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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000256_pilon:165910..174612- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_043782 ID=XLOC_043782|Name=XLOC_043782|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=8703bp|location=Sequence derived from alignment at sc0000256_pilon:165910..174612- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTTCAAGTATCTGACACTTCCACTGTTACTTGCAGTACTATTATTACC
AACGAGTCTGGTATTTGTTGGCAGAGGTAAGACTCCAAGGAAAATAACTT
GTAAAAGTTTATATTGGGAGCTCTTTTATGATACCTATGTCAACTCTGTC
TATTTTTATGATATTTTGTGATATTACTATTCCATTTCATCTTTTTTCGA
GTGCTCACTGACAGGTAGATAGCTATGCATTATTAATCAAACAGGATTAT
TTCAATCAATTGATCACTTTCTATCTAAAAAATCTGACCCTTTTCTAGTC
AGAAAGTCAGAAAATTTCTTATCAGCATTCGGTCGATAAGCTTCAGACCA
CCTCCCCCACGTGCGTTTGCTTTGGGAACGCGAACGCGAACTACCAATGT
TTTTAACTTTTCAATATATATATCACCAGAAGTAACAGATTTTTTGAAAT
TCTGTAAAAAAGTCCAAGTTCCTTAATAGTTTTACTATGTTCTCACGTGC
GTTTGCGCAGGGTAAAATGGCGAAATGCGAAAATCGATTTTGGCAAATTT
TTTTTGAAAAACGACCCTACAGGATTTGAACTATATTTTTTTATTCCATG
AAGAGATTACTGTCAAATAAAAAATATATTGACCATGAATGGGTAAGCTT
TCTAGAAATCCAAACATAAATTGCATAGCTTTTACCAAAAAATAGCACTT
TAGGATCAGAAACAGTCAAAAACCAGCTTTTTCCAATTTTCTTTGAGTTA
CAGGAATTAAATCCTTGTTTGTTTTGATCTGAAATTTTCAGTAGAGGTGG
CCAACATGGTTCCCTTGCTCATATATCAGGGGGGTGAGACGGGGGAAAGA
GAATTAAAGTTTCTAAGTAAAATATTAATTATCACCCAAAAAAGTGCCTA
GTTTTCTGTCCATATCTTTTAAATAGATTGTCCCAGCCTTATCCCTCTTT
CAGTAAATTGAATTGAATTGAATATATTTTCGCTGCAACACAGCAGGATA
ACCCCTTACAAAAAAAAATAGATTTCTCTAATACAATGGGGAACCTAGAA
GAAACTGAAAAATTATTACAGAACTAAAGAAAAAATGAATAAACGATTAT
CATAATATTAATAGTGACAACAAAATAGTGAATATAAGAAATATTTTTAC
TTTTATTTTATGACAATTTCTTTGAGTAGATTTATCTATAAAGTTTTTCC
TGTTACACCACCCACCCCTCCCACCCTGGAAAAATACACTAAGTTCACGC
ACACGCAATACACGTACACACAGACACACACACACACAAAGATTATTCGT
CTTCAGCTTTGTATTTGTCTAAATAGAATTTTGTAGCTAAAGATTTTAGT
TCATCAGTATCAAGGTTGTGAAAATCAGTGTCAGGATGATTTATTAGTAA
CTCATTCCATTGTTTTGACGAAAGACGAGAGAAAGAGTTAAGTCCAAAAT
TTGTGGTTTTGACCGCTTCCTATACCTTTTGTCCTTCAGAAAAACCAAAA
