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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000141_pilon:633760..637359- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_043842 ID=XLOC_043842|Name=XLOC_043842|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3600bp|location=Sequence derived from alignment at sc0000141_pilon:633760..637359- (Clytia hemisphaerica_ch_hm2_pilon)
TGTCCACCTCCTCCACCACCATGTCCACCTCCACCACCACCCCCTCCATG
TCCACCACCACCTCCACCATGTCCTCCACCTCCACCTTGCCCACCACCAT
GTCCACCCCCTGCTTGCCCACCACCTCCACCTCCTCCTCCACCGCCTCCA
CCACCACCTCCATGTCCACCACCACCTCCACCTCCACCACCTCCTCCCCC
TCCACCGCCTCCACCACCGCCATGTCCACCTCCCTGCCCACCACCACCTC
CACCTCCACCACCACCGTGCCCGCCACCACCACCTCCATGTCCACCGCCC
TGCCCACCTCCACCATGTCCACCACCCCCACCGCCATGCCCTCCACCTTG
CCCATGTCCCTGCCCACCACCACCAATCCCTCCTCCACCGATGGAAACGA
CCGAAGTTGAAACTCAGGTAAGATGATTTATTCAGTCATGCATGCTTTCA
AAAACATTTTTTCCATGTGACAACACTTACACAATTTTGACATAACCGAA
ACATCTTTTAAATCTCTTATCTGGAGACACGAGCATACAAGACTAATACG
GGGTCCGCAAAGAACAGCGAGATTGAAATACCTTAATACAGTGGAGTCTC
TGTAACTGAGGTTTATAGGGCAGTGTTAACCGAAGGGACGAAATTATTTG
TTCGAGTTATGGAGACATTCGAGTTATAGAATTTCGAGTTAAAGAAACTC
CACTCTATCTTATTATGACTTTAGAATCAATTTGCTATTCTTTCTATCCT
TTTTTTACTATAGCCACCAAAATGTAAAGGAAACTCTGAAGCAACTATAA
AGACAGGCAAACAAGCCAAAGACGGATGTTAACGTTAGACTCATGACATA
TACATTGACAGACTGACTGACAAATAACAAAGACGTTTAAAGTCGTTACC
TTCTAGCTTCTACGAAGCGACTCAAACAAAGGTTTTAATCAAAACAAAAG
CACCCTGTACTGACGCCTTGGCCAACATTCTACCTCATGTTTGTGTGTTT
TCTTACATTTCTGTAGGAGAAAGAAAAGGAGATCCCAGTTCTGAATAACG
ATCCGTGTTGTTAGATTCTTCACTTTTAAGATGAATGAATGAATGAATGA
ATGAAATGAGATTGAAAATGACTGAAAGAAACGACTCTCCAAGCTGCATT
GATCTGGATTGTGATTTTCAGCATTTTTTTCCTTTATGCTTTTGTAAATT
TAACAAAACTATTATTCAATTTGTTCGATTGAGCTTGAGTCTTTTCTTTC
ACTCACTTTCGCTTTTCATTCCTCGATTACAATGTCTTAAATGCATGCAT
CCTCCATTTTTGTATTGAAAAAAATCATCTAAAGCATGAAGTGAAGATTT
AGTGAGAGAATCGAGTCAAGCTTTTTAGAATCATTTCAAGAATCAAAGAG
CAATATTACACCCCTGTCTCGCATCCCCGGTGGAACTTTTTTTCTCAGTA
GGGATAAAAATTCCTATTGAAATCCCAATGGGGATAGAAATTCCTTTGTT
CCAAGGTTAGGAAGTGAATTTTTTTAAACATTGAATTTCGAATGGGAATT
TTTGTCAATCTTTCAAGTGAGTTCAACTGGGTTCCCAGCGGGTCTGTGAC
ACAGGGGTGTAAAATACTTTTTTTAGATAAAAACACTAGATTTCATGTTT
TGTTTATATTAAAAATCTACATTTCATGATTTGAAATCTGCTCTTTATTT
CTTGAAAAGATCTTTTAGTTCAAGTAATGATCATTATTTTAATTTAATTG
CATTAACATTTTTGTAGATATTTATTGTGAATTTTAAGAATAAATTCTTG
TAAAATCAATTTAAAATTTATCCAAGTTACCATCCACCTAAAATTTCTAA
AGTCTCTTTCTGCCTGTAATTTGAATAGCTCAGTTTTGCAATGTTCATCA
ACCATATCTTTTATATTCGCGGTGTAATCTTTGATACTGAAACATACTGG
AAAGGGATTTACTACCAACTCTAAAGTTTAAAAAACAAAGTTTCTTTCTC
