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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000311_pilon:218574..223878+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_043454 ID=XLOC_043454|Name=XLOC_043454|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5305bp|location=Sequence derived from alignment at sc0000311_pilon:218574..223878+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGCAGGATAATTACTTCGGACACCATAATATGCAAACCAAACTACCGGA
CACCATGGGACAGAATTACGGAAATTTGTATTCATTGAACAGTAAGTTaa
tcattttcaatttattactctttactttttattaccccatctttttattt
attgcctttCAATAATTGTGGCATTAACATAATGTAAACGAATAAATAAA
TTCGAACATCAATAAATTTGTTTCGCTTAACAATTTTCACCGGATAAAGC
AATCGATATAAATCCTGAACCAATTGACTCCTTTATTTTTTCACGGACAT
CATTTTTATCGAGGGAAATAAAAacactttgcaaaaagttttatttttcc
agtGATGAAATAATAACGACAGGGTCTGACTGTTGCATGGAGGACTAAAA
AGACTTCACATTGTTTGGTTTTATCAGAAAATAAGGTAGACCGCTATCAC
CTCTGGGGCATCAAAGCATTTTGCAAAGGAAGACTTGGCAGATGTTAGAA
ACGCTATTCTGAAGAACCATGATTGTCGATTTCTCTTGTCATTGCACAGA
ATGCCAGTCATACTGTAGTGTATTTTGAAAATAGGCGTCTACTGAAGttt
tcatcgattcaaagatttttataaattttatcggattttcaaagttttca
gcatttttcGAAGTTCTCGATAATAAACAAAGTCGAAACATAACATAACA
AATcatatttttcaagattttaattttttttttcaagatttcaaagcttt
ttccataaaattcGTCATTTTCAATGCTCTTTGACATGAACCGAAGTTGT
TTAGCGGATATTTTgcgtgtttttttatattaaaagGATACGGAAGGACG
TGGTCATTATCAACAATTTAGACGTCCAAACCGCAAAAATGTTGTCACAG
GTCACTTTTGTTATGCCAAAAGCAATTTTGTTTTTGGCAACTTTTCAGTG
ACACACGCACACACATGTTTTATCAATATCGATGcagatgaaataaaaat
atatttctccAGAGAAAATCagccattgttttttttttcaaaaaattcaa
aaaatgaattgttcaaaaagctaaaaGGATATTTAGATACCTTATcggtc
ctttttacgccggcccttatttcgccacagcctaattttgggcttacgcc
aataagggccgtaaataacgtcaaaatttgtaaacatcgctattcaggct
tcaaaacagtaagtattaactaaaatttacattaaaatgtcatctttcag
tattaaactgttgaaaattccattaaAAATCATTGGTTGTCGTGAAGTTT
TGGACATAGAGTGAAAGTTTTTGGAGTTATATAAGTTACATAGAGTTTCA
TCCtttaatcatgcctaaaattctttaaattgagaaaaaatggtcaagtg
aaaattacaaaattttggccctttttatgcCTGCCCTTATTACGCcgcga
gcccaaaaataacgccaataagggccggggtaaaaagggccgataaggta
gtttgaaatatttttccataGATTTCTTCCATGATTTTAGAAATTTGGAA
ATGTCACTtctgtcattttattttttgaaaacgaaaggattttgagattt
ttgctcAGGACCATGGAATAATTTACAATCAAAATATCTCTAACTATCTG
ATTATTCCTTTAAGCATTGTTGTAAAGATAATTCACTGTGACAAGGAAGA
AGTGAGGTTTATTTTAACCaatgaaatttttcgaaaacgaAAATTATCAA
GAACAGCGCAAATTTTCTTATCTAATTTAAAGCGTTTAAAAGATCAGAAT