ATATTGGCCTTAATTGCTTGCTTTCAGTTCCTGTAGCCAATAGTGTGACC
CCCTGTATTTCTATTTTAATTCGCGCGGGTTTTTAATAGAGATGTCACAT
GACTCAAATCCTGCAGTCTTATTGGACTAGAGAAAGTAAAAGTGAAATCG
CGCGATCTGATTGGATGAAAAAAAGACCGCAGGAGCTGGAAACAAATAGA
ATTCTCTAGAATTCTTTAGAATTCTCATTTGAAAACAAGATGGCGGCAAG
AAAAGCATGTCTTTTGCTTTGGACGAAAGGTTGTAAATTCTGGTTGATTT
TAAGGTTTTATCTTATCTTATCTCATTTACTTTAATTAGTAGAGGCTTCT
TCAATGTTTGGGGAAGGTAAGACTATAAAAGTTATTTGTTTTTCGGTGGA
AAAAAGTGTTTAAAAAGCATTTTTTGTGTTCAAGGTTTATTTTTCTTCGC
AAATTTTTGTCTTGATTTTTTCACAGAACATAGTAAAACTATTCAGGAAC
TTGGATCTTTTTACAGAATTTCAAAAAATCTGTTAGTTCTGACAGGGGGG
CACGCAGTTACTACAAGACAGTATGACACTTACTACCGTGGTGGTACTGT
ATTTAGAAGTTATGAAAACAGTTACTACACAGTGTAGTAACTGCTGTTTG
GGGGTGGTGCCGAACACTTTTGGTGTAGTAAGTGCTTATATTTTAATTCT
TTTTAAAGAACTTTCAAAATTTTTCACAAAAAATGAATTTTTTTGTGAAA
AAATTCTTTGTTAAAAAAAATAATTTTGTTATAAATGGACGAAAAAAAAT
TTGAAATTTTTCTCAGACCCAACTTTGAAATTATGCTTTCCCTAATTATC
ATTAAAATGTTCTCAACAGCTGTTAACCAAGTAAATTAAAAGAAAATCTA
GCACAAAAATGACTTTAGGTTGAAAAATAATCGCAATTTAGGGTAATTTT
GAGCATGTTTTTGATGATATCACTCAAAAACAGGGGTGGTACCTGGAAAT
CTTTTCTGAAAACAGTTACTACCAAGGTGTATTAACTGCAAAGGGTGGTG
GTCCTGAAAAAGAGTGTTGAAAAAGCACTTACTACACATCATGTCTTGTA
GTAACTGCGTGTCCCCCCCCCCTGGTTCTGGAGATATATTGAAAAGTTTA
GACACGTTCATGTTTCGCGTTCCCAAACCAAACGCACATGTTCTGTGAAA
AAATCATAACCATCAGTGAAATACTCGTTCATCTATTTTGTGTTTAAGAT
TGAAGACAAAAATTTGCGAAGAAAAATAAACCTTGTGCTCAAAAAATGCT
TCTTTATTAAACACTTTTTTCCACGGAAAAACAAATAACTTTTATAGACT
TACCTCTCCCAAACATTGAAGAAGCCTCTACTAGTTAAAGTAAATGAGAT
AAGATGAGATAAAACCTTAAAATCAACCACAACTAAGGCCAATATTTTTG
GTTTTTCTGAAGGACAAAAGGTATAGGAAGCTTTACTGAAGGCGGCATAA
GGCTGGGACTAACTATTTAAAAAATATGGGCAAAAAAAGGCATTTTTTGG
GTGATTATTAAGATTTTACTTAGAAACTTTAATTATCTTACCCCCATCCC
ATCCCAACCATGTTGGCCACCCCTACTGAAAATGGAAAAAAAGAGTTTTT
TTATCAAAGTCAATTCAAAACTGTACTTTTGAAGTTGAAAATTTGTGCAC
GAAGGTGAAGGCAAGTAAAATTGCATGCTTTCAGTGGAGTTTGTGGACGA
AATCAGAATGAAATTGGCTGAAAGGATTCTTGTCCCAATATTTGTTTTTT
TATCAGTATGTAGCTCTATCAAACACAATCAAAAGCAATCCGATTTCAAT
CAAATCTGAAAATTGTGATAATATTCCAGACCTGATCATTACACCTTTCC
TGTAATTCAAATTTCTCAGAAATGGTCCGTGGAAATGTGCGCTCCATTGT
