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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000571_pilon:44474..47149- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_043539 ID=XLOC_043539|Name=XLOC_043539|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2676bp|location=Sequence derived from alignment at sc0000571_pilon:44474..47149- (Clytia hemisphaerica_ch_hm2_pilon)
AATACACAGTCGCGTACTGACGAGGACCAAGAAAGAGGGTTTCGTTGCCA
GGTTCTCCTTGGCAAATTAGACAACCAACTGCGAGAGAGAATACACATAA
AACTGAACACACGAGATCCAGCAAAAGTATTTCAATTCTTTCTATCACAT
AAAGCTACAATCGATAAACTGAGGAAAAAAAATGTCATCAAAGATGAGCA
ATACAAATTACTCCTTCCAACTTCTGGAATGGTCTACCTTGACCAGTTTG
ACAGTACACTCCTCTTTTTTGTAACTAGAGAGTTCTTCGGAGAAAATATG
AAAGATTTGATAAAAATCAGGAATAGGATCCAACATGGTGGTACCAAAGT
CAGTCTACCGGAATTCAATGCCATACTAAGTGATGCAGAACAACCCTTAT
TACAGCTAGGGCTATCCAAGGCTGAATTTGATGACATATGTAATATATGG
ATTGCTGGTTCTAAAGTGAAGAAACTGATGACCAAGACTTCTTTCAATTA
TGCCTGTCTACCGCCAGTTGCCAACCACTTCAGAAGAGCAAACCTGATCA
GCAATATTCACCAAGCAGTTTACCGTCAACACCACGATGACTTCAAATTC
TCTGTTGTCATCAGTGGGATTGGGGGCAGTGGAAAGTCAGAAACTGCTCG
CGAGTATTGGCAATCCTATCGTAATGTTTATTACGAGGATATCGTTTGTT
GGATTAACTGCAACAGCTTTGTCAACATCGAAAAATCATTCACCGAGATC
GCCAACCGATGTGGCATTGATCAGATCTATAATCAAAATGGGTCAGCCAA
ACCATTGAAAGAGATTTCAAATCTTGTTTACGATTACTTCTCAGTAAGAC
AGGATGTGAATAAACCCCGTAAAGTATTGTTTGTTCTAGACAATGTCATC
AATCAGGCTGCTTTGGTCGATTTGATTCCTGACAAAAAAAAGGAAGCACC
ATATTTTCTCATCACCTCACAATGCAGTGAATGGGATCAACGATTCGATG
TTATCAAGATAGGACAATTTTCTAGCGAAGAGGCTGAACAGTTCTTACAG
AGAAATATCCACGATGTAGAAGCACGCAAAGATAAAGAAGCAAACCAAAA
ACTTCTAAAAACTCTCAGCTATCTACCCCTTGCTCTACAGCAGGCTTTTT
CATTTATTAATAAGAATGGACTAACTGTTGAAATGTACCTAGCCATATTC
GATAAAAGACAAAAAGAACTTCTTTCAGAGGGAACCCAAGAAATCGGAAA
CCCTTCAGTTTATACTACTTTGTCTTTGACCTATAATAGATTATTACAGG
AAGGTGGTCAAAAAGTTATTGATCTTCTAAACAAAATCTCCTACTTGGAT
GGAAAAGTCATCAGGAAAGGATTACTGATCAAATTTGTTGATGATGTATT
TGTTCTAAATAAGATATTATCTTTATTGGCCAAGTACTCAATCATTGAAA
CCACAAACACAGGTACATGCTTTCTAGAAAACCAAATAAATTGTCACGAA
CTAACTCAAACCTTTCTCAAAACTTACGTTCCAAATGTCAAAGAACCAGT
CTATCAAGAGCTAGCAAATACCTTTATTGAAGACATGAGAAATTGCAGAA
GTCAAGAAAAAAAAATGGATGGCAAATACTGGTACCAGCATTTTCTTTTC
