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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000072_pilon:324820..328811- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_043206 ID=XLOC_043206|Name=XLOC_043206|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3992bp|location=Sequence derived from alignment at sc0000072_pilon:324820..328811- (Clytia hemisphaerica_ch_hm2_pilon)
GACCAGAAGGTCGCCGAAGCATTGGGATTGACAGAAAAAGAGGACCAGAT
AGATGACGCAGCAAATAAAATAGAGAAAATCAAAAAGGCAATAAGTCGAT
TTGTTGAAAGTTCGAATCCTATTGAAGTCGATACTGATAAGGACGCAAAG
ACTAATGGACAAAATACAGACCCGAATAAGGTGCAAAATACAGACCAGAA
TAAAGATAAAGAAAATAACAATAAAACAATTTTCATTGACGGGCGTGAAA
GCGCTAATGGTGATAAAGATAAAACTTTTAAGGAAGATTCGACAAAACAA
CACAAACAAAACAATGGAACTCTAGAAGAAAAAATTACTGAAAGTTTTAA
AACTGGAACGACTTCTGACAACAAGAAACCAAATGATAATAATGTCGATT
CTAGTATGATTTCCAATGCTGACGGAACGTTGCCTAAGAAAGCTTTCCAT
AATAATACTGACAGCATAAACGAAAGCAAGGAAAAACAGATTATGGGTAC
AGCAAAACTAGCTAATGATAGTAGAAATGTGAATACCGATGAAAAACAAA
CTGCTTCCCCGAAAGAAGTGACGAATGCTGAAATGCCTGCGATAAATCTG
GACGAATTATCGATCGATCGGGAGTTAGAGCAAGTACAAAAAGCGTCAGA
AATTTTATATAGTCAACTGTCTAAGATGAATCCTACTCCAGACAGTCCTG
AAGAGAAGGTAATTGTTGGTTGGTCATAATCTTGGACATTGAGTTTAAAT
TCCAAAGGGCTAGAATAGAATCTCTAACCTTTCCCAGGCAAGAAAAAGGG
AAGCCACTTATTTCTCATCCAGAACACGCCTAGAACGCGCCGCAACCATA
ATAAGTAGCTTCATTTCCCATCCAGGGGTCTCAAGTCTAGCCCTTTGGGC
TTGAAAGTCAATGGTCGTGGTCGTATTCTCTGCCCGGAAACCTGGTGACA
AAAAGCCATTTGCTGTATCCAATCTTTTTATTTTTATGATTGAAATGGCT
TCAGCAACGGGTTTGGTTCCCAAAGCAGTCGTATCTTGATTGGTTTAGAA
ATATCAACGAATCAATCATTTTACGCGTAATGACTTATTAGGGAATTCTC
TCTATCACGTCATCTGCCTCTTTTTTTTGAAGCCAGAAATTTTGTGTATA
AAAAGAAAGCAAAAAGTCTCTTTAGGTCAAATTTTTTACTGGTATCATTT
TCTTGATTTTCCCCATGAAGTCCCAATAAAGTTACTTTGGTAGAGTGGGT
TTCTTAAAAACTAATAGCCGACAGACTATTATGACACTTTATGATGGAGT
GCTAAAAGTTACACTTACACAGACGAATTTGATATAGGGCAATAAAAAAG
GCCTTTCGGAAAAATATTGCTGACTAAAATTGCTAATTATGTTATGGAGG
TTTTCTAAGGCATTGTTACCTAAGGGGACCAGAAAACTTGTTCGAGTTAG
CGGTTCGAGATTAAGAGACCCCACTGTAACTTGTTTCTCTTGTTTACAGG