CGTCTAGAAAGTGGAAATTagggagaaaataaaaaatatctaaaaataaa
atatttactcacttaaaaaactttttctaaaactaaaactaatttgaaat
tgaaatttaactTCTTGGGAAGGAATGAagattttctcgatttttttttg
ctggaaaaCCTTTAATCCTCGGTTAGACACGTATTGGCAATCCAAGCGGT
AAGATGAAAGAAACTTTACAAACTCGAAAGATTGTTATTGTGCTAATTGG
CATGGCAGAGAATTTGGTATTTAATTGAAGTGCAGAGAAGCACCACGTAA
CAATTCTTGATTGATCAATCAACTTCTCAACATGATGATGTTTTTCCACT
TTCTTTATGCAACTAGACAAAACTACTTAAAGATCTTTCAACAGATAAAG
CGACAGTACCAGAATTGAAAACAGTTTCGAAAATGCAGTGCAACTTGTAG
AAGATGTAAAATGTGAAAATAGAAAACCGACAACGAATGGCTGCATGTAA
CTAAAtgaataaacataaaaaattatttgaaatattctGAAAATTATCAT
ATCATGATATTATATTGATACAATCTTCAAATCATTATCCCTAATACTGG
GTGGTGTCCCGGGGAGGGGGCAGTCGATTAGTAAACGACCGTAGACCGTA
AGTTACTCCAAGGTCCCGAATAAACCTCCCAATCCGGTTATCAATTTCCA
ATAATTTTCGCATCCCCACGTTCTTATAATAAGGACCCCTTCCCGtatat
tcatttttgaaaatattttcaggacaCCCTCAAATAATTTCGGACCCCCC
TATTCGGGATCTTATTATTCAAAAAGGTGATATAATTTTGAGACAGATTA
TAAGCTGATCTTAttctgaaaaagtttttatttaactaagtcatttttat
taaaaaattccaagaaaactgaaattcCTTCCACGGTTAATTAGGCTAAT
AAGCCTACATTAGTGGTGAATAAAGAATTtcgaaattaacaaaattgaat
tatttgaaAGATTCCTCCCCTCCTCTTTGTAATAAGGCAAATTTCACGTG
ATGGTTAAAATACCACTAATGTAAGGGAAACATGCCAGTTttgattaaaa
tatttcatagcgAAACTGtcttcaaatgaaaaactttaataaagCTCAGT
ACCAACTAAAAGATTAAAAGGTGTGATTGGCCAAAATTATATTGCAAAAA
TATATTATTAGCGTAGGACTTCggcgaaaatttctttgaactGTTAGTGA
TGTTTAACAAAATGCCTAAATTTAATTGCTTTTGTAAATCAAGTTACTGG
TGAAGTATGCTCAATTATACTTCAATCAGTGCGTGTACACATCATGCCAA
TAAATCTTTATCAGGCCAATCGCACCTAATTGAACACATTTTCTATAATT
TGGCACTCCAAGGCAAAAACTTTCAGCATTTTGAATCTAAAGCAGCAATC
TGAAATGGCATGAATTTGGTTTAGCTTAACAGTGACCTGTATAATGAGGT
ATCAATTACAGCTATTAGCATGTCTAGCCGATGTCTACAAGATTTGAGGG
CGGTATAGAGTGACCGGAATTGTGAATTAGTTGCAAATCTAATAAAAAAT
GGGAAACGTTTTAATGCTTGTGTGGTGGTATAGACTGTTGGGTTGAGAGA
AAGGAAGCGAgagttaaaaacaaaacaaccacGATGTTGGTTGCAGGAAA
CTCCAACATATTAACATTTTACCATAGATTATAGCTTTTTGTAAAGTGTC
ATTGATCATTGTGCTATTGTCCGTATGCTCCAGTGGAAGATAAACTTTCA
GTGGGAGGTTGTAGCAAACTAACCTGCCTATCCAGGGGCTATTGTTTGGT
TTTTCGGAGACGACCGATGCCTGTAGGACTAGAGGGACAATCCTCAAACC
CTCCTTTTGACTGATAAATTGTAATGCAATAAAAAGATCCCTATAAAGAC
ACTTTATTCCTTCACAGAAACAACAAGCGCCACAGTCAAAACACCAATCC
GACCAATTACCAAACTTCCCACCACCTGCACCACAAATACGCACCCAAAG
AAATCCAGAACTGTTTTCACCAAGAAGCAAATCAATGAATTGGAAGGTGT
ATTTTACCAGAAGCGATATCTGACCATTAAAGATCGTGAAGAATTATCGA
GAAGATTGACGCTGACGGAAAATCAGGTATCAAAAATTTCCAATGACAGA
