XLOC_043199 (mRNA) -

Overview
NameXLOC_043199
Unique NameXLOC_043199
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000493_pilon:64278..65582+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_043199 ID=XLOC_043199|Name=XLOC_043199|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1305bp|location=Sequence derived from alignment at sc0000493_pilon:64278..65582+ (Clytia hemisphaerica_ch_hm2_pilon)
aACATTGATATATGTGCACTGAGCGAAGTTAGACGAGAAGGACAAGGAAA CCTAGTCGAAAGGGATTATACAATATACTGGAGCGGAGGCACTAAGAAGG AAGCCGGTGTTGGATTGGCTATTTCtaacaaattatcttccttcGAAATG ACCACAGTACCGATAAGCGATAGATTGATGGTGTTAAGAATTCGACTCCA TTCTGGAAAATATCTTAAACTTGTCAGTGTATACGCCCCAACTATGCAAC GCACACAGGAAGAGAAAGAACTCTTTTACCAATCTCTCACGGATGTTTTA CGTTCTGACAGAGACGACCTTTATCTTATTCTCGGTGACTTCAACGCAAG AGTGGGATCAGATTGGCAACTTTGGCCAAACGTCCTCGGGAAGCATGGTA TCGGAAAAATGAACTCAAACGGACTTATGCTACTCGATTTTTGCACCCAA AACTCATTCACTGTTATGGGTTCTGTTTTCCAACTTTCGAATAAATTTAA AACCTCCTGGCAACATTTACGGTCAAAACATTGGCATCAGATTGATCACG TCCTCGCCGATCCTCAAACAAGACCTCACATCTCAATCACCAAAACGTAT CTTGATGCTGATTGCTACTCAGACCATAAACTTGTTATATGTAAATGTTT CTTCCGTTtgtttcgaaaaagaaaaggaacGAAAGCTCCATCCAGACCGA AATACAGCATTACGCCAGAAAGAATTTTGGAACTTCAACGTCGTCTAGAT AATGATCTTGCGAACTCTAAAATTAATTGGGAAAACTTAAAAACTTCTCT GCTATCTGCTACGTCAAACACCTTTCCCAAACAAAGAAAGCAAAACAGAG ATTggtttgatgaaaatgatcaacaGATTCTTACACTTCTTAAAGACAAA AATCGAACCAGACGTGAGATCCAACAAGAAgtgagaaagataaaaaatga ttgGTTCATCCAAAAAGCGTCAGAAGCTGAAAGATATCGTTTGGAAAACA ATCTGAAAGACTTTTACGCTACTCTTCGTGAGGTATACGGTCCTTCATCT CGCAACTCACACCCTATCAAATCGAAAGACGGGAAATTGCTAACAACCAA AGGTGTAATAAAGGAACGCTGGGTCGAACACTTTTCAGAACTTATCAACA ACGTCACAGAAACCGACGAAACAGTTCTTGATGAAATCGATCAACGTCCT ATCGATTACTCACTTGATGAACCGATCACCGAAAAAGAGCTTGACGATGC AATAAAACGGTCTAAACTCGGTAAAAGCCCAGGTCCCGATGGCATTATTC CTGAA

Coding sequence (CDS) from alignment at sc0000493_pilon:64278..65582+

>XLOC_043199 ID=XLOC_043199|Name=XLOC_043199|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1362bp|location=Sequence derived from alignment at sc0000493_pilon:64278..65582+ (Clytia hemisphaerica_ch_hm2_pilon)
aACATTGATATATGTGCACTGAGCGAAGTTAGACGAGAAGGACAAGGAAA
CCTAGTCGAAAGGGATTATACAATATACTGGAGCGGAGGCACTAAGAAGG
AAGCCGGTGTTGGAaACATTGATATATGTGCACTGAGCGAAGTTAGACGA
GAAGGACAAGGAAACCTAGTCGAAAGGGATTATACAATATACTGGAGCGG
AGGCACTAAGAAGGAAGCCGGTGTTGGACGTCGTCTAGATAATGATCTTG
CGAACTCTAAAATTAATTGGGAAAACTTAAAAACTTCTCTGCTATCTGCT
ACGTCAAACACCTTTCCCAAACAAAGAAAGCAAAACAGAGATTggtttga
tgaaaatgatcaacaGATTCTTACACTTCTTAAAGACAAAAATCGAACCA
GACGTGAGATCCAACAAGAAgtgagaaagataaaaaatgattgGTTCATC
CAAAAAGCGTCAGAAGCTGAAAGATATCGTTTGGAAAACAATCTGAAAGA
CTTTTACGCTACTCTTCGTGAGGTATACGGTCCTTCATCTCGCAACTCAC
ACCCTATCAAATCGAAAGACGGGAAATTGCTAACAACCAAAGGTGTAATA
AAGGAACGCTGGGTCGAACACTTTTCAGAACTTATCAACAACGTCACAGA
AACCGACGAAACAGTTCTTGATGAAATCGATCAACGTCCTATCGATTACT
CACTTGATGAACCGATCACCGAAAAAGAGCTTGACGATGCAATAAAACGG
TCTAAACTCGGTAAAAGCCCAGGTCCCGATGGCATTATTCCTGAACGTCG
TCTAGATAATGATCTTGCGAACTCTAAAATTAATTGGGAAAACTTAAAAA
CTTCTCTGCTATCTGCTACGTCAAACACCTTTCCCAAACAAAGAAAGCAA
AACAGAGATTggtttgatgaaaatgatcaacaGATTCTTACACTTCTTAA
AGACAAAAATCGAACCAGACGTGAGATCCAACAAGAAgtgagaaagataa
aaaatgattgGTTCATCCAAAAAGCGTCAGAAGCTGAAAGATATCGTTTG
GAAAACAATCTGAAAGACTTTTACGCTACTCTTCGTGAGGTATACGGTCC
TTCATCTCGCAACTCACACCCTATCAAATCGAAAGACGGGAAATTGCTAA
CAACCAAAGGTGTAATAAAGGAACGCTGGGTCGAACACTTTTCAGAACTT
ATCAACAACGTCACAGAAACCGACGAAACAGTTCTTGATGAAATCGATCA
ACGTCCTATCGATTACTCACTTGATGAACCGATCACCGAAAAAGAGCTTG
ACGATGCAATAAAACGGTCTAAACTCGGTAAAAGCCCAGGTCCCGATGGC
ATTATTCCTGAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_043199XLOC_043199-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000493_pilongenomesc0000493_pilon:64278..65582 +
Properties
Property NameValue
Aaloc115-681:739
Aaloc1-114:1