTAT
CGAAGCTtgtgatgacagttttgttttGCACATGCTCGACAGCAATGCCA
AGAAAAGATGCCAACAGAAGCACATGTCTAATTGCGAGTAACTCTGTCAA
TTCGAAGATGCTGTTCGCCACATCTTCCTGTAGATCTCGTCGCAACTTGT
AGCGTTGGAAATTCTCCAAGCTGAACCAATGATCATGTGTGTTGAAGTCG
TGAAAacttgtttggtcattttcaaaagataacATGTCATGAGCGATCAA
GGACGTTTTGTTGGTTGTTTCTACATTAACGTCTAATATCGCtagaaatt
ctttttgaaaaggtccaaaTAGAATAATGGCTGACTCGCCCTTTCGCCAA
CGATTTAAGAGGTCTGATAGAATGTAGCCTTCAACATGAACTTTTTCCGC
ATTGATGACGATTTTCTGCAAATGAAATTCTTTTCTACCAGCCAATTGGT
CATAAGTACCATTGTAGTAATTGTTGAAGATCGGTTTCAATACATCATCG
TGGACTAAAAGTAGGGTCAAATCTTTCCATTGTAATTTCTCTAATACATA
TATGAGATACCTGGTATAGTCATTTATCTTCAAATCGTCATCAGGGAATG
CGACCGTCAAAAATGGTTCCCCAGTCATAAATTGCTTGAAcattttggct
gtttttgtaCTATCAGCATAGAAGACTACAAAAGCCAAATTGGGTATTCT
GCATTCTCTGTTTTGGTCGCAAGCAATGTGGAATGTGTGGCCCAGAAGAA
TTTCCAAAGCTGCTTTCAAAGACTCTTCTGTGTTGTTGCATTTATAATGG
AAACTATGGTATTTCAATTCGATGTAACGCATGTCTGTATTGAGTCCAGT
AATGTTTGCTCTTAAAAAACTGTCTGCCTCCTGTGTATTATCTGAACAGT
TTGGTAAGATAGCCACGACGTGATAAGTGAGTATGTGCTTGCTTAAAGCA
ATCTGTATTAAACTGGTAAAGAATAGAACGCCAAGAACTTTACAATTCAT
TTTTATCATCTCTCTGAGCAACTACTACGTTTCTTCTGAATCAAAGATAT
GTTATATGTTGGGATACTTGTTAGTTTGGTCTCGATATCTAATCAAATAT
TGATTTCACCTGCCCGAATAAAAACTTTCTGTTGTTAAATTTTAATaggt
tctttttttttcagtccaatTATCATATGCTTTTGTAGCTTGATTCGCAC
TTTGGTACTCAATatattgattaaaaaatacTATACAAGAAGAAGTTTCT
CGTGGCTTAGATCACGAGAATTACGCAAacgttttgagaatttttctccC
ATCATCGGTCATTCTGGAAGTTTTTCTCTCTAGTTTACTTTTGCCACAAT
AAGCTTCCAATATGCATATCACTTGGTCGATAGACTCAAAATTACTTAAA
CTTATGGTACTTGTTATGGAAAAATTTGGGTCGTAATTGAGTCAATTGAA
AGGTCATTCTCGTCTTCCTCTACAGTGTCACTTTCGATTTATTTACCGCA
CAAAATTACCATATTAGGCCCCGACCAGTCCAAACAGAGTAAAATCGTTC
CTTGTTCTAAACTTGGATAACATGCATTGGATTTTAACCATATATTTCTC
GCTTTGAGATATGAATAGAAGACCAGTACAGTATAATAACTCCAGCATTC
TTTTTCTTTCCCTGCTGATTACTACTCCATCCATTACTTTACAGGATGTT
GGTATCTGCGTTCAGCGAAGATCAGTTGAACCGTTACGAAATGTACCGAA
GAGCTTCCTTTCCAAAAGCTGCCATTAAAAGGGTGAGTGGCATATTGACC
CAATATTAGAATTGTTAACTTGAAATATCAATGTGCAAAGGGATTAAATT
TCTTGGGGGCCTTTCCATGATATATTAACGATTTTGTGTCTTTCTTTACc
agtaaacattttaaaagtgGTATTTGTGCCTTTTTAACTTTCTACTAAGA
AACAATTTTTGTGGATAACACGCAAACGCCTCGAATTTACGAGATAGAGC
ATTGGTATCAATTCTTTTTCCTTagacaaaacatttttgtttattcGACC
GATTAGACACACTTCCGGGTCAAAAGCACgaataaaaagcttttcaaaga
CCGAAATTGGACCGAGTCTTTGTCAATCTTGATATAATCCTTCTTCCCGT
GTTTAATCGTTTATTACCCCCTTTTTTAGTTGATGCAGACGATCACGGGC
GGTGCGTCCGTTCCGCCCAATGTTGTCATAGCAATGGCTGGTATCGCCAA
GGTATTTGTCGGGGAGGTCTCAGAAGAAGGTTAGTTATTACATTCTCCAT
