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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000136_pilon:782104..784343+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_042965 ID=XLOC_042965|Name=XLOC_042965|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2240bp|location=Sequence derived from alignment at sc0000136_pilon:782104..784343+ (Clytia hemisphaerica_ch_hm2_pilon)
GACATCAAAACACAGCTGATTAAAATCATTAAAGGTAGGCACTTTGTGCA
ATAAAATTAGCCTCAGGAACaactcttccagaaaaataaCTCTTTATGTG
CTTAGCCTTAGATGGATCCCCTGTTTTGACTTGTTGAATTTTGGTTTGAA
ATTCTCACTACTTGTGATAGGTGTGTTGACTCAGTATTTTACACAAAGTA
GCCAATCATTGGAGAACCTCTTGCCtggtttatttgaaattttaccagcA
AGCTTTATTTAGCAATgtttaaataattttagatagtggaaatttgaaag
ttattcaaaaaaagttttagccaatgttttaaaggttttgcgGTCTTATT
TTATTGAAGCAGAACCCAAAATCGTGGTTAGTCagatttattttattgtt
ttttttgttttcagggtATTATGATGACATCATTACGTTCATGCAAAACA
GAACAGAAGGCCTTTATGAGGACATTTGCGATGGAGAGGTTTACAAGAGT
CACGATGACCACAATCGCATTACGATGGTCTGGCATATTGATGGAGCTCc
tacaatcaaatcaaaatctttgaatgTTTGGCTTATCACTGCATTCGTTG
TCGAGTTACCTATACACAAGCGTTTTTGTGTgcgaaatattttattttgt
ggCATTTGGTATGGTGAACAAAAgccaaattttgatctgtttcaGCTTCA
ATTTGTTCGGGAGGTAAAACAACTGCGTGACATTGGTTTTGCTGTAAGCA
TACTTGATgaagacaaatttttttttcttgaaattcaaGCAAGTTTAGCA
GATTTACCTGCAAGAGCTGCATCATTGAGCTTAAAACAGTTTAATGGAAA
GTTCGGATGCCCGGTCTGTTATCATCCTGGATGCCCCAAAGAAGGAAATC
ATCTAGTTCGGTTTTATCGTTACCAAGAAAATCCATTCCCTTTGAGAACA
ATGGAAGAAAGCATGTCGTTTGCTGAACGCGCTGAGGAGATGGGAAATGC
ATTTTTTGGTTGGAAGGGAAAGTCTGTAGTGCTAGATATCACTGAAATAC
CGTATAAAGTCCCTTTTGATTATATGCACTTGATCCTAGAGGGGGAATTA
AAacgaaaactttcaaaatttcttttcccaCCGAACGGACTCCTCGATCA
AGATGGCTTGGATGAAATTAACGGTATCCTAAAACAAATTCACTACCCTC
ACGATTTCTCTAAGAAAATCACCTCTTTGAACATCAAGGTAGTAAAAAGG
GCAAAGGCCGGCGATCTCCAGCTTCTTCTTTTGCACGTTTTGTTACCGAC
TCTTAAAGATCGTATTCCAGACGACTCTTTCTGTCATTTGGGGTTACTCG
TTACCAGCCTTCAACTCCTAAACCAAGACAGCGCTCGTGAGGAGGACATC
AAGCTTGCCGAAAATATGTTGATTGAATATCACCGCAATGATCAAAGGCT
TCATGGAGACGAATCTCAAACATTTACCAATCATGCTCTAATCCACATCG
CTGACCAGAGGAGAAAACATGGCTGCCCGTTAGTCTTGATTTCAAACTTC
GTCTTCGAAGGCTTCATTGCAACCCTTTTAAGGCAATATCATGGTTCTAG
AGGCATTGTTCctcaaatgataaaaaatattggCTATTTACAAAACATCG
