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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000072_pilon:582633..586422+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_043602 ID=XLOC_043602|Name=XLOC_043602|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3790bp|location=Sequence derived from alignment at sc0000072_pilon:582633..586422+ (Clytia hemisphaerica_ch_hm2_pilon)
atggATGATAAACCTTGCTTGTTGTTCTGCGATACCTTCGTTCATGAAAG
TCACGATGTATGTATTCTTTTATTTAGAACTTTTTGCTCATCCATACACA
TTCATTTGTGTTTTTCTAATGGTTGTGATTCATGATATATGCACCGTTGC
AATGTTTTCATAAATCATGTgaatctttttggacctaccccggtggggta
gaggtcctataaattaaccgatgtccgtccgtccgttcgtccgtctgtta
ccagcttttctcaggattggctcattaattttttatgatttttggcacaa
tgatgcaaaatggcaatacccaaaatgtgacggagcccgattttcgaaaa
aaaaaatatttaggcaaatttgggccaaaaactgcctaaaaatagggttt
tttggactttgtgcaaaatcctgtcattaggtttttctgattttttgtac
aaagatggaggactagattctctaaagaatggctgaagtggtttttcctg
gaaaattcttattcgccttcaaaaacggattttcgtattttggggaaatt
ccctttaaccaaataagaaaatatagctttactcaatgttgactcataat
tttttctgattttttgcacaatgatgcaaaatgacaatacctaaaatgtg
acgaagcccgattttcaaaaaacatttttttttcggCcgaaaatgccgga
aatatgccggaaaaactgttttttcggcattttctcaagattttatcatt
ggttttttctgattctttgctcaaagatgcgtattaacattgcccaaaac
atggccgagttcgatttttgagaaaaaattttttccggttgaaaatgccg
gaaatcgccgtgtttgcagattttcattggattttttccttatattcatt
tctatgttttttacacaaaaacattattgataacaatgctcaccatcaag
catgattcaattgtcaataaaactgatttttgcgaccagaactttctatt
tattttttccctacaacccttccctctccccccatcaacaatcaatgatg
aatttattgcgttatgcattttcgctaaacgctatattttctgactgatt
ttttttcatttttctcctcgcattgctatctaactttcatcatcaggtag
gtccattcagcatctagcttgtctGTTTTTATTTCTACCCAAATGTcatt
gcaaccaatcagctgttgtaaAAGTGGCGTAATGTCAAAATTAATTGCAG
GGGAACATGATGCATGATCAAAGATCAGCTGTTTTTCTACATGCAGCAAA
TAAAAGGTTTTACTGGGTCAAAACAAAAGACAAAAAGTTCTTTTAGAGAA
GTTTAAAGTTATTCATTAGAatacttcttcttcttctggccaaaaaatta
agaatatagtTAAGAATATCATCAACAAGGAATTCAGCAACCTAAAAATG
CcgtttttatagtatttttaacTTACCAATTATCCCCAATTGAACTTTCA
CATAAATGCCATTTTATACTTCAGGTGTGTGTATTACCTGTTCAATTTAT
GTTGAATTTGGATCCTAACATAAGAATAccttaagaacatttaagaatga
ttttcccccaaaaaatacaattcttataaaaaaagcgtgtaagtaaTTTT
GACTCTTCGTTTCAGGAAATTCAACTGGATTTGATTGGATTTGCTCGACC
TGTGGCAATCTCAGAGATTAGAGTCATTCCAAAAGGTTGTAAAGTTCACC
CAGAAATCAATGATCGGTTAGGGTGAGTATATAATATAATTAGTTCATAG
TATCTAACAGCATTAATACTGGATACCTAACCCTGTAAACCAGATCCTTT
TTCCTTATCGACCGCCGAAGGCGGTTAATTTTCCGAGCTGTATACGGGTA
AAAaagttggattcaaaatttgtcacaactgtgctatccttttgaatatt
ttaaaatttgactcgcCCATTCTGCacattttgcagaattttgtcggtta
aaggtttgagcagctgagacaaatttgagatatttgtagAATCGCTGGTT
TTCTGAAATGAGTGGCGTTTTACTACggagataaaaaaagcattttttcg
gaGATAACGATGTTAATCATAAATAGATGAAAAACATGATGTGGCGCCCC
GCTAGGGAGATAAatgttaagtaaataaaaaaactttaagtatTTATCAG
CTTCTGATTCAAACCATAAGTGATTAAACAACTCAAAATATACTCACCAA
GCAACTTAGCATAACTGTCATAATGTGTTAGCGTATTGTTTacataagca