CTTATGGATCTGTCACCAACAAAGCAACACTGAACGCTACTAACGAACAA
TTTGCATCACCGGTTCACATCGCAAACGCTCAAAACTTCACCGAAGGTGT
TAAGGAATCGAATGAACACAAGAGAGTGCAAAGGCAGGCTAAAAAGCGGA
CTATTGTAGCCTGGGTTCCAGCTCAAATGAAACATCATGGACATCAAATG
AAGAAAAATAGACGTAGTAACATTTTACAGACCACCAGACGAGAAACAAA
GACTTTGAATGGATTTTTAAGCAAGTTTTTGAAACACAAGAGGAACAAAA
TCAGACGTAAAAATGGAAAGAGGAGTTCTGTTCATCATCAAATAGCAAAG
AAACGAAAAAGAAGCAAAGTTAAGCATTTGAAGAATAAAAGACATCCAAA
AGTAGGTGACAATGAAGTAAAGAACGCTGTTGCCACACTAGAGTCGTTGT
TGCTAGAAAAACAAAGACTCACAAGCCATCGCAAGCCACTCAGTCATGTC
ATTGAAAGAAGAAATAAAATACGGACCAGATATGACGATCAGGATGTATT
TTCCAGACCAATTGACCCAACAACAAGTTGGTTTAAACGAGACTTAAAAG
CCACCAGTGATGACTATTATCCATCTCCACAGATCTACAAAGCACCTATC
CGTGACCAGAACGAAATTCGGAGCCAAATCTCACAGACCTCAAATAACAA
AGATGTAAAAGCTCAGACTAGATCAGCATTCAAAAGCCCTGAGGAACTTG
AAAAAGAGTTGATTGCTAAAGTGGAAAAAGCTAAGAGACTTTTGAAGGAG
AACTTTGTGGATAAGAAGAATAAGACACTGGATGAAGACACGAAAGTAGA
TTCAATACTGTATGATAAATATCAAAAACAAAATGTAGCATTGACTCGTA
AATTAGGTCATATTCTAAACGACTCCAAAGCTGTTGATAATGTGTTGAAT
AAACTAGATAACGAAGATGTTAAAAAGGAGGAAGAGTTGAACAAGAAATA
TAAAGTGATTACCACAACTGCTGACGATATCTATTCCAAAGATAAAGAGA
TTCTAGAAGAACAGCTTGATCGTGCCAATAATACAGCTATTGATGATTTA
AGAAGAGATAAGACAGACCTGGCGAATAATGGTGATGGAGGATACATTGA
TGATGGGGATCCTGTTGCAAGGGATTCAGCCCCGAGGAGTGGATTTGCGT
CCAGGAATACAACCCAAGATGAAGATCCACATTCAAAATTAGGATTCAAA
GCTAGATCTTATAAGAATTCTTCGAGTGTTGAGATGGTTGATTATGCACG
AAATTCAACCATATCAGTTCCGGATCACGCAAAAGCTGAATCTGAACTTC
ATAGTATGATCGATTTAACGACTTCGACTGATTTAAAGAATGCTGTATCT
CCTTATGAGAGATCTAATACGACCAGTATGGAACAAGCAGCTAATGAAAA
TGCTGAAGAACCAGAAACAGATGATTCTATATATCCAGAAGCGTCAGTAA
CAAAAACGTCCAAAATCATCGATGAGGATAATGGGAGTGGTCAGATTCCC
AAAGGATTTGCTTCGCCTGGAAATGATGATAAGATGGAATCAAATTCAGA
TGAGAAATCTTTGACGAATTCAAACCCAGAAGATTATTATTTAGCATATG
AAAAAGCAGAATATGGCAATGCTGCAGATAAAAATATCAAAGAAGATAAG
GATGTGAAAACTTTGGCAAAACCAGGCAAAGATGGAGATTCGGATGCGAA
GTTATCAGAATCGAAAACCAAGGGTGAGGAAGAGACTAAAGAGAAGAAAG
AAGAGAAGGATAAGGAAAATTCCAAGGTGGAGGATGCAGAAAAAGACAAA
TCAACGAACAAAGACTCGGGAAGCGATTCAAAGAAATCGTCGAAAGAAAA
