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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000166_pilon:265052..267562- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_043452 ID=XLOC_043452|Name=XLOC_043452|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2511bp|location=Sequence derived from alignment at sc0000166_pilon:265052..267562- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGAAGTAGACAGCCACCAAGATGATCATCAATTATTGGATTGGGAAGC
CAAACTTTTCCTGGAAATCATGGAAGATGATGGACTGCTTGTGTTAGCTA
AAGGACTTGGCCTTGACCGTATGTTTTTGAAAGTTGTTCAAACATTTTGT
AAACAAGACAATTTGGTTTTTGTACTCAATACCATTCCAGAAGAACAGTT
CCATTTCCTTAATGAACTCAGTGCACTTGATGTTAAACATTTACCTAAAG
TAATTTCAGATAGTTCAGTTGAAGAACGTCGACAACTTTACCTCCAAGGA
GGTGTTTTCTTTGTTTCATCAAAAATATTGGTCATGGATATGCTTACTAA
GAGAGTTCCAATTGATTACATTACTGGTATTTTAGTAACACGTGCACACA
AGATAGCAGAATCAAGTCAGGAGAGTTTCATTTTGCGGATGTTTCGTGAG
CACAACAGTGATGGGTTTATCAAAGCTTTCAGTGACATACCAACTGCTTT
CATGGCTGGGTATTGTCAAGTGGAACGTGTGATGAAATTGCTTTTCATAA
GACATCTCTTTTTAAGACCACGTTTTCACAATGAGATTGCTGCTTGCCTT
GAATTACATAAACCTGATGTTATTGAGGTGAACATTGAAATCACACCAAA
AATGAGAGCTATTCAATTGTCTTTGTTAGACTTGCTGAACATCTCCTTGC
GTGAATTGAAGAGAGCTGTACCAAACTTAGATCCTGATCACTTCACTTTG
GAGAACTCCTTAAATAGAACTTTTGATCGCATGTTAAAAGTTCAATTAGA
TTCAGTCTGGAATGAGTTGGCAAACAGAACAAAAGAACTCGTTTCTGACA
TTCGGGTTCTTAGAACTTTACTCTCCTACCTTACTCAGTATGATTGTGTG
ACATTTTATAACTTTCTTGACACTTTAAAGAAAAATGAGAAAAATAAAAA
GAGTATGTGGATGTTAACTGATGCCGCTAACACTGTTTATGTCAATGCAA
AAGAGCGAGTGATGGGAGTCCCTGAGAAAGATAAGAAAGGAAAAGTTGTT
AAAAAGGGCAAACCAGAGCCTTGTCCAAAGTGGGAAATCCTCACAGAGAT
CTTGGATGAAATTGAGAAGGAAAAGGTTAATCAGGATGAGAAAAAGGTAT
TGGTTTGTGCGGTTGATGACCGAACTTCTTATCAGCTGAGTCAAGTTCTA
TGCCATGGTATTGATAGTTTCTTACAAGGGCAATATGAAAGGAGTGCGCT
TTCAACCGGCTATCATAGTGGCTCTGCTGAAGAGACTGATAGCGACTTTT
CAATGAACTTTAGCAAATTTTCTGACAATGAAAAAGCAGGTGACAAAGGC
AAATCAGATGAGGAAGATAACGATAGCAAATTTTCACTTGATTTGAATAC
CAATCCTCTCATCATTCATTCGTTACATGGCAGTGCAGACCATTACAGTT
TGTTCCAAACACTCTATGAATTTGAACCAACTTATGTTGTTTTGTTTGAT
GCATCTGTTGAATTTGTTCGTCAACTTGAGGTATTCAAAGCGTCTCGACC
AGGAATACCTCTTCGAGTATATTTTCTCTTCTACAGTAGTTCCATTGAAG
AACAACGCTATTTGACATCCTTGCGCCAAGAAAAAGATGCATTCGAGCTT
TTAATTCGTCAAAAAGCTGACATGGTTATTCCAGAGGAACGACAAGCCAA
