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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000043_pilon:810782..813453- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_043290 ID=XLOC_043290|Name=XLOC_043290|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2672bp|location=Sequence derived from alignment at sc0000043_pilon:810782..813453- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTTCAAAAACTCACTTAAAAGGTTGATAACGCAACAACCCAGGAAAGT
CATTGGTTTCTCAGGTTTGATTTTCATCTCTTCTTTATTGTGTAAAAATA
AACTTAATATGTTTAGTTGATGTAATTGGACATTCTACTCAATAGATACT
GCAATAATTATATGGAAGTTAACACATTTTAATATTTTGGGGGGATTTAA
CCAAAAACGGCCAAATCTACCACATGAAACTTGAACCAAATATCACTAGT
TTTATAATATTAATAGCCCATATTCCCAGGACTTCAAAAGGCTTCAACAA
ATTTGTATAAAGGGTCAAATCATGTGTCAATAAAGATTGAATGATATCTA
ACCTCTTTTTCCGCTCTATTCTACAGTCAGAAGTATGAGTGGCGATTATC
AATTTGAGACTTTGAATGTGGTTAAGCCAGCAGAAAATGTTTTGCACGTG
GAGATGAATCGACCCAACAAAAGGAACGCCATGAACCAACAATTTTTCAA
GTCAGTTTATTGAAATATTTTCTCTATATTGGGAATATTTAACGTTTATT
GTATTGCTTTCTCCATTAAACTCATTCATTAGATACATTGACATTATAAT
GCTAGAGCAAATGAACGTCCTGTCGAAGATTTAACCACTATTCAAATATG
TTTTAATAATTTGTTTACTTCAGAGATATGACAAAATGTTTCACTCATAT
TGCAGATGATCCACACGCAAGAGTTGTTGTGTTGTCAGGAAGCGGAAAGC
TCTTCACAGCTGGTAAGTGAGTTTCAAGAGCCCTGGTGGTGGAGATGCAA
ATCCAAATTTAACCGCCTCATATTGGTGAATTTTGCTTAGAAGCTAAGAA
AACTAAGCATAAAACTTTTTGATCACTCTTCTTTGCCAAAAAGAAAAAAA
AAACTGAGAAAAGGGCTTATATTATATTTTCTAATTCTAATGACCTTGTT
GTTTCTCTGAAGATAACTGCCACTAAACAGGGCGGCCCTTGTTCTTTCGG
CTATTTATGGTCCTTGGAATGATTTAGTAGCCAATAAAATGCTTTCTGCA
AAGATTCGATTGTTTTTCCTGTTTTTATGAGAAAAAGTTAATTCTTCGAC
AGTTTTTTTCTGATTCTTTTGTCCTTCACCTCAAACTCTTTTTAGTCAAA
TATCATCATTTATATAAAACTGTAGTTAAACTTGAAATAGACAGGTTTAG
AAAGGTTTAGATACAGTTGTGTCAAGATTAATTTTGATTTTTGTTTACAC
ATCTGATGGTTTTTCTGTTTCATTTATTCATTTGTTCATTTTATATAGGT
TTGGATGTGATGAGTTTTGCCAGTAGCTTGATGCCCACTCCTGATGGAGA
CGTCGGTCGAAAAGCCTTTAGCATGCGAAAGATGATTAAAGAGATTCAAG
ATTCGTTGACAGTGATCGAAAAATGTCCACAGCCCGTCATAGCGGCTGTC
CATTCAGCTTGTGTGGGTGGTGGTGTGGATATGATTTGTGCTTGTGATAT
TCGGATGTCCACTGATGATGCTTGGTTTCAAATCAAGGTTTTTATTATAA
TCTTTTTGTCATTGAATATCTCCCCCTCAAATTTTTTAAAGCGTAGACGT
AGCGTTAAACTGAATATCATCCTTTCTTTTAGGAAGTTGATCTTGCATTG
GCTGCAGATATCGGTACCTTACAGCGCATGCCAAAGCTCATGGGAAGCCA
CAGGTACCTGTTGTCTCATCTTTTTTTCAAATACTTGTCAAGCCCGAAAA
AAGTACACAATATGTTCTTAACTGTTAAAATTTTTGATTTTCTTTTTTTT
TCTTCAGTTTAATTCGTGAATTAGCGTACACAGCACGTCCAATGTATGCA
GATGAAGCGCAAAGGAACGGATTTGTCGGGTATACTCTTTGTATCATTAC
TATAATTCTTCTTTCAACCCTTGGAAAGAGCCTTGGTTTTCTTTTAATCT
TCGTTTGGCCTTCCTTTCTTTAAGACGTGTTTTCAAGGACAAGGAAGAGA
TGATGAAGAGTGCTTTTCGTCTGGCCAAACAAATTGCTTCCAAATCCCCT
ATCGCCGTCCAAACAACCAAATTACAGTTGAACTACGCCCGTGATCATGG
AGTCGATGAAGGTCTGGATTACATTGTAAGTATTCATTTCATCATTTTCA
TCACATTTTATGTCTCACGGTGCAATGCTAAATATTTGCCCGTTCAAATA
GCGAAAGATTTACATCGACGAGCCTCTATCAATGGAGTAAAGCGGATGGC
TAAAAGCGAATCCTGATTCCTTTCCCAGACAAAATTCGGCCGGATTTTAG
ATGACAGATTTGAATATAGCGCTTTCTTTATTTCCACGTTGTACGTTTTT
TTGAAATCTGGAAATAAATGTTACTTTCTATTTAGCGTTTGTGTTAAAAC