TGTGTATAAAATTGATTGGCAGGTAAACATTCGTGGTTTAGCCTGGGGCT
AGGGAAAGTAGGTCTTCAGCTTTAAACTTTTGATAGTGATCTTTTTTGGC
AAAAAAAATTTCAGCATGGTATAATTATACAGTTTTTCAGTAACCCCCAC
CTAAATTTGTAAAATCTTCGAACCCCCACCTGAAAATTCAGTTTATCCTT
TTTTCCTTTAGGAAACATATGTCATAGGTAATGGATATAAAGAGATGTGC
TTTGTTTGAACACTCACTCATTAAAATTTAGTCATCTGTTTATATTTTTA
TCTAGTATACTGGCTAGTATAGTATGTGGAAAGTTGAAAAAGACAAAAAA
GTACAAAATCAAACATGGTTAAATACAGAAAACTTGACAACCCCCACCTG
AAAAATGTTACCCCCACCTATATAGGGTTACCCCCACCTGAAATTTCTCA
TCAACCCAACCCCCACCTATTTTTAAAAATCTGAAAATCCTCAACCCCCC
CCCCAAGAATCCAGGGGGGGGTGCCCACTATGTTTAATTTGAGAGGATTT
TGATTGTCAGAGCTTAAGAGAAGCTAAAAACTAACTTTCCCTAAGGAAAC
ACAGGCAAAAACAGGTTTGTTTACCTCCAGAGACTAAACAGTGGAGAGTA
TCAAAATAATGCGCGCGCATTAGTTTTGCGAGAAAAGGGAAAGGTGTATT
AACTTGTTGATCCAATGGGCAGTTCTAGTTATAGTCAGTTACCCCCTGTG
GAAAACATAGATTTTCCGTAACAATTCACCTTTGAAAAACTTTAGGATAA
CCGTTACATTCAAGATTTTTTAGGGAAAATTCCTAGATTTTCCAATACCT
GACAAGAAAATAGAGCAAATCTTATGGATTTTCCCAATACTTGATAGCTA
AATGAGGAAGAAAGACCCTGAATCTTCCGTACCCTGTCTTAATTTTTTTA
GATTTCCAAGTTAAAAAAATTTCCAAAAATCCCTGTCGTCCACAGGGGGT
AAATCATTTTTTTCTTAAATTTCCGGGCAAAAATGTCAAAAATATAACAG
AAAAAACTCTTTTTTGGCAATTTTTTGAGATTTCATCAATTGTTTAATGT
ACTTTTGCATTTTATACTATTTTGCCACTTTGTCAATTGTTTTATTAAAA
ACCTTATTGAATTTTTTTTCGTTTCTCTTCAGTTTCTGCTCAAGAAGATG
CAGTAGAGGATGAGGTTGTAGCTGAGGAAGGAGAAGATTCCAAAGTGGAA
GCTGAAGATGAAGAACCTGCTGCCGAAGAAACCTCTCCCACTGGAAAAGT
AAGATCCTTTTTTAGTTCTTGATGACATTTCAGCTGGCCATGTCTAAGAA
AGACAGGATGTTGTCACTCTTTCAGCCAAAATGGCATTTTTCACATTGTT
TTCTAACCAAAAAAACAAAAAATGGAGGAGAACCTTTGCAAAAGCTGGGC
TCGACAGGATCCATTTTCTGACAAAATGGTCACTTAAATGGTTACAATGA
AACAGAAAGGCAATTAAAACCTATAAGCTATAAACAAGCGTCTCTTTAAA
ACAAATTGCAACATTTTCAAATACGTAAATAATATTAGTTTTTGACATAC
ACACACAAAGGTTTCTATGTGTAATCTGTCTAATCGTGTTCTGACACGGG
ACTTTTTTTGGGGCATCATCCTGTACAGTTTGGGCAATGGACCAGTGAAG
AAAATGTCTACCAAGTTGTTTTTGGGAATCTAGTTTTGTCCACCCTTTCT
ATCTTGGTACAAATTTGAAATGTGCCTTCAATTTAGGTAGACAGCCCCTG
AATGTCCAGGAAATACCCTGTAAAATCCTGCCATTTTGACCAGAAAGCAA
AGTAACACCCAAAATTCAATATTCTTTAACGTTTTATTTTTACATGAGAT