AACACAAGCAGCTAAGAGTAGTCTTCGAGATGCGTCCAAAGCTTCTGCTA
CCGTTGTAAGCTCTCGTAAAGCAGGTGGACGAGATGTTCAAAATGCAAAA
ACCCGCAACATTGTGGTTGATATGCGTGAATTCGGAAGTGAGCTACCCAA
CATGTTGTATTGTCGTGGTATCGAGTTGTTGCCAGTAACTCTGGAGGTTG
GTGACTATATCTTGACTCCTGATATTTGTGTTGAGCGTAAAAGTGTCTCT
GATTTGATTGGTTCATTGAACAATGGACGATTGTACACACAGTGTGTTTC
AATGACGCGATTTTATCGGAAACCTGTTTTATTAATTGAATTCAACGAGT
CGAAATCGTTTTCATTGCAAGCAAAAGGATCATTGAAAAACGAAATCAGT
TTGCAAAATATCTCATCCAAATTAACCTTATTGACAATTCATTTCCCAAA
ACTCCGTATTATCTGGTCACAAAGCCCACAGCTGACTGCTGAGATCTTCG
AGGATTTGAAATCGAATGCTGATGAACCAAATGCAGAAGTTGCGATGGCT
GTTGGAGTCGAGGGTGCCGGTCAACAAAACCATTTCTACAATATCATTCA
ACAAGATCTGGTGGATCGCTTACCTGGCGTCAACATGAAGAACTGCCGTC
ACATTTTGAACAAATTCAATACCATGAAAGAATTAATGAACACTGATGAG
AAAACTATCAGTGATGTTCTTGGTAATGCAAACAATGCCAAACTGTTGAG
TAATTTCATTCATAAAAAGCATGACGTCACTCAACCTAAAATGAAACGTA
GGAAAAAGTAG Coding sequence (CDS) from alignment at sc0000166_pilon:265052..267562- >XLOC_043452 ID=XLOC_043452|Name=XLOC_043452|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=5022bp|location=Sequence derived from alignment at sc0000166_pilon:265052..267562- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGAAGTAGACAGCCACCAAGATGATCATCAATTATTGGATTGGGAAGC
CAAACTTTTCCTGGAAATCATGGAAGATGATGGACTGCTTGTGTTAGCTA
AAGGACTTGGCCTTGACCGTATGTTTTTGAAAGTTGTTCAAACATTTTGT
AAACAAGACAATTTGGTTTTTGTACTCAATACCATTCCAGAAGAACAGTT
CCATTTCCTTAATGAACTCAGTGCACTTGATGTTAAACATTTACCTAAAG
TAATTTCAGATAGTTCAGTTGAAGAACGTCGACAACTTTACCTCCAAGGA
GGTGTTTTCTTTGTTTCATCAAAAATATTGGTCATGGATATGCTTACTAA
GAGAGTTCCAATTGATTACATTACTGGTATTTTAGTAACACGTGCACACA
AGATAGCAGAATCAAGTCAGGAGAGTTTCATTTTGCGGATGTTTCGTGAG
CACAACAGTGATGGGTTTATCAAAGCTTTCAGTGACATACCAACTGCTTT
CATGGCTGGGTATTGTCAAGTGGAACGTGTGATGAAATTGCTTTTCATAA
GACATCTCTTTTTAAGACCACGTTTTCACAATGAGATTGCTGCTTGCCTT
GAATTACATAAACCTGATGTTATTGAGGTGAACATTGAAATCACACCAAA
AATGAGAGCTATTCAATTGTCTTTGTTAGACTTGCTGAACATCTCCTTGC
GTGAATTGAAGAGAGCTGTACCAAACTTAGATCCTGATCACTTCACTTTG
GAGAACTCCTTAAATAGAACTTTTGATCGCATGTTAAAAGTTCAATTAGA
TTCAGTCTGGAATGAGTTGGCAAACAGAACAAAAGAACTCGTTTCTGACA
TTCGGGTTCTTAGAACTTTACTCTCCTACCTTACTCAGTATGATTGTGTG
ACATTTTATAACTTTCTTGACACTTTAAAGAAAAATGAGAAAAATAAAAA
GAGTATGTGGATGTTAACTGATGCCGCTAACACTGTTTATGTCAATGCAA