AACTTGTGTAACTCTAAAATCAGAAAACACAAGTGAAACAATCTCGTTTG
ATATCTTGTCCTTTACCTTGCCAGGTCTAACTAAAGATATGTCAAATAAT
GTACCAAATCCATGAAATATTATAAACTTTGATATTCTTTTGAATTTAGA
GTGAAACCACAACAGAAACAGGGACAGGTACAAAGACAGCAACCGGAGCT
GGAGCAGCCAGTGCTGGAAGTGCCGGTGCTTCATCAGATTCTGAATCTGA
AGCTGACACCAAATCTAAAGGTGAAAGTTCCGGTGATACAAGGGGTAAGT
AGATTTCAAAGCATGAAAAATAACAGCTTTTTTAAATCATCAATTTATAT
TTCACTTCCAACCACTAGATTTGAACTGAAAGATTAGATATCATTCTTTG
TTGTTAACCAGTTACTTTTTCGAAGCGGGCTACACGGCTTTTGCGAAATG
CAATTGGTTCTTTTCGCATGACGACGGGCTTTCACTGCACGGAGCTGCCT
GCCGTTAGGAAAACTCATTGTGACGTCAGTTTTTCCAAAGAAAAATGAAC
ACTGGGTTATTTCTCAGTACAGCCCTCACAAACCGGTCATTATTGTATTA
ATGTTGTATTTCAAAAGTAGGGCTATTATTTTTGGAACATGATGTCTAAT
CCATCCCATACAACACTACAAGTCTTAACTTTTCACTTACATAATCAATT
CTTTACCACAGCTGAAGGAGGAGCCAAAGGACAAGGACAAGGCTCTAGTG
AAGGTAACACATTCATTTGTTATATCAGCTTTTTTAATTAATGAGTCTAA
AAGATTCTCTCAATGTTTGATCGTATGATAAGAAATTTTGCGAATATCGT
GGCGTCTAAACGCCAACAAAATAGTTGAAAAATTATTTTAAATTCAACAC
TTATCCATAATACTTGGAACTTGTGTGTTCGGTGTTGAAATCTGAAATCT
CTACTATTTGATGTTCAGGTAAAGGTGGAAGCGACTCAGATGCAGGAGCA
GTTTCAAAATCAGGTGCCGGCTCTGAATCGAATGCCAAATCCACTGATGG
AAAGAAAGATAAGAAAGAAGGTGGTGGCGGAGGTGGAGGTGGAGAGAGTG
GCTCCAACGCCGGTGCACAGAGCGGCTCTAACACTGAAACTGATACTAAC
AGTGTGGCTGCACTTGGAGTACGTGGCAATATTGATGCTAAGCAAAATAT
TGGAATAGGAAGTCAATCGTCGACGGGAACTGGAACGAGTACGGGAGCAG
GCAGCGAATCAGAGTCGACCTCAAGTGCAGGTGGAGGAACTGGATCGGGT
GTTTCTATTGGTAACAAACAAAACAAAAAAGATGAAACAGTTCATGATAA
ACAGAGCAAAAATGCCGTGACCGACAACAAACAACAAAAGAAACAAACAA
TGGGTAATGGTCGGAAAGTCAATGTTGATGAAACCCAATCGAATACGAAA
ACAACGAAAACGTATAACGAGCACGAACAAATTACGACGACGCAAACGAA
TACCGACTCTTCTATGGGATCGGGAAAGAAAAATGTCACCAATCAAGAAA
ATAAGAAGAATGAAAAGAAAAATGCAAACAAACGTGATCAAACTGAAAGG
Coding sequence (CDS) from alignment at sc0000141_pilon:633760..637359- >XLOC_043842 ID=XLOC_043842|Name=XLOC_043842|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2472bp|location=Sequence derived from alignment at sc0000141_pilon:633760..637359- (Clytia hemisphaerica_ch_hm2_pilon)
TGTCCACCTCCTCCACCACCATGTCCACCTCCACCACCACCCCCTCCATG
TCCACCACCACCTCCACCATGTCCTCCACCTCCACCTTGCCCACCACCAT
GTCCACCCCCTGCTTGCCCACCACCTCCACCTCCTCCTCCACCGCCTCCA
CCACCACCTCCATGTCCACCACCACCTCCACCTCCACCACCTCCTCCCCC
TCCACCGCCTCCACCACCGCCATGTCCACCTCCCTGCCCACCACCACCTC
CACCTCCACCACCACCGTGCCCGCCACCACCACCTCCATGTCCACCGCCC
TGCCCACCTCCACCATGTCCACCACCCCCACCGCCATGCCCTCCACCTTG
CCCATGTCCCTGCCCACCACCACCAATCCCTCCTCCACCGATGGAAACGA
CCGAAGTTGAAACTCAGTGTCCACCTCCTCCACCACCATGTCCACCTCCA
CCACCACCCCCTCCATGTCCACCACCACCTCCACCATGTCCTCCACCTCC