ATCTGTGAAAAAGATGTTGAAAATATCTTTCTTATGAAATTGATTGATGT
ACAGAATGATTTGATTCATCTTTTTGAAACACAAGGGCATATGAGAAGAC
TTTCCAACTACTTGAAAAAAATGATGGAAAAACTTTCACATACAGATGGT
TATGAGAGAAAAGACTTGTATTTTAAAACTAAATATAATTATGCAAACAC
TTTAAATAACCTTTCTCATTACCATGACGCAATACGTATATTTAAAGAAA
TCGAAACCGTTGAAAAGGACACTCTCGGTGAACGTCACAACAGTTACCTC
ATCACGAAGCATGCCATTGGACACTGTTTCATGAATTTATCTCACTACCA
TGAAGCATTACGTATATTTAAAGAAATCGAAACCGTTGAAAAGGACACTC
TCGGTGAACGTCACAACAGTTACCTCACCACAAAGCATGATATCGGACAA
TGTTTAATGAATTTATCTCATTACCATGACGCATTACGTATATTTAAAGA
AATCGAAACCGTTCAAAAGGACACTCTCGGTGAACGTCACAACGATTACC
TCACCACAAAGCATGATATCGGACAATGTTTAATGAATTTATCTCATTAC
CATGACGCATTACGTATATTTAAAGAAATCGAAACCGTTCAAAAGGACAC
TCTCGGTGAACGTCACAACAGTTACCTCATCACGAAGCATGCCATTGGAC
AATGTTTAAAGAATTTATCTCATTACCATGACGCATTACGTATATTTAAA
GAAATCGAAACCGTTCAAAAGGACACTCTCGGTGAACGTCACAACAGTTA
CCTCTCCACGAAGCATGCCATTGGACAATGTTTAAAGAATTTATCTCATT
ACCATGACGCATTACGTATATTTAAAGAAATCGAAACCGTTCAAAAGGAC
ACTCTCGGTGAACGTCACAACAGTTACCTCATCACGAAGCATGCCATTGG
ACAATGTTTAAAGAATTTATCTCATTACCATGAAGCATTACGTATATTTA
AAGAAATCGAAACCGTTCAAAAGGAC Coding sequence (CDS) from alignment at sc0000571_pilon:44474..47149- >XLOC_043539 ID=XLOC_043539|Name=XLOC_043539|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=4596bp|location=Sequence derived from alignment at sc0000571_pilon:44474..47149- (Clytia hemisphaerica_ch_hm2_pilon)
AATACACAGTCGCGTACTGACGAGGACCAAGAAAGAGGGTTTCGTTGCCA
GGTTCTCCTTGGCAAATTAGACAACCAACTGCGAGAGAGAATACACATAA
AACTGAACACACGAGATCCAGCAAAAGTATTTCAATTCTTTCTATCACAT
AAAGCTACAATCGATAAACTGAGGAAAAAAAATGTCATCAAAGATGAGCA
ATACAAATTACTCCTTCCAACTTCTGGAATGGTCTACCTTGACCAGTTTG
ACAGTACACTCCTCTTTTTTGTAACTAGAGAGTTCTTCGGAGAAAATATG
AAAGATTTGATAAAAATCAGGAATAGGATCCAACATGGTGGTACCAAAGT
CAGTCTACCGGAATTCAATGCCATACTAAGTGATGCAGAACAACCCTTAT
TACAGCTAGGGCTATCCAAGGCTGAATTTGATGACATATGTAATATATGG
ATTGCTGGTTCTAAAGTGAAGAAACTGATGACCAAGACTTCTTTCAATTA
TGCCTGTCTACCGCCAGTTGCCAACCACTTCAGAAGAGCAAACCTGATCA
GCAATATTCACCAAGCAGTTTACCGTCAACACCACGATGACTTCAAATTC
TCTGTTGTCATCAGTGGGATTGGGGGCAGTGGAAAGTCAGAAACTGCTCG
CGAGTATTGGCAATCCTATCGTAATGTTTATTACGAGGATATCGTTTGTT
GGATTAACTGCAACAGCTTTGTCAACATCGAAAAATCATTCACCGAGATC