CGAAAGCGAAAGTGTAAGCAACAAAGATGACAAGAAGGTCTCAGATGATA
AAGACGCAGAATTAAAGAAGCAAAAATTAAAAGAAGCAAATAGCAGAATC
ACACACGTTCAACTGGCTGGTCCAAACAGCATGGGATTCGGGTTAGCTCT
TAATAATAACACGTTCCAAAATGCTTTAACCAACAATACAAAGGAGAAAT
CGAATAAAGATGGGACGAAGGTGAAAGGAGACAAAGAAGGAAAGGAGGAG
ACTGGAGTCTTGAAATTGAAAGATGAGGAGAGTAAAACTAACGTGGAAAA
AGATGAAGAGAAGAAGCTACGAAAAGACGAAGAGGATGAAGAAATGAAAG
AGAAAAAGGTTTCCGAGGATAAGAAACTTGGTTCTGAAACCTTGAAGATG
AATAATGAGGAGAGAAAAACTGACGAGGAAAAAGATGAAGAAAAGAAGCT
ACCAAAAGATGAACAGGAAAAGGTTTCCGATGAAGAGATGAAGAAATCTC
GCAAAAACGAAGGGGAGGATAGCGAAGAGAAGAAGATGAAGAAAGAGGAA
GACAAAGAAAAGAATAACGATAAAGAGAATGTGAAAGTAGAG Coding sequence (CDS) from alignment at sc0000072_pilon:324820..328811- >XLOC_043206 ID=XLOC_043206|Name=XLOC_043206|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=6402bp|location=Sequence derived from alignment at sc0000072_pilon:324820..328811- (Clytia hemisphaerica_ch_hm2_pilon)
GACCAGAAGGTCGCCGAAGCATTGGGATTGACAGAAAAAGAGGACCAGAT
AGATGACGCAGCAAATAAAATAGAGAAAATCAAAAAGGCAATAAGTCGAT
TTGTTGAAAGTTCGAATCCTATTGAAGTCGATACTGATAAGGACGCAAAG
ACTAATGGACAAAATACAGACCCGAATAAGGTGCAAAATACAGACCAGAA
TAAAGATAAAGAAAATAACAATAAAACAATTTTCATTGACGGGCGTGAAA
GCGCTAATGGTGATAAAGATAAAACTTTTAAGGAAGATTCGACAAAACAA
CACAAACAAAACAATGGAACTCTAGAAGAAAAAATTACTGAAAGTTTTAA
AACTGGAACGACTTCTGACAACAAGAAACCAAATGATAATAATGTCGATT
CTAGTATGATTTCCAATGCTGACGGAACGTTGCCTAAGAAAGCTTTCCAT
AATAATACTGACAGCATAAACGAAAGCAAGGAAAAACAGATTATGGGTAC
AGCAAAACTAGCTAATGATAGTAGAAATGTGAATACCGATGAAAAACAAA
CTGCTTCCCCGAAAGAAGTGACGAATGCTGAAATGCCTGCGATAAATCTG
GACGAATTATCGATCGATCGGGAGTTAGAGCAAGTACAAAAAGCGTCAGA
AATTTTATATAGTCAACTGTCTAAGATGAATCCTACTCCAGACAGTCCTG
AAGAGAAGGACCAGAAGGTCGCCGAAGCATTGGGATTGACAGAAAAAGAG
GACCAGATAGATGACGCAGCAAATAAAATAGAGAAAATCAAAAAGGCAAT
AAGTCGATTTGTTGAAAGTTCGAATCCTATTGAAGTCGATACTGATAAGG
ACGCAAAGACTAATGGACAAAATACAGACCCGAATAAGGTGCAAAATACA
GACCAGAATAAAGATAAAGAAAATAACAATAAAACAATTTTCATTGACGG
GCGTGAAAGCGCTAATGGTGATAAAGATAAAACTTTTAAGGAAGATTCGA