ACCTTGCCCACCACCATGTCCACCCCCTGCTTGCCCACCACCTCCACCTC
CTCCTCCACCGCCTCCACCACCACCTCCATGTCCACCACCACCTCCACCT
CCACCACCTCCTCCCCCTCCACCGCCTCCACCACCGCCATGTCCACCTCC
CTGCCCACCACCACCTCCACCTCCACCACCACCGTGCCCGCCACCACCAC
CTCCATGTCCACCGCCCTGCCCACCTCCACCATGTCCACCACCCCCACCG
CCATGCCCTCCACCTTGCCCATGTCCCTGCCCACCACCACCAATCCCTCC
TCCACCGATGGAAACGACCGAAGTTGAAACTCAGAGTGAAACCACAACAG
AAACAGGGACAGGTACAAAGACAGCAACCGGAGCTGGAGCAGCCAGTGCT
GGAAGTGCCGGTGCTTCATCAGATTCTGAATCTGAAGCTGACACCAAATC
TAAAGGTGAAAGTTCCGGTGATACAAGGGAGTGAAACCACAACAGAAACA
GGGACAGGTACAAAGACAGCAACCGGAGCTGGAGCAGCCAGTGCTGGAAG
TGCCGGTGCTTCATCAGATTCTGAATCTGAAGCTGACACCAAATCTAAAG
GTGAAAGTTCCGGTGATACAAGGGCTGAAGGAGGAGCCAAAGGACAAGGA
CAAGGCTCTAGTGAAGCTGAAGGAGGAGCCAAAGGACAAGGACAAGGCTC
TAGTGAAGGTAAAGGTGGAAGCGACTCAGATGCAGGAGCAGTTTCAAAAT
CAGGTGCCGGCTCTGAATCGAATGCCAAATCCACTGATGGAAAGAAAGAT
AAGAAAGAAGGTGGTGGCGGAGGTGGAGGTGGAGAGAGTGGCTCCAACGC
CGGTGCACAGAGCGGCTCTAACACTGAAACTGATACTAACAGTGTGGCTG
CACTTGGAGTACGTGGCAATATTGATGCTAAGCAAAATATTGGAATAGGA
AGTCAATCGTCGACGGGAACTGGAACGAGTACGGGAGCAGGCAGCGAATC
AGAGTCGACCTCAAGTGCAGGTGGAGGAACTGGATCGGGTGTTTCTATTG
GTAACAAACAAAACAAAAAAGATGAAACAGTTCATGATAAACAGAGCAAA
AATGCCGTGACCGACAACAAACAACAAAAGAAACAAACAATGGGTAATGG
TCGGAAAGTCAATGTTGATGAAACCCAATCGAATACGAAAACAACGAAAA
CGTATAACGAGCACGAACAAATTACGACGACGCAAACGAATACCGACTCT
TCTATGGGATCGGGAAAGAAAAATGTCACCAATCAAGAAAATAAGAAGAA
TGAAAAGAAAAATGCAAACAAACGTGATCAAACTGAAAGGGTAAAGGTGG
AAGCGACTCAGATGCAGGAGCAGTTTCAAAATCAGGTGCCGGCTCTGAAT
CGAATGCCAAATCCACTGATGGAAAGAAAGATAAGAAAGAAGGTGGTGGC
GGAGGTGGAGGTGGAGAGAGTGGCTCCAACGCCGGTGCACAGAGCGGCTC
TAACACTGAAACTGATACTAACAGTGTGGCTGCACTTGGAGTACGTGGCA
ATATTGATGCTAAGCAAAATATTGGAATAGGAAGTCAATCGTCGACGGGA
ACTGGAACGAGTACGGGAGCAGGCAGCGAATCAGAGTCGACCTCAAGTGC
AGGTGGAGGAACTGGATCGGGTGTTTCTATTGGTAACAAACAAAACAAAA
AAGATGAAACAGTTCATGATAAACAGAGCAAAAATGCCGTGACCGACAAC
AAACAACAAAAGAAACAAACAATGGGTAATGGTCGGAAAGTCAATGTTGA
TGAAACCCAATCGAATACGAAAACAACGAAAACGTATAACGAGCACGAAC
AAATTACGACGACGCAAACGAATACCGACTCTTCTATGGGATCGGGAAAG
AAAAATGTCACCAATCAAGAAAATAAGAAGAATGAAAAGAAAAATGCAAA
CAAACGTGATCAAACTGAAAGG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000141_pilon | genome | sc0000141_pilon:633760..637359 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1714-2343:631 |
| Aaloc | 1672-1710:888 |
| Aaloc | 1525-1668:1452 |
| Aaloc | 1426-1524:3283 |
| Aaloc | 1384-1422:3322 |
| Aaloc | 1279-1383:3436 |
| Aaloc | 1117-1278:3601 |
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