CGCACGGACCGCGCGAGCTAGATGGGAAATAAGTGGTTTTGAATTCTACG
CAAGATACGTACTCAGTTCTAGCCGTTCTCCAATATCATCCAACAGTAAC
CATGTTTAGTTTAGGATTTGACTGCCTGTATGTTTTAACTTTTTCCGTTT
CTTACAGGCATCGTGGAACATGGGGTTTGCTTCAGACACAAGATATGTTG
AAAGCGGCACAGGCTACCATGCAAAATGAGACAGCTTCGTTTGACGATAT
GCTTCCTCCATCAAAACTATGA Coding sequence (CDS) from alignment at sc0000043_pilon:810782..813453- >XLOC_043290 ID=XLOC_043290|Name=XLOC_043290|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1850bp|location=Sequence derived from alignment at sc0000043_pilon:810782..813453- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTTCAAAAACTCACTTAAAAGGTTGATAACGCAACAACCCAGGAAAGT
CATTGGTTTCTCAGATGTTCAAAAACTCACTTAAAAGGTTGATAACGCAA
CAACCCAGGAAAGTCATTGGTTTCTCAGTCAGAAGTATGAGTGGCGATTA
TCAATTTGAGACTTTGAATGTGGTTAAGCCAGCAGAAAATGTTTTGCACG
TGGAGATGAATCGACCCAACAAAAGGAACGCCATGAACCAACAATTTTTC
AATCAGAAGTATGAGTGGCGATTATCAATTTGAGACTTTGAATGTGGTTA
AGCCAGCAGAAAATGTTTTGCACGTGGAGATGAATCGACCCAACAAAAGG
AACGCCATGAACCAACAATTTTTCAAAGATATGACAAAATGTTTCACTCA
TATTGCAGATGATCCACACGCAAGAGTTGTTGTGTTGTCAGGAAGCGGAA
AGCTCTTCACAGCTGAGATATGACAAAATGTTTCACTCATATTGCAGATG
ATCCACACGCAAGAGTTGTTGTGTTGTCAGGAAGCGGAAAGCTCTTCACA
GCTGGTTTGGATGTGATGAGTTTTGCCAGTAGCTTGATGCCCACTCCTGA
TGGAGACGTCGGTCGAAAAGCCTTTAGCATGCGAAAGATGATTAAAGAGA
TTCAAGATTCGTTGACAGTGATCGAAAAATGTCCACAGCCCGTCATAGCG
GCTGTCCATTCAGCTTGTGTGGGTGGTGGTGTGGATATGATTTGTGCTTG
TGATATTCGGATGTCCACTGATGATGCTTGGTTTCAAATCAAGGTTTGGA
TGTGATGAGTTTTGCCAGTAGCTTGATGCCCACTCCTGATGGAGACGTCG
GTCGAAAAGCCTTTAGCATGCGAAAGATGATTAAAGAGATTCAAGATTCG
TTGACAGTGATCGAAAAATGTCCACAGCCCGTCATAGCGGCTGTCCATTC
AGCTTGTGTGGGTGGTGGTGTGGATATGATTTGTGCTTGTGATATTCGGA
TGTCCACTGATGATGCTTGGTTTCAAATCAAGGAAGTTGATCTTGCATTG
GCTGCAGATATCGGTACCTTACAGCGCATGCCAAAGCTCATGGGAAGCCA
CAGGAAGTTGATCTTGCATTGGCTGCAGATATCGGTACCTTACAGCGCAT
GCCAAAGCTCATGGGAAGCCACAGTTTAATTCGTGAATTAGCGTACACAG
CACGTCCAATGTATGCAGATGAAGCGCAAAGGAACGGATTTGTCGGTTTA
ATTCGTGAATTAGCGTACACAGCACGTCCAATGTATGCAGATGAAGCGCA
AAGGAACGGATTTGTCGGACGTGTTTTCAAGGACAAGGAAGAGATGATGA
AGAGTGCTTTTCGTCTGGCCAAACAAATTGCTTCCAAATCCCCTATCGCC
GTCCAAACAACCAAATTACAGTTGAACTACGCCCGTGATCATGGAGTCGA
TGAAGGTCTGGATTACATTACGTGTTTTCAAGGACAAGGAAGAGATGATG
AAGAGTGCTTTTCGTCTGGCCAAACAAATTGCTTCCAAATCCCCTATCGC
CGTCCAAACAACCAAATTACAGTTGAACTACGCCCGTGATCATGGAGTCG
ATGAAGGTCTGGATTACATTGCATCGTGGAACATGGGGTTTGCTTCAGAC
ACAAGATATGTTGAAAGCGGCACAGGCTACCATGCAAAATGAGACAGCTT
CGTTTGACGATATGCTTCCTCCATCAAAACTATGAGCATCGTGGAACATG
GGGTTTGCTTCAGACACAAGATATGTTGAAAGCGGCACAGGCTACCATGC
AAAATGAGACAGCTTCGTTTGACGATATGCTTCCTCCATCAAAACTATGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000043_pilon | genome | sc0000043_pilon:810782..813453 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 826-924:100 |
| Aaloc | 811-825:116 |
| Aaloc | 661-810:698 |
| Aaloc | 589-657:865 |
| Aaloc | 517-585:1041 |
| Aaloc | 280-516:1373 |
| Aaloc | 190-276:1999 |
| Aaloc | 67-186:2295 |
| Aaloc | 1-63:2673 |
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