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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000046_pilon:1479291..1484227+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_043364 ID=XLOC_043364|Name=XLOC_043364|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4937bp|location=Sequence derived from alignment at sc0000046_pilon:1479291..1484227+ (Clytia hemisphaerica_ch_hm2_pilon)
GTAAAGATAAGGTTTGATGTCTGGTcggtaattttttcaaaattttagcg
AGTTTCTCGACATGTGTTATTTTGacgtattttgatatttttgccatCTT
TTGTTGGCTGTTTTGTTAATGGGATTGGCACCTTTGATGAGGAAATGACG
TTACATTTTTATCACCTTATAAATTAATATAATAACTATTAGATTAATTA
TCAACGCGAAAATTGATTACCGCGAAATAGTGGAATATCTGAGAAagtta
atataattttttacgCGTTAAAGAGAATACTGGAGATCTTTGTATATTTA
TTCCATTTCCGTTATTTATATCACTTCATTAGAATCTTGTCATATCCGGT
TATTGACTCCCAATAGGTTACAATTTTATGAAGAAGACAAAGGGAGTAAT
CAATTTCATTAAAAGAAAATATCGGCTTTTTTCGGAAGTTAATTATTACT
CTAGCAAGTCATGGAGTAAACACATCGTTGTTATATAAGTCGGCTCAATA
CATACGAGTCGAGACATTATACAGGTCCCTACAGTATGGGGTATGGAAAG
CTGTCAGTTTAGTTTGATAGTATTTGCTTATGTTGAATGCCTCGCTCACG
TGAAGGCAAAATTGCTTTTATGGTTGTTCACTTCAAAACTTAACTGGTTC
AACGGCTTGAAATCCAGCGAGGATAATGGGCTTTATGGAAACAGGGATGG
TGTTTATATAGGTTCACAAGGTCAACGCGTTAGATTTACAAAGTCAAAAT
TATTCTTATTGGAGAAAtagtttttcaaagtttatttcactgtaatatta
atttttgaaatacgTCACGCGTCACGTCATACGTCGCGTGCTTTATCAGA
ATCGAGATTTAcacccgggggggtactacccttgtcgaccgacgggggtg
ctccgcctaggttcgaaaaatggaccctacgtgggactcgaaatttgcga
aaaaagtgacccttaatgggactgaaattccaaaattttctcaaattttc
tacttttttcccaaactttccaaaaataggcaccctacgagggactgatt
tttctattttggtgtttttgcgaccctaccagggactcgcggaggttaaa
aaaggtaccctggccagcggagcatccccgtaaccgattttgccctagta
cctcCCCCGGGGATTTACATGGTACTTTTacgattttaaatttttttgaa
caatAAGTTGCTTAACCTTTAAGGATGCGACAGTTGCTAGATATATTATT
TAAGTATTCTTTTAACAAAGTGACTAAAACAAATATGTACTTTTCGCGTT
TATTAATCGCGCGAAAATTGATCGAAAGAAATTTGAATCACCCAGACAAA
ACATATGAGGGATGTCTGAAAGATAATTAAAAAGAgagtgaaaaatgatt
tgaaaacaaaattgaagtatTCATAGTAAATTGATAAGGTGAAATCAAGA
AAAGCTTGGGTAATtaattatcataattatctcaattatatttttgaaaa
gtctgcCTTATATTGTCACCTTCTCACTTGGGAAAAGTTGATTATTAAAT
TAGCTGGCGTACTGTGTTTTCACCACACGACTAAATGGACAGCTTTTGAT
GTGTACCGCATAAAATAATAATGAAGGAGAGGAGCATACGTGTGCTTTGT
TTCTCTTTACTTTGTCTGAACGGTCATGTCGAAACTGTCAGCTTTTCTCC
GGTCAGATTGATGTTAGAATAAATACAGATTTCTTCAAGTGTTCTTTGGA
GTGACACTTGAAATCATTCTACTGCGCTTTTCAAGTTTCTCACTatttta
atgttgattttttgaaatcaaagggttatattttaacccccttttttgtg
aaattttggcTTCTGAAGAAGGGACGATTCTGACAATATTTTACATTGTG
TTACGTCCttgtttgaatttctttatgACATATTTGGCATCTTGAATTCC
TTCACACATCTGTCAGTGGATAATACCTTTCTGGGAAAGAACTTGTCAAT
TTATGACTGTTTATagtaattttttcttgtttttgataGGAAAAAGATAT
CCAATAGAAATAATAAATCAACATATTTGAAATACCACATCAACTTGATA
GAACCGTCAAAATTATTTAGGATACGTTATTTGAAAACATACGAAGATAC