tacaaaaatccgaaaacaagCTCCGAGATGCTTAGGttcaaagcttaata
aggctgaaaaatgcttcaggggatgcttaaatcttaaacataaatttagg
gaaatactgaaaatccgtaaaattccagccaaaatcaggaaaaaaacatt
tctcgTAGGCATATGTTCAAGTTAAATCACGCAAACGAGAGTGTCGAAGT
GGATCATTGTCTAAACCGatgaattcttcatcaaatctAAGGCGGTCGTT
ATCCAGTGATGTGAGCACTGTTCTAGTGATTATTTTATAAGGGTTGATAA
GTGTATTGCTatcatatctttttatttaatactctcaaagaaatcatttg
caaaagatattgatcacaataaaacaaaaaaagtaaacatgACTGTACTC
TTAGAGAGAAAGTAAAAGAAGTCTGAAAGACATATGTAACAAACTCAAAA
ATGAATATGTGATGCAGTTGAGTCTATTCaaatatttctgtaattcgaat
ctaaATCATCGATCTCTTCAGCAGCAAAATGGTTTAAAATACTATACtcc
ctgtaattcgaatctttctctaaatcGAAGAAGATTCTTTACCCCTTGAA
TATCATATAAGAGGTAGACTGCATCACTGTAACAAATAACtttgttggtt
ttttgtttagttaacaagttttagctggtttttatttcacttttattttg
agtattacttttttaattttagtgaAACCAAACCATCGTCTTTCAAATTG
GAATTATTCATCAAGAATTTATCTCAACCAAGAGCAGCAGTATTTGAAAA
GTTGGGGATGTAAGATTTTTATGATTGGTTTacctttgtttcatttttaa
gttCTAATCATCAAATTGGAGGGCAGCATACTGGTTGGTTGGTATTGGTA
CATTCTGTGCTACTGGTTGATAttaaatacacccccttctcatagacctg
GTTGAACCCCTTCCCACCTGAAAAAtagctgaaaataatcaaatcaacaa
aatcctcactgcaaaatgttgtgctatttttttcatcttcactgaatttt
ctgacttgaaaacaatggaattcaaattccTAGCCATAAAGAATACGGGA
AAATCGATCTCCGTCGACTTTCAGaccattatttttacccccattggctg
aaaaaatcctaccagggCTGTGAGAATGGGGTGCTTAAATTAATGAActa
attaaaatcttttttcgaaaatcagaaGCTCGAATACTGCAGTAAGAAAC
TCTGTGTTTAAACTTTCCTTTCTGTAGACAAAAATCCGACCATTTGAGAT
AAGAACATGATTTCCATCTCCCCAGTTAGATTGATTTTTGACAGAAGATT
ATTTTTTCAGTCCAGACTTAAAAAACCTGGTTGCAGCACTTACAACTAAA
TAGTATAATAACAACCTCTATTTAAACTGTTCTTTCAGACTTGATTATGA
AGAAGGGAAAAGCATACAGctcatttcaaattcaaaggtg Coding sequence (CDS) from alignment at sc0000072_pilon:582633..586422+ >XLOC_043602 ID=XLOC_043602|Name=XLOC_043602|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=606bp|location=Sequence derived from alignment at sc0000072_pilon:582633..586422+ (Clytia hemisphaerica_ch_hm2_pilon)
atggATGATAAACCTTGCTTGTTGTTCTGCGATACCTTCGTTCATGAAAG
TCACGATatggATGATAAACCTTGCTTGTTGTTCTGCGATACCTTCGTTC
ATGAAAGTCACGATGAAATTCAACTGGATTTGATTGGATTTGCTCGACCT
GTGGCAATCTCAGAGATTAGAGTCATTCCAAAAGGTTGTAAAGTTCACCC
AGAAATCAATGATCGGTTAGGGAAATTCAACTGGATTTGATTGGATTTGC
TCGACCTGTGGCAATCTCAGAGATTAGAGTCATTCCAAAAGGTTGTAAAG
TTCACCCAGAAATCAATGATCGGTTAGGtgaAACCAAACCATCGTCTTTC
AAATTGGAATTATTCATCAAGAATTTATCTCAACCAAGAGCAGCAGTATT
TGAAAAGTTGGGGATtgaAACCAAACCATCGTCTTTCAAATTGGAATTAT
TCATCAAGAATTTATCTCAACCAAGAGCAGCAGTATTTGAAAAGTTGGGG
ATACTTGATTATGAAGAAGGGAAAAGCATACAGctcatttcaaattcaaa
ggtgACTTGATTATGAAGAAGGGAAAAGCATACAGctcatttcaaattca
aaggtg
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000072_pilon | genome | sc0000072_pilon:582633..586422 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 253-303:3740 |
| Aaloc | 166-249:3024 |
| Aaloc | 58-162:1666 |
| Aaloc | 1-57:1 |
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