AAGAGCGAGTGATGGGAGTCCCTGAGAAAGATAAGAAAGGAAAAGTTGTT
AAAAAGGGCAAACCAGAGCCTTGTCCAAAGTGGGAAATCCTCACAGAGAT
CTTGGATGAAATTGAGAAGGAAAAGGTTAATCAGGATGAGAAAAAGGTAT
TGGTTTGTGCGGTTGATGACCGAACTTCTTATCAGCTGAGTCAAGTTCTA
TGCCATGGTATTGATAGTTTCTTACAAGGGCAATATGAAAGGAGTGCGCT
TTCAACCGGCTATCATAGTGGCTCTGCTGAAGAGACTGATAGCGACTTTT
CAATGAACTTTAGCAAATTTTCTGACAATGAAAAAGCAGGTGACAAAGGC
AAATCAGATGAGGAAGATAACGATAGCAAATTTTCACTTGATTTGAATAC
CAATCCTCTCATCATTCATTCGTTACATGGCAGTGCAGACCATTACAGTT
TGTTCCAAACACTCTATGAATTTGAACCAACTTATGTTGTTTTGTTTGAT
GCATCTGTTGAATTTGTTCGTCAACTTGAGGTATTCAAAGCGTCTCGACC
AGGAATACCTCTTCGAGTATATTTTCTCTTCTACAGTAGTTCCATTGAAG
AACAACGCTATTTGACATCCTTGCGCCAAGAAAAAGATGCATTCGAGCTT
TTAATTCGTCAAAAAGCTGACATGGTTATTCCAGAGGAACGACAAGCCAA
AACACAAGCAGCTAAGAGTAGTCTTCGAGATGCGTCCAAAGCTTCTGCTA
CCGTTGTAAGCTCTCGTAAAGCAGGTGGACGAGATGTTCAAAATGCAAAA
ACCCGCAACATTGTGGTTGATATGCGTGAATTCGGAAGTGAGCTACCCAA
CATGTTGTATTGTCGTGGTATCGAGTTGTTGCCAGTAACTCTGGAGGTTG
GTGACTATATCTTGACTCCTGATATTTGTGTTGAGCGTAAAAGTGTCTCT
GATTTGATTGGTTCATTGAACAATGGACGATTGTACACACAGTGTGTTTC
AATGACGCGATTTTATCGGAAACCTGTTTTATTAATTGAATTCAACGAGT
CGAAATCGTTTTCATTGCAAGCAAAAGGATCATTGAAAAACGAAATCAGT
TTGCAAAATATCTCATCCAAATTAACCTTATTGACAATTCATTTCCCAAA
ACTCCGTATTATCTGGTCACAAAGCCCACAGCTGACTGCTGAGATCTTCG
AGGATTTGAAATCGAATGCTGATGAACCAAATGCAGAAGTTGCGATGGCT
GTTGGAGTCGAGGGTGCCGGTCAACAAAACCATTTCTACAATATCATTCA
ACAAGATCTGGTGGATCGCTTACCTGGCGTCAACATGAAGAACTGCCGTC
ACATTTTGAACAAATTCAATACCATGAAAGAATTAATGAACACTGATGAG
AAAACTATCAGTGATGTTCTTGGTAATGCAAACAATGCCAAACTGTTGAG
TAATTTCATTCATAAAAAGCATGACGTCACTCAACCTAAAATGAAACGTA
GGAAAAAGTAGATGGAAGTAGACAGCCACCAAGATGATCATCAATTATTG
GATTGGGAAGCCAAACTTTTCCTGGAAATCATGGAAGATGATGGACTGCT
TGTGTTAGCTAAAGGACTTGGCCTTGACCGTATGTTTTTGAAAGTTGTTC
AAACATTTTGTAAACAAGACAATTTGGTTTTTGTACTCAATACCATTCCA
GAAGAACAGTTCCATTTCCTTAATGAACTCAGTGCACTTGATGTTAAACA
TTTACCTAAAGTAATTTCAGATAGTTCAGTTGAAGAACGTCGACAACTTT
ACCTCCAAGGAGGTGTTTTCTTTGTTTCATCAAAAATATTGGTCATGGAT
ATGCTTACTAAGAGAGTTCCAATTGATTACATTACTGGTATTTTAGTAAC
ACGTGCACACAAGATAGCAGAATCAAGTCAGGAGAGTTTCATTTTGCGGA
TGTTTCGTGAGCACAACAGTGATGGGTTTATCAAAGCTTTCAGTGACATA
CCAACTGCTTTCATGGCTGGGTATTGTCAAGTGGAACGTGTGATGAAATT
GCTTTTCATAAGACATCTCTTTTTAAGACCACGTTTTCACAATGAGATTG
CTGCTTGCCTTGAATTACATAAACCTGATGTTATTGAGGTGAACATTGAA