TTTCATATCAGGCACATGTTTCCTGTCTATTGTTATCGTGCTAATATAAG
CAAACAAATGTATTTCTTTTCCTTCTTTTGACCAGGGGGGGGGGTCAGTA
CTAAAATGTAAGACATACATGAGTACTAAAAGGATTTTCGCTAATTTTTG
ACATACCCCCACCTATTTTTCGAAAATGTTGTTTTAGTACACAGTGTACT
AAAATTATTTTGAGCAATTTAACATAGATACCACCCATTTTTTGCCCTTT
TACGGCTTTAAATTTACCAAAATGGGGTCATTGTTACAAACCTAGTCGAA
TTTAGTGCATCAATCTGCAAAATAATATAATGTTATTACTAAACTGTGCT
AAACTGTACATAAAAATATTTTTAAAAAATATTTAAAAAATTAGAAAAAT
TCTGAAAGATTTTTGAAGATTTTTTCGAAAATTCCTGAAAAAAAAATCAA
ATGTTTTCCAAAACTGTTAAAAAAATGCTCCATTTTGGCTGATTTTAGAA
CAAAATACTAAGATTTTTCAAAAATTTCTTTAAGGGACCACCCTTTTTGG
TATTTTAGTACACATGGTAGTGTACTAAAATTATTTTTGAGCTTTTTTGC
AGTACCACCACGTCACTAAATGTCATGATGTCTGAGATTTTAGTACCGAC
CCCCCCCCCTGTTTTGACCAATCTTGCTCCATATCCGTGTCAATTTATTA
TCAAAAAGCTTGTAAATTAAAGTAAGCATACAATCTGAAACGATATCACT
CTCATTTAAAAACAAAACCTTTAATATATCAATATAGAATTCTCTGGAAA
TGGTAAAGGCAAAGGAGGTTATAAAGCCCCTACCAAAAAATGTCCTAGAT
ATTTACCTCCCTTGAAACATTTTCCATTTTTGGGCCATTACTGCTTTTTT
AGTCCAAATACCTGCATACCTGTTGAAAATCACAGTGAACCTGTTGAATT
TACAGCCTTGCCCACCCAACTTACTAGTAATAACTTGTTTTTGACTTGCC
AATTCAACCACCCAACCGTCAGTGGTCCCTACAACCTGCATCATTTTTCA
GCTTGAGATCTCTTTCAGATTCTGGCTTACTTTTCAACAAATACTTTTAT
TTTTTAAGGGGTTCCCTCCAAATTTGCGCAAATTTTTGCATGCTACCTCA
CATTAATGGACTAGGAAGGTTGTTGTTTGACACGTGAGATTAAATGAAAC
CTTCTCTTTTTTTAAAGGATGCAGAGGATGAAGAAGAACAAGTTGGTGGA
GTTAGAATGACTTCAGATGCCGTCACCTCCGTTCTTTTCCCTGATTACCC
TGAAAAAGGTTTGTACCCTTTGTTTCAACTTTCTTTTAATTTCTTTAACA
GATTTCATTTCATAGGTTTTTCAATTGGTTTTGTCAAACTGTATTTATTG
TAATACATCTGGGATTTGTTGGCCTTAAAATCCATCATGAATTACAGGTT
TCTACATGATTTTGAATACATGTCTTTTTTTAAGCATACTTTTTTTTGGA
ATAAAGGCTTGGGAAAAAGGATTCAAAAAGAACAATGAATCTTCCCAAAT
GAACAAGCAATGACCAAAACTGACTGGTATGCTTGCTTTTTTCACCAAAT
CCACGTGTTAGTATGCTTATAAAAAGAGGATACGCGTCAAATTATGAAAA
CATACTTTTTTTTAAACGCTCCATTTTCTTTTTCACAGATTTACCTGCTG
GCAAACCACTTCATCTTTTGGTTGGTCTCCAAAACAAAGGAGAGAAAGAA
TTCACCATCCAAACAATCGATGCTTCGTTCAGATATCCACAAGATTATAA
TTACTTCATCCAAAATTTCACTGCTATTTCGTACAACTCAGTTGTTGAAC
CGGGAAGTGAAGCAACCTTTAGATATTCATTTTTCCCACATGAAAGTTAT