CAAAACAACACAAACAAAACAATGGAACTCTAGAAGAAAAAATTACTGAA
AGTTTTAAAACTGGAACGACTTCTGACAACAAGAAACCAAATGATAATAA
TGTCGATTCTAGTATGATTTCCAATGCTGACGGAACGTTGCCTAAGAAAG
CTTTCCATAATAATACTGACAGCATAAACGAAAGCAAGGAAAAACAGATT
ATGGGTACAGCAAAACTAGCTAATGATAGTAGAAATGTGAATACCGATGA
AAAACAAACTGCTTCCCCGAAAGAAGTGACGAATGCTGAAATGCCTGCGA
TAAATCTGGACGAATTATCGATCGATCGGGAGTTAGAGCAAGTACAAAAA
GCGTCAGAAATTTTATATAGTCAACTGTCTAAGATGAATCCTACTCCAGA
CAGTCCTGAAGAGAAGGCTTATGGATCTGTCACCAACAAAGCAACACTGA
ACGCTACTAACGAACAATTTGCATCACCGGTTCACATCGCAAACGCTCAA
AACTTCACCGAAGGTGTTAAGGAATCGAATGAACACAAGAGAGTGCAAAG
GCAGGCTAAAAAGCGGACTATTGTAGCCTGGGTTCCAGCTCAAATGAAAC
ATCATGGACATCAAATGAAGAAAAATAGACGTAGTAACATTTTACAGACC
ACCAGACGAGAAACAAAGACTTTGAATGGATTTTTAAGCAAGTTTTTGAA
ACACAAGAGGAACAAAATCAGACGTAAAAATGGAAAGAGGAGTTCTGTTC
ATCATCAAATAGCAAAGAAACGAAAAAGAAGCAAAGTTAAGCATTTGAAG
AATAAAAGACATCCAAAAGTAGGTGACAATGAAGTAAAGAACGCTGTTGC
CACACTAGAGTCGTTGTTGCTAGAAAAACAAAGACTCACAAGCCATCGCA
AGCCACTCAGTCATGTCATTGAAAGAAGAAATAAAATACGGACCAGATAT
GACGATCAGGATGTATTTTCCAGACCAATTGACCCAACAACAAGTTGGTT
TAAACGAGACTTAAAAGCCACCAGTGATGACTATTATCCATCTCCACAGA
TCTACAAAGCACCTATCCGTGACCAGAACGAAATTCGGAGCCAAATCTCA
CAGACCTCAAATAACAAAGATGTAAAAGCTCAGACTAGATCAGCATTCAA
AAGCCCTGAGGAACTTGAAAAAGAGTTGATTGCTAAAGTGGAAAAAGCTA
AGAGACTTTTGAAGGAGAACTTTGTGGATAAGAAGAATAAGACACTGGAT
GAAGACACGAAAGTAGATTCAATACTGTATGATAAATATCAAAAACAAAA
TGTAGCATTGACTCGTAAATTAGGTCATATTCTAAACGACTCCAAAGCTG
TTGATAATGTGTTGAATAAACTAGATAACGAAGATGTTAAAAAGGAGGAA
GAGTTGAACAAGAAATATAAAGTGATTACCACAACTGCTGACGATATCTA
TTCCAAAGATAAAGAGATTCTAGAAGAACAGCTTGATCGTGCCAATAATA
CAGCTATTGATGATTTAAGAAGAGATAAGACAGACCTGGCGAATAATGGT
GATGGAGGATACATTGATGATGGGGATCCTGTTGCAAGGGATTCAGCCCC
GAGGAGTGGATTTGCGTCCAGGAATACAACCCAAGATGAAGATCCACATT
CAAAATTAGGATTCAAAGCTAGATCTTATAAGAATTCTTCGAGTGTTGAG
ATGGTTGATTATGCACGAAATTCAACCATATCAGTTCCGGATCACGCAAA
AGCTGAATCTGAACTTCATAGTATGATCGATTTAACGACTTCGACTGATT
TAAAGAATGCTGTATCTCCTTATGAGAGATCTAATACGACCAGTATGGAA
CAAGCAGCTAATGAAAATGCTGAAGAACCAGAAACAGATGATTCTATATA