GCCAACCGATGTGGCATTGATCAGATCTATAATCAAAATGGGTCAGCCAA
ACCATTGAAAGAGATTTCAAATCTTGTTTACGATTACTTCTCAGTAAGAC
AGGATGTGAATAAACCCCGTAAAGTATTGTTTGTTCTAGACAATGTCATC
AATCAGGCTGCTTTGGTCGATTTGATTCCTGACAAAAAAAAGGAAGCACC
ATATTTTCTCATCACCTCACAATGCAGTGAATGGGATCAACGATTCGATG
TTATCAAGATAGGACAATTTTCTAGCGAAGAGGCTGAACAGTTCTTACAG
AGAAATATCCACGATGTAGAAGCACGCAAAGATAAAGAAGCAAACCAAAA
ACTTCTAAAAACTCTCAGCTATCTACCCCTTGCTCTACAGCAGGCTTTTT
CATTTATTAATAAGAATGGACTAACTGTTGAAATGTACCTAGCCATATTC
GATAAAAGACAAAAAGAACTTCTTTCAGAGGGAACCCAAGAAATCGGAAA
CCCTTCAGTTTATACTACTTTGTCTTTGACCTATAATAGATTATTACAGG
AAGGTGGTCAAAAAGTTATTGATCTTCTAAACAAAATCTCCTACTTGGAT
GGAAAAGTCATCAGGAAAGGATTACTGATCAAATTTGTTGATGATGTATT
TGTTCTAAATAAGATATTATCTTTATTGGCCAAGTACTCAATCATTGAAA
CCACAAACACAGGTACATGCTTTCTAGAAAACCAAATAAATTGTCACGAA
CTAACTCAAACCTTTCTCAAAACTTACGTTCCAAATGTCAAAGAACCAGT
CTATCAAGAGCTAGCAAATACCTTTATTGAAGACATGAGAAATTGCAGAA
GTCAAGAAAAAAAAATGGATGGCAAATACTGGTACCAGCATTTTCTTTTC
ATCTGTGAAAAAGATGTTGAAAATATCTTTCTTATGAAATTGATTGATGT
ACAGAATGATTTGATTCATCTTTTTGAAACACAAGGGCATATGAGAAGAC
TTTCCAACTACTTGAAAAAAATGATGGAAAAACTTTCACATACAGATGGT
TATGAGAGAAAAGACTTGTATTTTAAAACTAAATATAATTATGCAAACAC
TTTAAATAACCTTTCTCATTACCATGACGCAATACGTATATTTAAAGAAA
TCGAAACCGTTGAAAAGGACACTCTCGGTGAACGTCACAACAGAATACAC
AGTCGCGTACTGACGAGGACCAAGAAAGAGGGTTTCGTTGCCAGGTTCTC
CTTGGCAAATTAGACAACCAACTGCGAGAGAGAATACACATAAAACTGAA
CACACGAGATCCAGCAAAAGTATTTCAATTCTTTCTATCACATAAAGCTA
CAATCGATAAACTGAGGAAAAAAAATGTCATCAAAGATGAGCAATACAAA
TTACTCCTTCCAACTTCTGGAATGGTCTACCTTGACCAGTTTGACAGTAC
ACTCCTCTTTTTTGTAACTAGAGAGTTCTTCGGAGAAAATATGAAAGATT
TGATAAAAATCAGGAATAGGATCCAACATGGTGGTACCAAAGTCAGTCTA
CCGGAATTCAATGCCATACTAAGTGATGCAGAACAACCCTTATTACAGCT
AGGGCTATCCAAGGCTGAATTTGATGACATATGTAATATATGGATTGCTG
GTTCTAAAGTGAAGAAACTGATGACCAAGACTTCTTTCAATTATGCCTGT
CTACCGCCAGTTGCCAACCACTTCAGAAGAGCAAACCTGATCAGCAATAT
TCACCAAGCAGTTTACCGTCAACACCACGATGACTTCAAATTCTCTGTTG
TCATCAGTGGGATTGGGGGCAGTGGAAAGTCAGAAACTGCTCGCGAGTAT
TGGCAATCCTATCGTAATGTTTATTACGAGGATATCGTTTGTTGGATTAA
CTGCAACAGCTTTGTCAACATCGAAAAATCATTCACCGAGATCGCCAACC
GATGTGGCATTGATCAGATCTATAATCAAAATGGGTCAGCCAAACCATTG
AAAGAGATTTCAAATCTTGTTTACGATTACTTCTCAGTAAGACAGGATGT