GGTGGACGTCCATTCGGTTTGACCATCCTCATGTTCTTTAAAGATACCGT
AAGTTCATTTTCTTTCTCCTTGGGCTGGTGATGAATTCTTATTTTCATTT
TGAAAAATTTCACTTCAGCTTTGTATGTTTCTGTTATTATCCAAAGTTTG
TCAAGCAAAAGAGCGGAATTATTGTGTTTTTGCTTACTTTATTGAGATTG
ATTTTTCGAAATAAAGTCACCTTTATTATGAGATGTTTCTATTGATTTCT
ATCTCATCTTTTCTTGTAGGATGGCAACCAGTACGGTGCTGGAGTTTTCA
ACGAGACCGTCACCTTAAAAGAATTAGATGAGAATTTCGATGGAGAAACA
TTTTTCCTTTACGTTTTATTGGTTGCCGTTGCTCTTTTGGTTGTATTTGG
TATCAATTACGTCGTCTCTAACAAGGTAGGGGTTCCCCTTTTACAAATAT
CTCTAAATAAGGCCTGGTTGTTGAAAAACCTCCTGAAAACTAAATTATTT
TCAATAGAAAAATAAGAAGATAGAATTTGGTTACACCACCTTTGCTGTTG
CGAGGATTTCATTTTGATCATCGTGTAAAATTTAATTCTAGCATTATAAA
TTATGGGATCTCAAATGATATTTACATCCAATTTTAATTATTTCAAACTT
ACCATACCATATTTTGCACTTCCAGTTCAAAAGATCGTCTTCCAAACCTA
AAACAGAGACTGGGACGACCAACGACAAAAATGACGTCGATTACGATTGG
TTACCAAAAACCACCACCGATTTCAGTAAGTTGACAATTAGAATATCTTT
GGTATGTTTACACCCAATACGTTGCGTTTCAAGCGAAATCAGTCATTTTC
TTGCCTTTTTCCCACCTTTAGAAAATGCCCAATTTAGTGAATCGCGAAAT
TTAATACAGGTGAAAGTTTCCAGAAACTGGCAATCGCGAAATCTAGTACA
CGCGAAAAACGTCTCCTCGAAAAAATTTCGCGAAATTTTGTAACACGCGA
AATATAATACCAATAAGTTGAGACCAATTTAATTTGTTGTTCTACGGGCC
CGACCGACTCTAAAATCTGCTAAAATCAAAAAAATAATAATATCGAATTT
CCACTACAATATATTTTACACACTAGTTAATTGAAAGCATTCCATACACT
AAAATTTTATTATGATCTTCATCGAAGATAAAACACAAAGTGAATTTTGA
TCCAGATACTTTTTGGAATATTTTCTCGGTACCTTACCAACCCTGATAAA
TGAAAAATTTATTCTTATTTTGCCGACCGACCGACCCATATTTTTCTAAC
GATCTGTCCGTAGAACAACAAATTAAATTGGTCTCGCCTAAGGTATTCAG
CATTTAATCTTGCATTTCTGTTTTATCTTTAGAAGCCTCACCCCGACGTC
AGTCACCAAGGCAACGACGCGTCAAAAGATCGACCGGATCCGGCGAGGAA
TAA Coding sequence (CDS) from alignment at sc0000256_pilon:165910..174612- >XLOC_043782 ID=XLOC_043782|Name=XLOC_043782|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1740bp|location=Sequence derived from alignment at sc0000256_pilon:165910..174612- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTTCAAGTATCTGACACTTCCACTGTTACTTGCAGTACTATTATTACC
AACGAGTCTGGTATTTGTTGGCAGAGATGTTCAAGTATCTGACACTTCCA
CTGTTACTTGCAGTACTATTATTACCAACGAGTCTGGTATTTGTTGGCAG
AGTTTCTGCTCAAGAAGATGCAGTAGAGGATGAGGTTGTAGCTGAGGAAG