TCCAGAAGCGTCAGTAACAAAAACGTCCAAAATCATCGATGAGGATAATG
GGAGTGGTCAGATTCCCAAAGGATTTGCTTCGCCTGGAAATGATGATAAG
ATGGAATCAAATTCAGATGAGAAATCTTTGACGAATTCAAACCCAGAAGA
TTATTATTTAGCATATGAAAAAGCAGAATATGGCAATGCTGCAGATAAAA
ATATCAAAGAAGATAAGGATGTGAAAACTTTGGCAAAACCAGGCAAAGAT
GGAGATTCGGATGCGAAGTTATCAGAATCGAAAACCAAGGGTGAGGAAGA
GACTAAAGAGAAGAAAGAAGAGAAGGATAAGGAAAATTCCAAGGTGGAGG
ATGCAGAAAAAGACAAATCAACGAACAAAGACTCGGGAAGCGATTCAAAG
AAATCGTCGAAAGAAAACGAAAGCGAAAGTGTAAGCAACAAAGATGACAA
GAAGGTCTCAGATGATAAAGACGCAGAATTAAAGAAGCAAAAATTAAAAG
AAGCAAATAGCAGAATCACACACGTTCAACTGGCTGGTCCAAACAGCATG
GGATTCGGGTTAGCTCTTAATAATAACACGTTCCAAAATGCTTTAACCAA
CAATACAAAGGAGAAATCGAATAAAGATGGGACGAAGGTGAAAGGAGACA
AAGAAGGAAAGGAGGAGACTGGAGTCTTGAAATTGAAAGATGAGGAGAGT
AAAACTAACGTGGAAAAAGATGAAGAGAAGAAGCTACGAAAAGACGAAGA
GGATGAAGAAATGAAAGAGAAAAAGGTTTCCGAGGATAAGAAACTTGGTT
CTGAAACCTTGAAGATGAATAATGAGGAGAGAAAAACTGACGAGGAAAAA
GATGAAGAAAAGAAGCTACCAAAAGATGAACAGGAAAAGGTTTCCGATGA
AGAGATGAAGAAATCTCGCAAAAACGAAGGGGAGGATAGCGAAGAGAAGA
AGATGAAGAAAGAGGAAGACAAAGAAAAGAATAACGATAAAGAGAATGTG
AAAGTAGAGGCTTATGGATCTGTCACCAACAAAGCAACACTGAACGCTAC
TAACGAACAATTTGCATCACCGGTTCACATCGCAAACGCTCAAAACTTCA
CCGAAGGTGTTAAGGAATCGAATGAACACAAGAGAGTGCAAAGGCAGGCT
AAAAAGCGGACTATTGTAGCCTGGGTTCCAGCTCAAATGAAACATCATGG
ACATCAAATGAAGAAAAATAGACGTAGTAACATTTTACAGACCACCAGAC
GAGAAACAAAGACTTTGAATGGATTTTTAAGCAAGTTTTTGAAACACAAG
AGGAACAAAATCAGACGTAAAAATGGAAAGAGGAGTTCTGTTCATCATCA
AATAGCAAAGAAACGAAAAAGAAGCAAAGTTAAGCATTTGAAGAATAAAA
GACATCCAAAAGTAGGTGACAATGAAGTAAAGAACGCTGTTGCCACACTA
GAGTCGTTGTTGCTAGAAAAACAAAGACTCACAAGCCATCGCAAGCCACT
CAGTCATGTCATTGAAAGAAGAAATAAAATACGGACCAGATATGACGATC
AGGATGTATTTTCCAGACCAATTGACCCAACAACAAGTTGGTTTAAACGA
GACTTAAAAGCCACCAGTGATGACTATTATCCATCTCCACAGATCTACAA
AGCACCTATCCGTGACCAGAACGAAATTCGGAGCCAAATCTCACAGACCT
CAAATAACAAAGATGTAAAAGCTCAGACTAGATCAGCATTCAAAAGCCCT
GAGGAACTTGAAAAAGAGTTGATTGCTAAAGTGGAAAAAGCTAAGAGACT
TTTGAAGGAGAACTTTGTGGATAAGAAGAATAAGACACTGGATGAAGACA
CGAAAGTAGATTCAATACTGTATGATAAATATCAAAAACAAAATGTAGCA
