XLOC_043543 (mRNA) -

Overview
NameXLOC_043543
Unique NameXLOC_043543
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000015_pilon:599400..600348+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_043543 ID=XLOC_043543|Name=XLOC_043543|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=949bp|location=Sequence derived from alignment at sc0000015_pilon:599400..600348+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAATCAAAAGCgcatttttattacatttctGTGGTTAAATTGGTTGAA AAAAGGTAAAGCCATTCATGCTTCGCAGAAGTGCCAGGGTAATGAGGTAA CAAGTTCGATAAAAAAGTACAACTTTAAGACATAAGAAAGATAGACACCG TCGAAAATGATATACTGTTCCTGAATGAGTTATTATGGTGAGAAGGTCTA TGTTTTGGCAGATAGTCAAAATGTCTCCTcgcaatttaatttttttaaag aaattctaTTGAAAACATTAATGTACCTTCTTTCAGTTCACATGTTGGAG TGTTATGAATGTTTTGCTGACGTCGGCAGTTCTTGTGATCCTACAAAAAC AAGAGATTGTTCTGCTAATGAAATTTGCTTGACAATGTCATATAAAGAAT CTTATGAAGGGAAAGTCCTGAACAGTTTTGTCAAAGGTTGCGCCAGTGGA TGGGATAGCTGCGAATCAAATTGTGATGATGATTCAATATTCGACTGTAA GGTaggttaaaaattgtttttctaacCATAATAACTACATTATAGACTTA AAGCATGAGTTAAACACCATATAATATATTACCTGGACGTAAATTGGACA TATCTACCATATAATACTTCAGCATCTTGAGCATTTTGTCTGTTAACTGG AAGAGTCATTTATATGCCAAAAAACCAATCAGCTTTTTGTGTTTTATAct aaaatctacaaaatatagaaaaaatCAGAAAAAACATTAGAACAGCAACC TTTACATTTCTTCTCTTTCTGTTTTTAGGAATCATGCTGTAGAGGAAATT TATGTAACGAAGAAAGCGATGAAAACGCGCTCTGGTACGCGCTCTCATCG AAGAAAACTTATAATAGTGGAAATGCTGTGAAGAGTAACAAGTGCTTGAT GGCGGTTTTAGGTGTTATGCTATTTGTACTCAAAATTGGTTTCCTTTGA

Coding sequence (CDS) from alignment at sc0000015_pilon:599400..600348+

>XLOC_043543 ID=XLOC_043543|Name=XLOC_043543|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=882bp|location=Sequence derived from alignment at sc0000015_pilon:599400..600348+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAATCAAAAGCgcatttttattacatttctGTGGTTAAATTGGTTGAA
AAAAGATGAATCAAAAGCgcatttttattacatttctGTGGTTAAATTGG
TTGAAAAAAGTTCACATGTTGGAGTGTTATGAATGTTTTGCTGACGTCGG
CAGTTCTTGTGATCCTACAAAAACAAGAGATTGTTCTGCTAATGAAATTT
GCTTGACAATGTCATATAAAGAATCTTATGAAGGGAAAGTCCTGAACAGT
TTTGTCAAAGGTTGCGCCAGTGGATGGGATAGCTGCGAATCAAATTGTGA
TGATGATTCAATATTCGACTGTAAGTTCACATGTTGGAGTGTTATGAATG
TTTTGCTGACGTCGGCAGTTCTTGTGATCCTACAAAAACAAGAGATTGTT
CTGCTAATGAAATTTGCTTGACAATGTCATATAAAGAATCTTATGAAGGG
AAAGTCCTGAACAGTTTTGTCAAAGGTTGCGCCAGTGGATGGGATAGCTG
CGAATCAAATTGTGATGATGATTCAATATTCGACTGTAAGGAATCATGCT
GTAGAGGAAATTTATGTAACGAAGAAAGCGATGAAAACGCGCTCTGGTAC
GCGCTCTCATCGAAGAAAACTTATAATAGTGGAAATGCTGTGAAGAGTAA
CAAGTGCTTGATGGCGGTTTTAGGTGTTATGCTATTTGTACTCAAAATTG
GTTTCCTTTGAGAATCATGCTGTAGAGGAAATTTATGTAACGAAGAAAGC
GATGAAAACGCGCTCTGGTACGCGCTCTCATCGAAGAAAACTTATAATAG
TGGAAATGCTGTGAAGAGTAACAAGTGCTTGATGGCGGTTTTAGGTGTTA
TGCTATTTGTACTCAAAATTGGTTTCCTTTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_043543XLOC_043543-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000015_pilongenomesc0000015_pilon:599400..600348 +
Properties
Property NameValue
Aaloc271-441:779
Aaloc58-270:289
Aaloc1-54:1