TGTACTTATTATAAACAAAATGACTGCAAGCTCATCCACACCACCTTCAA
CACCTCGGAAAGCTCATAAAGTTGTCTTGATTGGAGATTCACAATGTGGA
AAGTCATCATTATTAAGAAGATACAcaagaaaaagttttgaagaggTGAG
ATTTCAATATCTAATGTATAGAAACAGAGAGCATCttgtatatttcttaa
aaaaggGGTTTTGGAAAGTTTGGAAGTGATAGAGGAACGCttgaacattt
ttatttacacattataataaaaaactgtatataagaacataagactgtta
agaaaagttgagaaaagttgagaacattttaaagcttttttgactCAAGA
ACACCCGTTtatttaggaaaatgggtaaaaatggtcaaaaaatattctta
aaacatttttaggcttaaaacgtATAATCCCTGTATTTTTCATGACATTT
TGTGTAAATATCTCACTTATTCAAATGctgtttaaaaatgttttaagagC
TGACTAAATTGTTTCGTGTCTTTGAAAATCTTACCAATTACCAGATTTGT
AAGATTAGCAATCAAACAATAATCTTGAATTCGACTTTTGGACTTTGAAT
GTGAAGTTTCACAGGCTGGGTAAATAGGTTTTTAGAATCCACTCGCATTG
CCAATTTCTTTGTGTTtgttaatttcaaaatatctcaaCTTTCTAAACCC
CATTTTCAATGAATCGGAATGTTATTATTGCCACGACATGAAATCGTAAA
CTTTCTCATCAATCAAAGTACCTTTTCATTCATACAAAGATTTACGAGGT
CCCTGAAATAGCATGAGAATCAACTACCTGACCCACAAACGCCTCGCTAA
ACGGTTCATTAGTACAAACTTTCAGACATGCTAATGTGTTTATTTACGAG
TGATTAATATATCCTTATCTCGTTTGATTTCAGGATTATATGCCGACTGT
ATTTGATTCAGGATCCGCAGATATCGTCGCTGACCAGAATAATGATATCC
AAGTCAACATCTGGGATACATCAGGTAAAATGATGCTTTAATTTAACTTC
AATTTGCTATAAACATGCTCGATTGACGTTTTCGCTAAACAGACTTTTAA
TTTCTCAATCTCTGATTGCACTGTCGGTAAATCTAACTCATCATCAAGCC
taattatttaaagatttttggtttCCTGTTACTCCAATCATTTTTACACA
GTAATTAAGTTTGAGTATCTTCTATTCGTTTCTATGGAGCTTAAGGTCCG
TTAAAATATTGATTTCCATGTGATGTTATATTCTACTTTCCGTTGTTATA
CAGACTTCCTGATTATGATCCCTTCCTTTCACTTCAGACGGAAATTTATA
GTAACTGTAGCCCACTCAATGTCAATATTTTAGGTTACTATTATTTCTAT
TTCCATGACAATTTTAGGCTCTGGAGAATACGACCATGTCAGACCATTAT
CTTTTGGAGAAGCGACTGTCTTCATTGTCTGCTTTGACATCACCAAATCA
ACAACTTTAGAAAATATACAAAGAAAAGTAAGGAAGAAAACTAATTAGAA
TTTCAGATTATATACTTGCTTACTTTTAAATCTTAGTAGTTTTCAATCTA
TTAAAGCCTAGTTTTACTAAAATACATAGCCGTATTTGATATAAACTGGA
GAAGGGAAATTTTTGTCCTTCtgaacttttgttttgatgattttaaattt
gaatagttggtatcatattttcaatgttattataaaagaaagatcAATTC
AAAAACACTTAAAAGTGTAACAGCGGCCAACCCTTTGTTTCACGTAATTA
AGGCGTTCAAGTGCGGTCAACAATTTACGTTCTTTGATCAATTGCGGTCG
GAAAATCTTTATTCTATTGCCAAATCTGTTATTGTTTAATAGACATGACA
ATGAACTCcaagaacttttttttctttcgtgcGTATGATATTGTGTACTC
CTAATTTTTACGCAATTGGTCATCCCATATTTGTTATTTATCGTTGCGTC
AAATCAAGGTTTTCCTTCGGAAATGTTACATGTTTTGAACCCTTAGCAAA
CACccttaaaaactgtttttttaaccataatgtttttgtttttattctcc
AGTGGTTGCCAGAGATTCGCCAGCGTCACGCCGACAGACCCATTATCTTG
GTTGGATGCAAAAGTGATCTGAAAGCTGACCAGAAACTTACAAATATCCA
CAAACGATTAGTGCTGTCAAGCCAGGTAAATATTTACTAATATTTCTTTT
AACTTTTACACATTGATTCGTATATGTCCAACGGTAGTAGATTACAATCT
GGTATTTCAACATTGAATTCGCAGGCTAACAGCATTAATATTGATATCTG
AAAAGAGGTGGTTATACCGTCAATTATACTATACCTTGTCGGTCCTTTTT
ACACCGACCCATATTACGCCAAAGttcagtttttcaatttttatcccGGT
CCTAATTTAATTCTAATCCTTTACGCCAGCGACGAAAATCTAACGCCAAT