GAGAAGATTCCAAAGTGGAAGCTGAAGATGAAGAACCTGCTGCCGAAGAA
ACCTCTCCCACTGGAAAATTTCTGCTCAAGAAGATGCAGTAGAGGATGAG
GTTGTAGCTGAGGAAGGAGAAGATTCCAAAGTGGAAGCTGAAGATGAAGA
ACCTGCTGCCGAAGAAACCTCTCCCACTGGAAAAGATGCAGAGGATGAAG
AAGAACAAGTTGGTGGAGTTAGAATGACTTCAGATGCCGTCACCTCCGTT
CTTTTCCCTGATTACCCTGAAAAAGGATGCAGAGGATGAAGAAGAACAAG
TTGGTGGAGTTAGAATGACTTCAGATGCCGTCACCTCCGTTCTTTTCCCT
GATTACCCTGAAAAAGATTTACCTGCTGGCAAACCACTTCATCTTTTGGT
TGGTCTCCAAAACAAAGGAGAGAAAGAATTCACCATCCAAACAATCGATG
CTTCGTTCAGATATCCACAAGATTATAATTACTTCATCCAAAATTTCACT
GCTATTTCGTACAACTCAGTTGTTGAACCGGGAAGTGAAGCAACCTTTAG
ATATTCATTTTTCCCACATGAAAGTTATGGTGGACGTCCATTCGGTTTGA
CCATCCTCATGTTCTTTAAAGATACCATTTACCTGCTGGCAAACCACTTC
ATCTTTTGGTTGGTCTCCAAAACAAAGGAGAGAAAGAATTCACCATCCAA
ACAATCGATGCTTCGTTCAGATATCCACAAGATTATAATTACTTCATCCA
AAATTTCACTGCTATTTCGTACAACTCAGTTGTTGAACCGGGAAGTGAAG
CAACCTTTAGATATTCATTTTTCCCACATGAAAGTTATGGTGGACGTCCA
TTCGGTTTGACCATCCTCATGTTCTTTAAAGATACCGATGGCAACCAGTA
CGGTGCTGGAGTTTTCAACGAGACCGTCACCTTAAAAGAATTAGATGAGA
ATTTCGATGGAGAAACATTTTTCCTTTACGTTTTATTGGTTGCCGTTGCT
CTTTTGGTTGTATTTGGTATCAATTACGTCGTCTCTAACAAGGATGGCAA
CCAGTACGGTGCTGGAGTTTTCAACGAGACCGTCACCTTAAAAGAATTAG
ATGAGAATTTCGATGGAGAAACATTTTTCCTTTACGTTTTATTGGTTGCC
GTTGCTCTTTTGGTTGTATTTGGTATCAATTACGTCGTCTCTAACAAGTT
CAAAAGATCGTCTTCCAAACCTAAAACAGAGACTGGGACGACCAACGACA
AAAATGACGTCGATTACGATTGGTTACCAAAAACCACCACCGATTTCATT
CAAAAGATCGTCTTCCAAACCTAAAACAGAGACTGGGACGACCAACGACA
AAAATGACGTCGATTACGATTGGTTACCAAAAACCACCACCGATTTCAAA
GCCTCACCCCGACGTCAGTCACCAAGGCAACGACGCGTCAAAAGATCGAC
CGGATCCGGCGAGGAATAAAAGCCTCACCCCGACGTCAGTCACCAAGGCA
ACGACGCGTCAAAAGATCGACCGGATCCGGCGAGGAATAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000256_pilon | genome | sc0000256_pilon:165910..174612 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 802-870:70 |
| Aaloc | 700-798:779 |
| Aaloc | 544-699:1185 |
| Aaloc | 286-543:1664 |
| Aaloc | 193-282:2137 |
| Aaloc | 79-192:4070 |
| Aaloc | 1-75:8704 |
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