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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000213_pilon:567830..573017- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_043814 ID=XLOC_043814|Name=XLOC_043814|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5188bp|location=Sequence derived from alignment at sc0000213_pilon:567830..573017- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAAACATTGGAAAAGGTATTTTACAAATTCATAATTACATTTTAAGGT
TTTGGGGACACTAAAACACCCGAATAGGAAAATGGACAAAAATACTTACA
AAATGGGGAAAATAAGAACATGTTAAGAACATTTTTATCATCGTGCTTTC
AGCTACAGTGAATCTCACCGCTCACTAATGGCTGTATAATGGAGTATATT
TAACAATACAAAAATGGTTCTAGGAAAATTGCCCCCGAGAAAATTGCCCC
CCGGAAAACTGCCCCCGGAAAACTGCCCCCGGAAAATTGCCCCCTAGGAA
AACTGCCCCCTAGGAATACTGCCCCCCAGAAAATTGCCCCCCAGAAATTG
CCCCCTAGGAAAATTGCCCCCTAGGAAAATTGCCCCCGGAAAATTACCTC
CCCCCCGCCATCTTTTTTTCCACTTTTTATAAAATCCAATGAAACTTCAA
ATGGCCATTGTAGCTGTAAAATTAAGTAGTTTTGAATTACTCTTAGGGTA
CCTAGTAAACGGGGGTCAGCGGGGGTGGATTGGAAAAAAGGCTAAAACAG
CATAATCCGTACAAAAAAGAAGTTTCAGATTCCGAAAAATTGATAAGCGG
AGGAGGGGTTGGATCAACAATGTCCTGGGTAGAAAATTTTCGAAAAATAG
ATTATTTTGGTGGGAACTTTTTTTGGGGAATACTGTAATTAATTTTTTAA
CTGTGGTTGGAATTAATTTTAGCGAATGACAGCGCAAATCTGTTCTATTT
CATTTTATTTTGAGCAACTTTGTTGAATTTCAGGGGTTATTTAGCCAAGA
AAACTGAAATTTTAATTTTGGTGGGAACTTATTTTGGCGAGTTAGTAAAA
ATTAGTTCCCTTAGCTTAAGATAGCATGGATAGGGCGCTTAGGGTTAAGA
AATGGGGAAAGATTTTTTTGAAAGTGATTTTATTGCTCGACTATCTTTCT
CCACCTCATACAAAACTTGTAAAAGTCGTTTTTGAGGCGTCTTTTTTCTT
TAAGAAAAAACTAAAAACTAAAACATGCAAAGCAGATCAATGGTCAGCGT
GAGGAATATAGTAAGAATGAAGTTATCCATTCCATATGACCAAGAAATTT
TGTAAAACCATAAAGAAAATACTTGAATAGCGAAAGAAATACAGTATAAA
ACACATTGAAATTGACTATCGCTAAACAGAGAAAACGCTTTCTCTGTATT
CCATGGTTAAACCACATTATTCCTTATAAAAAGCGTCAACTTAATGAAAA
TTACGGCTGCAACCTGCAACCGTTGGACCAAAATATAGCCCCCAAAATAT
TCTAGATCTCTTAATCCGTTAAGACGCGATCACGTAAAATTGCGTAATCC
AAAATCTCCCAAATGTTGAAAATTGAGTTAGATTTAGTTTCGAAAAATGG
AAAAATAGGGGGCAATTTTCTGGGGGGCAATTTTCTGGGGGGCAATTTTC
CTAGAGGGCAATTTTCCGGGGGGCCGTTTTCCGGGGGGCAATTTTCCGGG
GGGCAGTTTTCCGGGGGGCAGTTTTCTCGGGGGCAATTTTCCTGACACCC
ACAAAATTTACAATCGAGTCAAAAGTTTTTACGACTTTGATAATTCTCAA
CGTCAAAAATACTTCTGTTAACAATATATAAAGATATCGTTACAATAAAA
ATATCTTTCCAACTTGTAAATATTTGTGTTAAAAGTTGAACTGCTGTGTC
TATCCCAGTCAGAAATAAGAAATTACTGAAAATCAAAGCCAATATTGGAA
CCGTCAATATTACGGAGCGGAGTCTAACAGAATTCCGAATTGATTCCTCA
CTGCCGAATCTCTTGACCAAAATCTTTGCCATCGATTCAAGAACAATCCC