TTGACTCGTAAATTAGGTCATATTCTAAACGACTCCAAAGCTGTTGATAA
TGTGTTGAATAAACTAGATAACGAAGATGTTAAAAAGGAGGAAGAGTTGA
ACAAGAAATATAAAGTGATTACCACAACTGCTGACGATATCTATTCCAAA
GATAAAGAGATTCTAGAAGAACAGCTTGATCGTGCCAATAATACAGCTAT
TGATGATTTAAGAAGAGATAAGACAGACCTGGCGAATAATGGTGATGGAG
GATACATTGATGATGGGGATCCTGTTGCAAGGGATTCAGCCCCGAGGAGT
GGATTTGCGTCCAGGAATACAACCCAAGATGAAGATCCACATTCAAAATT
AGGATTCAAAGCTAGATCTTATAAGAATTCTTCGAGTGTTGAGATGGTTG
ATTATGCACGAAATTCAACCATATCAGTTCCGGATCACGCAAAAGCTGAA
TCTGAACTTCATAGTATGATCGATTTAACGACTTCGACTGATTTAAAGAA
TGCTGTATCTCCTTATGAGAGATCTAATACGACCAGTATGGAACAAGCAG
CTAATGAAAATGCTGAAGAACCAGAAACAGATGATTCTATATATCCAGAA
GCGTCAGTAACAAAAACGTCCAAAATCATCGATGAGGATAATGGGAGTGG
TCAGATTCCCAAAGGATTTGCTTCGCCTGGAAATGATGATAAGATGGAAT
CAAATTCAGATGAGAAATCTTTGACGAATTCAAACCCAGAAGATTATTAT
TTAGCATATGAAAAAGCAGAATATGGCAATGCTGCAGATAAAAATATCAA
AGAAGATAAGGATGTGAAAACTTTGGCAAAACCAGGCAAAGATGGAGATT
CGGATGCGAAGTTATCAGAATCGAAAACCAAGGGTGAGGAAGAGACTAAA
GAGAAGAAAGAAGAGAAGGATAAGGAAAATTCCAAGGTGGAGGATGCAGA
AAAAGACAAATCAACGAACAAAGACTCGGGAAGCGATTCAAAGAAATCGT
CGAAAGAAAACGAAAGCGAAAGTGTAAGCAACAAAGATGACAAGAAGGTC
TCAGATGATAAAGACGCAGAATTAAAGAAGCAAAAATTAAAAGAAGCAAA
TAGCAGAATCACACACGTTCAACTGGCTGGTCCAAACAGCATGGGATTCG
GGTTAGCTCTTAATAATAACACGTTCCAAAATGCTTTAACCAACAATACA
AAGGAGAAATCGAATAAAGATGGGACGAAGGTGAAAGGAGACAAAGAAGG
AAAGGAGGAGACTGGAGTCTTGAAATTGAAAGATGAGGAGAGTAAAACTA
ACGTGGAAAAAGATGAAGAGAAGAAGCTACGAAAAGACGAAGAGGATGAA
GAAATGAAAGAGAAAAAGGTTTCCGAGGATAAGAAACTTGGTTCTGAAAC
CTTGAAGATGAATAATGAGGAGAGAAAAACTGACGAGGAAAAAGATGAAG
AAAAGAAGCTACCAAAAGATGAACAGGAAAAGGTTTCCGATGAAGAGATG
AAGAAATCTCGCAAAAACGAAGGGGAGGATAGCGAAGAGAAGAAGATGAA
GAAAGAGGAAGACAAAGAAAAGAATAACGATAAAGAGAATGTGAAAGTAG
AG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000072_pilon | genome | sc0000072_pilon:324820..328811 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 3076-3201:127 |
| Aaloc | 1864-3072:1336 |
| Aaloc | 709-1863:2494 |
| Aaloc | 1-708:3993 |
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