CAGTGTGCTGTGAAAGAAGTACACTTGTTTTGACAGCAgattttttaatc
tttgaaATGGGTACTGTTTTTAGTAAATCCtattccaaatttcaaaatag
caTAGAGGATTGTAGCCTGATTCCATtttggtaccgttggaaagcttttt
atactctttctaaagGCATGCGGTTTATACCCCTTCAAACAACGTGGTCA
AGAGCTATGGCAAAAATCTTTGAGCTGGTTTTCTGACCTATTTTTGACTC
AGACACacgacttttgggggactgagGGTTAAAATACACAGTTCTAACAG
TTCAGTGTCCAATGATTAATACTAAGAAACTTGATTCCTTTTTCCATGTT
ACAGGTGAAAGTCTGGTTCCAAAACCGACGTAACAAATGGAAACGAGAAA
TGAGTTTCAAAGTGGAATTTGCCAAATTCAACATGGTGCCCAACCCCTTG
AACATGGGTAGAGGTGTAGATGGTACTTTACCGAACAATCTTATGTTGCC
CACAACAACTACGTCACCGACAGAAACATCGGATTTTCAAATGACATCAC
ATCGTTATGAGGGATATGCATACCGTAATGCATTCCAAGACAGTTATTAT
AATCCATATCCAAACGTGTTCAACAACCAGGACACACAAAACCAACATAA
TTATTCACCACTTTCAAACAGCAGTAGTAATAACGAAGTCTCCTATCAAG
ACAACAACACTTCTATGCCTCAAACTTCGGTTGCTTTGGAAACATACGAC
AACAACTCCATTGTTTACCCACCCCCACCACCACCGCCGCCAGCACAACC
ACCACAACAATCGGTAGCGCAAAACATGACGGACTACCAAAATCAGCAAC
ATCATGCTATTTATTCACACTACAACAACTGCGACACTCAATATGACACA
ACAAAATACCAAGGAATGGATCAACAAATCCCCTCCTCGTACGACATTCA
CAACTATTCACCAACCGGTCAAACAAGCTCATACACATCACACAGATACA
CTGATGAAGCAACGCAACCACAAACCGACCCCATCACATCTCAAATATCC
CCTTTAGTAGCCAAATACACAGATGAACAACAACAAGCTTCACCTTACGA
AGCGTGCAAGTACACAGAACACAACCAACAAACTACTTCATACACGCCCA
GACTCACGCCCATGGTTCCCACAACATCAGGGCGTGAAATGTACACTGAT
AATACAGGTGTTGTTTACACTACATTAACTGATTACAGAAACAGTAGTGA
AAACCAAACCTTAAACTTGCCCAATCCACAATTTACATTCGGCAGTCACT
ATTGA Coding sequence (CDS) from alignment at sc0000311_pilon:218574..223878+ >XLOC_043454 ID=XLOC_043454|Name=XLOC_043454|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2502bp|location=Sequence derived from alignment at sc0000311_pilon:218574..223878+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGCAGGATAATTACTTCGGACACCATAATATGCAAACCAAACTACCGGA
CACCATGGGACAGAATTACGGAAATTTGTATTCATTGAACAATGCAGGAT
AATTACTTCGGACACCATAATATGCAAACCAAACTACCGGACACCATGGG
ACAGAATTACGGAAATTTGTATTCATTGAACAAAACAACAAGCGCCACAG
TCAAAACACCAATCCGACCAATTACCAAACTTCCCACCACCTGCACCACA
AATACGCACCCAAAGAAATCCAGAACTGTTTTCACCAAGAAGCAAATCAA
TGAATTGGAAGGTGTATTTTACCAGAAGCGATATCTGACCATTAAAGATC
GTGAAGAATTATCGAGAAGATTGACGCTGACGGAAAATCAGAAACAACAA
GCGCCACAGTCAAAACACCAATCCGACCAATTACCAAACTTCCCACCACC
TGCACCACAAATACGCACCCAAAGAAATCCAGAACTGTTTTCACCAAGAA
GCAAATCAATGAATTGGAAGGTGTATTTTACCAGAAGCGATATCTGACCA
TTAAAGATCGTGAAGAATTATCGAGAAGATTGACGCTGACGGAAAATCAG