TAGACCATGAATATCCTTTCAGAAGAGATAGACATTACAATAAGGTATAC
AAGGCGAGgtatattttccatttttgggAAGTGGAGATTTTCGTTTTTGG
TAACAAGTTCCGATAGAGCCGTTACATTTTATCCGATTTTTAGGCTTCAG
AAATTCTAATTTCACttttctttaaatttgaatTCTAAATTCGCATTATC
TAGTCAAACTTGTATACTTTTTGCCACACCAAGTATCAGATGGCGCAGTA
TTGTTATTGAACTGATGATTCTGGGAAGCGCTCGCACACCCATGGCTGAA
AAGTAGGGAACGTTGGTGAAAATGCGCAACCAACTTTCTAGTACCCTAAA
AACCAGAACCCTTTGATTTGTTCGAAAAAAGTCTTATattgattttcgta
ttttattAGCTTTAGACGTAATGGAGAGTTGGGGCGAGACTGGACCCATT
GAACCGAAACATTTGAGAGAAGCAGCAAGaagattgaaacaaaaacaatt
gcTTCAAGCCACACGATACAAAGGAACTGTCAAATTTTGA Coding sequence (CDS) from alignment at sc0000348_pilon:210149..214788+ >XLOC_043909 ID=XLOC_043909|Name=XLOC_043909|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1182bp|location=Sequence derived from alignment at sc0000348_pilon:210149..214788+ (Clytia hemisphaerica_ch_hm2_pilon)
atGTCAACACTATCAACCAATGAAGTGGCAGCaaaaaaaCCGGCACCCGA
ACAAACTCCGGCCCAGACCTCAAACCCGAAGGAACCTAGTACCCAACCCT
CCACGTCAAGCGATGCAGCTGGTTCAAGTAAGAGTACTGGGGGAGAGGGT
AGTGGgaagaaaaaattgataaagaGCACTTCTTCGGTGAGCGACCTTCC
CATGGCAGGGGCATCTATGGACAATGATTCTGCAGTTTCTGAGGAACAAG
AAGTGGAACGACGAAAGTTACAatGTCAACACTATCAACCAATGAAGTGG
CAGCaaaaaaaCCGGCACCCGAACAAACTCCGGCCCAGACCTCAAACCCG
AAGGAACCTAGTACCCAACCCTCCACGTCAAGCGATGCAGCTGGTTCAAG
TAAGAGTACTGGGGGAGAGGGTAGTGGgaagaaaaaattgataaagaGCA
CTTCTTCGGTGAGCGACCTTCCCATGGCAGGGGCATCTATGGACAATGAT
TCTGCAGTTTCTGAGGAACAAGAAGTGGAACGACGAAAGTTACAGATGTT
GGTATCTGCGTTCAGCGAAGATCAGTTGAACCGTTACGAAATGTACCGAA
GAGCTTCCTTTCCAAAAGCTGCCATTAAAAGGGATGTTGGTATCTGCGTT
CAGCGAAGATCAGTTGAACCGTTACGAAATGTACCGAAGAGCTTCCTTTC
CAAAAGCTGCCATTAAAAGGTTGATGCAGACGATCACGGGCGGTGCGTCC
GTTCCGCCCAATGTTGTCATAGCAATGGCTGGTATCGCCAAGGTATTTGT
CGGGGAGGTCTCAGAAGAAGTTGATGCAGACGATCACGGGCGGTGCGTCC
GTTCCGCCCAATGTTGTCATAGCAATGGCTGGTATCGCCAAGGTATTTGT
CGGGGAGGTCTCAGAAGAAGCTTTAGACGTAATGGAGAGTTGGGGCGAGA
CTGGACCCATTGAACCGAAACATTTGAGAGAAGCAGCAAGaagattgaaa
caaaaacaattgcTTCAAGCCACACGATACAAAGGAACTGTCAAATTTTG
ACTTTAGACGTAATGGAGAGTTGGGGCGAGACTGGACCCATTGAACCGAA
ACATTTGAGAGAAGCAGCAAGaagattgaaacaaaaacaattgcTTCAAG
CCACACGATACAAAGGAACTGTCAAATTTTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000348_pilon | genome | sc0000348_pilon:210149..214788 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 463-591:4512 |
| Aaloc | 361-459:3980 |
| Aaloc | 274-360:3496 |
| Aaloc | 1-270:1 |
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