AAGAATCGGCGTAAAAAGGACATCATGTTGTTAATCCTAAATAAATTTTG
TGATTTAAGACAactcttttcttttacttaCAGGGTTTGTTACTGGCAAA
ACATATTGGAGCAATCGCATATTATGAATGTAGCAGTAAAGTAGAAGATA
CACCTGAAACGATAAACTCTTTATTTGAAACTGCAGCCATGGCGTCAACT
GGAAGTCTTGGTAAAATCTCAAAAGAACATCGaattaaatttgataaaaa
gaagaacaaagcATACGAGAAATGCACCATTTCTTGA Coding sequence (CDS) from alignment at sc0000046_pilon:1479291..1484227+ >XLOC_043364 ID=XLOC_043364|Name=XLOC_043364|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1614bp|location=Sequence derived from alignment at sc0000046_pilon:1479291..1484227+ (Clytia hemisphaerica_ch_hm2_pilon)
GTAAAGATAAGGTTTGATGTCTGGTAAAGATAAGGTTTGATGTCTGGAAA
AAGATATCCAATAGAAATAATAAATCAACATATTTGAAATACCACATCAA
CTTGATAGAACCGTCAAAATTATTTAGGATACGTTATTTGAAAACATACG
AAGATACTGTACTTATTATAAACAAAATGACTGCAAGCTCATCCACACCA
CCTTCAACACCTCGGAAAGCTCATAAAGTTGTCTTGATTGGAGATTCACA
ATGTGGAAAGTCATCATTATTAAGAAGATACAcaagaaaaagttttgaag
agGAAAAAGATATCCAATAGAAATAATAAATCAACATATTTGAAATACCA
CATCAACTTGATAGAACCGTCAAAATTATTTAGGATACGTTATTTGAAAA
CATACGAAGATACTGTACTTATTATAAACAAAATGACTGCAAGCTCATCC
ACACCACCTTCAACACCTCGGAAAGCTCATAAAGTTGTCTTGATTGGAGA
TTCACAATGTGGAAAGTCATCATTATTAAGAAGATACAcaagaaaaagtt
ttgaagagGATTATATGCCGACTGTATTTGATTCAGGATCCGCAGATATC
GTCGCTGACCAGAATAATGATATCCAAGTCAACATCTGGGATACATCAGG
ATTATATGCCGACTGTATTTGATTCAGGATCCGCAGATATCGTCGCTGAC
CAGAATAATGATATCCAAGTCAACATCTGGGATACATCAGGCTCTGGAGA
ATACGACCATGTCAGACCATTATCTTTTGGAGAAGCGACTGTCTTCATTG
TCTGCTTTGACATCACCAAATCAACAACTTTAGAAAATATACAAAGAAAA
GCTCTGGAGAATACGACCATGTCAGACCATTATCTTTTGGAGAAGCGACT
GTCTTCATTGTCTGCTTTGACATCACCAAATCAACAACTTTAGAAAATAT
ACAAAGAAAATGGTTGCCAGAGATTCGCCAGCGTCACGCCGACAGACCCA
TTATCTTGGTTGGATGCAAAAGTGATCTGAAAGCTGACCAGAAACTTACA
AATATCCACAAACGATTAGTGCTGTCAAGCCAGTGGTTGCCAGAGATTCG
CCAGCGTCACGCCGACAGACCCATTATCTTGGTTGGATGCAAAAGTGATC
TGAAAGCTGACCAGAAACTTACAAATATCCACAAACGATTAGTGCTGTCA
AGCCAGGGTTTGTTACTGGCAAAACATATTGGAGCAATCGCATATTATGA
ATGTAGCAGTAAAGTAGAAGATACACCTGAAACGATAAACTCTTTATTTG
AAACTGCAGCCATGGCGTCAACTGGAAGTCTTGGTAAAATCTCAAAAGAA
CATCGaattaaatttgataaaaagaagaacaaagcATACGAGAAATGCAC
CATTTCTTGAGGTTTGTTACTGGCAAAACATATTGGAGCAATCGCATATT
ATGAATGTAGCAGTAAAGTAGAAGATACACCTGAAACGATAAACTCTTTA
TTTGAAACTGCAGCCATGGCGTCAACTGGAAGTCTTGGTAAAATCTCAAA
AGAACATCGaattaaatttgataaaaagaagaacaaagcATACGAGAAAT
GCACCATTTCTTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000046_pilon | genome | sc0000046_pilon:1479291..1484227 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 604-807:4734 |
| Aaloc | 481-603:4253 |
| Aaloc | 373-480:3570 |
| Aaloc | 280-369:3084 |
| Aaloc | 25-279:2041 |
| Aaloc | 1-21:1 |
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