ATCACACCAAAAATGAGAGCTATTCAATTGTCTTTGTTAGACTTGCTGAA
CATCTCCTTGCGTGAATTGAAGAGAGCTGTACCAAACTTAGATCCTGATC
ACTTCACTTTGGAGAACTCCTTAAATAGAACTTTTGATCGCATGTTAAAA
GTTCAATTAGATTCAGTCTGGAATGAGTTGGCAAACAGAACAAAAGAACT
CGTTTCTGACATTCGGGTTCTTAGAACTTTACTCTCCTACCTTACTCAGT
ATGATTGTGTGACATTTTATAACTTTCTTGACACTTTAAAGAAAAATGAG
AAAAATAAAAAGAGTATGTGGATGTTAACTGATGCCGCTAACACTGTTTA
TGTCAATGCAAAAGAGCGAGTGATGGGAGTCCCTGAGAAAGATAAGAAAG
GAAAAGTTGTTAAAAAGGGCAAACCAGAGCCTTGTCCAAAGTGGGAAATC
CTCACAGAGATCTTGGATGAAATTGAGAAGGAAAAGGTTAATCAGGATGA
GAAAAAGGTATTGGTTTGTGCGGTTGATGACCGAACTTCTTATCAGCTGA
GTCAAGTTCTATGCCATGGTATTGATAGTTTCTTACAAGGGCAATATGAA
AGGAGTGCGCTTTCAACCGGCTATCATAGTGGCTCTGCTGAAGAGACTGA
TAGCGACTTTTCAATGAACTTTAGCAAATTTTCTGACAATGAAAAAGCAG
GTGACAAAGGCAAATCAGATGAGGAAGATAACGATAGCAAATTTTCACTT
GATTTGAATACCAATCCTCTCATCATTCATTCGTTACATGGCAGTGCAGA
CCATTACAGTTTGTTCCAAACACTCTATGAATTTGAACCAACTTATGTTG
TTTTGTTTGATGCATCTGTTGAATTTGTTCGTCAACTTGAGGTATTCAAA
GCGTCTCGACCAGGAATACCTCTTCGAGTATATTTTCTCTTCTACAGTAG
TTCCATTGAAGAACAACGCTATTTGACATCCTTGCGCCAAGAAAAAGATG
CATTCGAGCTTTTAATTCGTCAAAAAGCTGACATGGTTATTCCAGAGGAA
CGACAAGCCAAAACACAAGCAGCTAAGAGTAGTCTTCGAGATGCGTCCAA
AGCTTCTGCTACCGTTGTAAGCTCTCGTAAAGCAGGTGGACGAGATGTTC
AAAATGCAAAAACCCGCAACATTGTGGTTGATATGCGTGAATTCGGAAGT
GAGCTACCCAACATGTTGTATTGTCGTGGTATCGAGTTGTTGCCAGTAAC
TCTGGAGGTTGGTGACTATATCTTGACTCCTGATATTTGTGTTGAGCGTA
AAAGTGTCTCTGATTTGATTGGTTCATTGAACAATGGACGATTGTACACA
CAGTGTGTTTCAATGACGCGATTTTATCGGAAACCTGTTTTATTAATTGA
ATTCAACGAGTCGAAATCGTTTTCATTGCAAGCAAAAGGATCATTGAAAA
ACGAAATCAGTTTGCAAAATATCTCATCCAAATTAACCTTATTGACAATT
CATTTCCCAAAACTCCGTATTATCTGGTCACAAAGCCCACAGCTGACTGC
TGAGATCTTCGAGGATTTGAAATCGAATGCTGATGAACCAAATGCAGAAG
TTGCGATGGCTGTTGGAGTCGAGGGTGCCGGTCAACAAAACCATTTCTAC
AATATCATTCAACAAGATCTGGTGGATCGCTTACCTGGCGTCAACATGAA
GAACTGCCGTCACATTTTGAACAAATTCAATACCATGAAAGAATTAATGA
ACACTGATGAGAAAACTATCAGTGATGTTCTTGGTAATGCAAACAATGCC
AAACTGTTGAGTAATTTCATTCATAAAAAGCATGACGTCACTCAACCTAA
AATGAAACGTAGGAAAAAGTAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000166_pilon | genome | sc0000166_pilon:265052..267562 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1-2511:2512 |
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