GAATAAACCCCGTAAAGTATTGTTTGTTCTAGACAATGTCATCAATCAGG
CTGCTTTGGTCGATTTGATTCCTGACAAAAAAAAGGAAGCACCATATTTT
CTCATCACCTCACAATGCAGTGAATGGGATCAACGATTCGATGTTATCAA
GATAGGACAATTTTCTAGCGAAGAGGCTGAACAGTTCTTACAGAGAAATA
TCCACGATGTAGAAGCACGCAAAGATAAAGAAGCAAACCAAAAACTTCTA
AAAACTCTCAGCTATCTACCCCTTGCTCTACAGCAGGCTTTTTCATTTAT
TAATAAGAATGGACTAACTGTTGAAATGTACCTAGCCATATTCGATAAAA
GACAAAAAGAACTTCTTTCAGAGGGAACCCAAGAAATCGGAAACCCTTCA
GTTTATACTACTTTGTCTTTGACCTATAATAGATTATTACAGGAAGGTGG
TCAAAAAGTTATTGATCTTCTAAACAAAATCTCCTACTTGGATGGAAAAG
TCATCAGGAAAGGATTACTGATCAAATTTGTTGATGATGTATTTGTTCTA
AATAAGATATTATCTTTATTGGCCAAGTACTCAATCATTGAAACCACAAA
CACAGGTACATGCTTTCTAGAAAACCAAATAAATTGTCACGAACTAACTC
AAACCTTTCTCAAAACTTACGTTCCAAATGTCAAAGAACCAGTCTATCAA
GAGCTAGCAAATACCTTTATTGAAGACATGAGAAATTGCAGAAGTCAAGA
AAAAAAAATGGATGGCAAATACTGGTACCAGCATTTTCTTTTCATCTGTG
AAAAAGATGTTGAAAATATCTTTCTTATGAAATTGATTGATGTACAGAAT
GATTTGATTCATCTTTTTGAAACACAAGGGCATATGAGAAGACTTTCCAA
CTACTTGAAAAAAATGATGGAAAAACTTTCACATACAGATGGTTATGAGA
GAAAAGACTTGTATTTTAAAACTAAATATAATTATGCAAACACTTTAAAT
AACCTTTCTCATTACCATGACGCAATACGTATATTTAAAGAAATCGAAAC
CGTTGAAAAGGACACTCTCGGTGAACGTCACAACAGTTACCTCATCACGA
AGCATGCCATTGGACAATGTTTAAAGAATTTATCTCATTACCATGACGCA
TTACGTATATTTAAAGAAATCGAAACCGTTCAAAAGGACACTCTCGGTGA
ACGTCACAACAGTTACCTCTCCACGAAGCATGCCATTGGACAATGTTTAA
AGAATTTATCTCATTACCATGACGCATTACGTATATTTAAAGAAATCGAA
ACCGTTCAAAAGGACACTCTCGGTGAACGTCACAACAGTTACCTCATCAC
GAAGCATGCCATTGGACAATGTTTAAAGAATTTATCTCATTACCATGAAG
CATTACGTATATTTAAAGAAATCGAAACCGTTCAAAAGGACTTACCTCAT
CACGAAGCATGCCATTGGACAATGTTTAAAGAATTTATCTCATTACCATG
ACGCATTACGTATATTTAAAGAAATCGAAACCGTTCAAAAGGACACTCTC
GGTGAACGTCACAACAGTTACCTCTCCACGAAGCATGCCATTGGACAATG
TTTAAAGAATTTATCTCATTACCATGACGCATTACGTATATTTAAAGAAA
TCGAAACCGTTCAAAAGGACACTCTCGGTGAACGTCACAACAGTTACCTC
ATCACGAAGCATGCCATTGGACAATGTTTAAAGAATTTATCTCATTACCA
TGAAGCATTACGTATATTTAAAGAAATCGAAACCGTTCAAAAGGAC
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| sc0000571_pilon | genome | sc0000571_pilon:44474..47149 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1945-2298:355 |
| Aaloc | 1-1941:2677 |
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