AACCCAATTGACCACACCCCAAGTGAACAAAAGTTCAGTTGCACCATGCC
AATATGCCACAAAGCCAAAACATAAAAATGAAGCTGAAATCTGTCTCACC
AATCCTTTCTTGGACCCTCCCATTGGATAATAGATACAATGTTGAAGGAA
TTGGTACAGACCTCGATCAAATGTTCGCCACATTTCCATAAAAGTTGAAG
TCATGGAAACACATTTAGGTGGACCAGGTGGAGTAAAGCCATCAATTTTT
GCAAATAAGCCAGAAAACCGGAAAAATATGATATACTTGATGCAAAATAG
TTGAACGTGAACCCAAGCGATGGACAACGCTTCAAGTCCAGTTTGCGTCG
AAAGTAAATCTGTTTGATGGATCACTTTTGGAGTATACAAATGATTCATA
AACAACTCCAAGCAAGCTGCGTATGTTGTACACGTAATCACATTTTTGGC
AATCTCGGAGATCCTGGATTCCTTTGTTTTGCCGTTGAATTTATCAATTT
CAAAATTTTGCTGTTGAAAGTCTTTATAAGTCATCAGCGGCCCGTTCAAA
AATAAAGGTAGATAAAACATGTAATGAAGGAAATCAGTGAGGTTGTTTTC
TTGTCTTTCTTCCATAACTGAAGAACTATAATCGATGCATCGGATGTAAA
CCATCAGCAGTGAAAATCTGACGATGTCTGCTACTTGAGGACTAATGACG
AAGAAATCTTTCTGTATTTCGAATTTGAAGTTGATTGTATAGATCATGAA
CAATGCGTAGATCCACATCAGAGAACGTCTTTCGACACGAATGATTATGT
AGAAAAACATAATATGTGTCAAAAACAACATCACTGCGTTTGTAGAAAGC
AACAAGGCCAATGCAAGAGCTCCTGCAAGTATAAAGTAAACTTTTCGATA
TTTTGGAAAATTTTGAGACATCAATCTACCAAGGATCGAATAAATGGAAA
AGGCTATACCTAAGGGTAGAGCATGTTCCCGCCACGCGTACCATTCATGA
TCATCTGGTGCACCATCTTCCAGGCCATCAATGTAGGTCAGCTTCCGTAA
GCGATAAACGACGTGAAGAGGATAGAGACAAAGAAATATCCTTAAACTCC
AGATCAAGGTTGTTTCGATTTTCTGAAAACCATTCATTATTGCCTATTTC
TTTACTTTGAAGCTAAAAAAGTTATAAATGATAAAACAAAACCTTGTGGT
AAAATGTCTAAAATATCACATTATATTCCCTTTTTACAGGAATAACCGTT
AAGAGAAATTCAGTACCATATATGTGCGTGTTCCTGTAAGACTTTCAATC
AAAAAGGGTATATCAAAAAAACTTATCGACTTCTTGAAAGGGTCCCAAAA
CCATAGCAGTTTCAAATTCAAAACATGTATTTTAGATACATGGCTTATAT
ATTTTACAAACGTTATAACATGCAATGTTTTCTGATTAGATTTGTTTGAA
ATTACACTTCCTAGTTCCCCAGTTCATCTCCCCATTTCCTTTTTTTCTGT
GAACTGGCAAGTAATTGACAAGGGATAAAGAGTCAAGAAAATAAGGAAGT
ATAAACCGATGCGGGAAAAAAAATCTCTTTGCTATTTATCCAATTACTAT
TCTACTGTTTAATAGTTTCTAAGATTTCTAAGATTTACCGATTTAAAAGG
GACATTTTTTGTCGTGCACCTGTTGTCAAAAATATTTTCCAGGGTACAAA
AAAAACGCACTCAAAAGGGAAGCACAGACGCGTACCATACCGTAACTTTT
GCCTAGGTTTTTACACCTTTCGAGGGTACTGGGATTAGCCCTGCTAAAAA
TCTATTTATCTTAAAGACTTTTACAAAATGATGAACCAGAAACATCAATA
TAAAAAAGTTTACTGTCTTGTAAGGCTTTCAGCGTCTTATTTTGGCCCGG
CGAAATACACAAAAGAAAATACGATTCGCCGGTTTAAAAATTCGGCTCAC
CGCTTTAAGTAAAAATTCGCCCAAATCAATACAGTGGGCTTGCTGAGAAT
ATTGGCCTATAATCTAGAATTTGCCAGCCTTTCAAAAACAGAGAAAAACC
CCTGGTAAGGCTATCGGACAGTTTGCTGAAAAAAAAACGGATCAGTAAAA
ATCCTTACGAATAAGGCGGATTAATATTTAAAAAAAATCCTGCTCCACTT
TTTTTCGGACACACAATGTAAACATTCATCTGCTTTCTCCAATCGTTTCT
TTGAGATGTGATATATTTACCTGTCATAACCAATGCTTTCAGCAATTTTC