GTGAAAGTCTGGTTCCAAAACCGACGTAACAAATGGAAACGAGAAATGAG
TTTCAAAGTGGAATTTGCCAAATTCAACATGGTGCCCAACCCCTTGAACA
TGGGTAGAGGTGTAGATGGTACTTTACCGAACAATCTTATGTTGCCCACA
ACAACTACGTCACCGACAGAAACATCGGATTTTCAAATGACATCACATCG
TTATGAGGGATATGCATACCGTAATGCATTCCAAGACAGTTATTATAATC
CATATCCAAACGTGTTCAACAACCAGGACACACAAAACCAACATAATTAT
TCACCACTTTCAAACAGCAGTAGTAATAACGAAGTCTCCTATCAAGACAA
CAACACTTCTATGCCTCAAACTTCGGTTGCTTTGGAAACATACGACAACA
ACTCCATTGTTTACCCACCCCCACCACCACCGCCGCCAGCACAACCACCA
CAACAATCGGTAGCGCAAAACATGACGGACTACCAAAATCAGCAACATCA
TGCTATTTATTCACACTACAACAACTGCGACACTCAATATGACACAACAA
AATACCAAGGAATGGATCAACAAATCCCCTCCTCGTACGACATTCACAAC
TATTCACCAACCGGTCAAACAAGCTCATACACATCACACAGATACACTGA
TGAAGCAACGCAACCACAAACCGACCCCATCACATCTCAAATATCCCCTT
TAGTAGCCAAATACACAGATGAACAACAACAAGCTTCACCTTACGAAGCG
TGCAAGTACACAGAACACAACCAACAAACTACTTCATACACGCCCAGACT
CACGCCCATGGTTCCCACAACATCAGGGCGTGAAATGTACACTGATAATA
CAGGTGTTGTTTACACTACATTAACTGATTACAGAAACAGTAGTGAAAAC
CAAACCTTAAACTTGCCCAATCCACAATTTACATTCGGCAGTCACTATTG
AGTGAAAGTCTGGTTCCAAAACCGACGTAACAAATGGAAACGAGAAATGA
GTTTCAAAGTGGAATTTGCCAAATTCAACATGGTGCCCAACCCCTTGAAC
ATGGGTAGAGGTGTAGATGGTACTTTACCGAACAATCTTATGTTGCCCAC
AACAACTACGTCACCGACAGAAACATCGGATTTTCAAATGACATCACATC
GTTATGAGGGATATGCATACCGTAATGCATTCCAAGACAGTTATTATAAT
CCATATCCAAACGTGTTCAACAACCAGGACACACAAAACCAACATAATTA
TTCACCACTTTCAAACAGCAGTAGTAATAACGAAGTCTCCTATCAAGACA
ACAACACTTCTATGCCTCAAACTTCGGTTGCTTTGGAAACATACGACAAC
AACTCCATTGTTTACCCACCCCCACCACCACCGCCGCCAGCACAACCACC
ACAACAATCGGTAGCGCAAAACATGACGGACTACCAAAATCAGCAACATC
ATGCTATTTATTCACACTACAACAACTGCGACACTCAATATGACACAACA
AAATACCAAGGAATGGATCAACAAATCCCCTCCTCGTACGACATTCACAA
CTATTCACCAACCGGTCAAACAAGCTCATACACATCACACAGATACACTG
ATGAAGCAACGCAACCACAAACCGACCCCATCACATCTCAAATATCCCCT
TTAGTAGCCAAATACACAGATGAACAACAACAAGCTTCACCTTACGAAGC
GTGCAAGTACACAGAACACAACCAACAAACTACTTCATACACGCCCAGAC
TCACGCCCATGGTTCCCACAACATCAGGGCGTGAAATGTACACTGATAAT
ACAGGTGTTGTTTACACTACATTAACTGATTACAGAAACAGTAGTGAAAA
CCAAACCTTAAACTTGCCCAATCCACAATTTACATTCGGCAGTCACTATT
GA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000311_pilon | genome | sc0000311_pilon:218574..223878 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 301-1251:4355 |
| Aaloc | 94-300:3770 |
| Aaloc | 1-90:1 |
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