ATAAAATGTGTCAGATAGATAGAGGACAAAAAACTAGGAAGTCTAACTCG
CGGATTACACTAATCAAAAGCTGCTGCAAATTTTAAGAAGAAGTAAAAAA
GACATCAAAATTATATTCTCTGACTATTGTTCCCACTGTGTTTAAGGAAC
GCCATTCAGCTGTTTATCCAATTATCTACTTCTAGGGAAGATTTTTGCTG
AAAGTTGGTAGAATGATAAGAATGACGAGTGATTACTATCACGGCTCGTA
TCTCTCTAAGGGAATGTATGTAGCATTGCATGCATAGGCGGTTTTAGACC
CTGTCGAACTTATCAGATGGAGAGATTTATAATTGTCATGTTATTGTTAT
TTTGACGAGTGTTGCACTCCTTCGCATGTTTCCGACCGTACTTGCTCTAT
TTTCTTAAATCCTCCAGTGCATTGTTAACTTGCCTTTACCCAGACAAATC
TTGTTTCATGCGTTACGCGAGACAATAACAAGAACAAAAAAAAGTTAAAT
ACTTTTGTATAAGTCCTTTCTAATAGCCGGTAGACTACCAACGGTTTTAG
TATAAATACCCAACTTTCCAATCAAAATACTTCATACGATTCAAGTTTAA
GCTACAGCAAAGATACTTTAAAAGGTAGGTGTCAATTATCTCGAAAATTT
CAAAAACTAAGGAATTAAATTTATTAATGCCGTATTCTAACTATCATATC
CTTGAAATTCTTTTCAGACTGTTTTGGTACTACATATTCTTAAAACTCTT
TTTAGTATTCACAATAGTATTTTTCTCATATTTTTAGTGCACGAAAAGTT
CACGTGAGAAAAATGAAGATCATCTTGTTATTTGCAACTATGGCACTATT
TTGCTGGAGTGAAACTGAGGCGTGTGGTGGAGGCGGTGGTAACAGTGGGA
GATCATGGATTGGCGGTTGTTGGACGACATGGAGCCGCTGCACGCGCTGG
AGTAATTCTTTGACCGGAATCGCCTGGAAGTCGTGCAATGACCGGTGTAA
AGAAATTGGCAAGTCTGGTGGTAGCTGCCAACTTTCGAGATCGAATTGCC
CGGCATCGAATAATGCTTATCAGTGCCAGTGCTATTAA Coding sequence (CDS) from alignment at sc0000213_pilon:567830..573017- >XLOC_043814 ID=XLOC_043814|Name=XLOC_043814|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=636bp|location=Sequence derived from alignment at sc0000213_pilon:567830..573017- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAAACATTGGAAAAGATGAAACATTGGAAAAGTGCACGAAAAGTTCAC
GTGAGAAAAATGAAGATCATCTTGTTATTTGCAACTATGGCACTATTTTG
CTGGAGTGAAACTGAGGCGTGTGGTGGAGGCGGTGGTAACAGTGGGAGAT
CATGGATTGGCGGTTGTTGGACGACATGGAGCCGCTGCACGCGCTGGAGT
AATTCTTTGACCGGAATCGCCTGGAAGTCGTGCAATGACCGGTGTAAAGA
AATTGGCAAGTCTGGTGGTAGCTGCCAACTTTCGAGATCGAATTGCCCGG
CATCGAATAATGCTTATCAGTGCCAGTGCTATTAATGCACGAAAAGTTCA
CGTGAGAAAAATGAAGATCATCTTGTTATTTGCAACTATGGCACTATTTT
GCTGGAGTGAAACTGAGGCGTGTGGTGGAGGCGGTGGTAACAGTGGGAGA
TCATGGATTGGCGGTTGTTGGACGACATGGAGCCGCTGCACGCGCTGGAG
TAATTCTTTGACCGGAATCGCCTGGAAGTCGTGCAATGACCGGTGTAAAG
AAATTGGCAAGTCTGGTGGTAGCTGCCAACTTTCGAGATCGAATTGCCCG
GCATCGAATAATGCTTATCAGTGCCAGTGCTATTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000213_pilon | genome | sc0000213_pilon:567830..573017 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 19-318:301 |
| Aaloc | 1-15:5189 |
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