ATGCCATGCACAAGTCCATTTCTCAAGAATCTACAAGGGAGCTGGCTTCA
GATATAATTAAAAAGCGTTATCCAAACCGAACGAACATTGACAATAACAC
TTTTATGTTTGGTACTATATCCGATACACAACCAATCGAAGCTGTTCAGC
TTCCTAATCGATTTTTTAATGGTGGAGTCCGCTTTTCTCAACGCCTTTGG
TACAAAGGTAACACATATCATAGCTTAAGCTATAAGTTGAAGCGAAATTC
AAACAGCTATTCCGTTGCATATCGTAAGTTCGATAATACCTCTGGCTATG
GTCACGTGCTATTTTATCTCCACTGCTCTGGTGGATGCTACATGGTGATA
AAGGAGATGAAACAATATGGATCAAATTTGTATTCATTGGAACATTATTC
TGGTTGTTTGGGTCCTAGAACAGATGAGTTTATACTAAACGGGTATCTTG
GGAGAGGTTTTGTTCAGTTAGACGAAACAGAACAATACAGTGTATTCCCC
ATAAATTGTTTGATTGGTCGTGTTTTATTGATACCTATAAATGGTAAATT
TTACGGCTCAAACGTTTTGAACAGTTATCAGCAcgattaa Coding sequence (CDS) from alignment at sc0000136_pilon:782104..784343+ >XLOC_042965 ID=XLOC_042965|Name=XLOC_042965|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3720bp|location=Sequence derived from alignment at sc0000136_pilon:782104..784343+ (Clytia hemisphaerica_ch_hm2_pilon)
GACATCAAAACACAGCTGATTAAAATCATTAAAGGACATCAAAACACAGC
TGATTAAAATCATTAAAGggtATTATGATGACATCATTACGTTCATGCAA
AACAGAACAGAAGGCCTTTATGAGGACATTTGCGATGGAGAGGTTTACAA
GAGTCACGATGACCACAATCGCATTACGATGGTCTGGCATATTGATGGAG
CTCctacaatcaaatcaaaatctttgaatgTTTGGCTTATCACTGCATTC
GTTGTCGAGTTACCTATACACAAGCGTTTTTGTGTgcgaaatattttatt
ttgtggCATTTGGTATGGTGAACAAAAgccaaattttgatctgtttcaGC
TTCAATTTGTTCGGGAGGTAAAACAACTGCGTGACATTGGTTTTGCTGTA
AGCATACTTGATgaagacaaatttttttttcttgaaattcaaGCAAGTTT
AGCAGATTTACCTGCAAGAGCTGCATCATTGAGCTTAAAACAGTTTAATG
GAAAGTTCGGATGCCCGGTCTGTTATCATCCTGGATGCCCCAAAGAAGGA
AATCATCTAGTTCGGTTTTATCGTTACCAAGAAAATCCATTCCCTTTGAG
AACAATGGAAGAAAGCATGTCGTTTGCTGAACGCGCTGAGGAGATGGGAA
ATGCATTTTTTGGTTGGAAGGGAAAGTCTGTAGTGCTAGATATCACTGAA
ATACCGTATAAAGTCCCTTTTGATTATATGCACTTGATCCTAGAGGGGGA
ATTAAAacgaaaactttcaaaatttcttttcccaCCGAACGGACTCCTCG
ATCAAGATGGCTTGGATGAAATTAACGGTATCCTAAAACAAATTCACTAC
CCTCACGATTTCTCTAAGAAAATCACCTCTTTGAACATCAAGGTAGTAAA
AAGGGCAAAGGCCGGCGATCTCCAGCTTCTTCTTTTGCACGTTTTGTTAC
CGACTCTTAAAGATCGTATTCCAGACGACTCTTTCTGTCATTTGGGGTTA
CTCGTTACCAGCCTTCAACTCCTAAACCAAGACAGCGCTCGTGAGGAGGA
CATCAAGCTTGCCGAAAATATGTTGATTGAATATCACCGCAATGATCAAA
GGCTTCATGGAGACGAATCTCAAACATTTACCAATCATGCTCTAATCCAC
ATCGCTGACCAGAGGAGAAAACATGGCTGCCCGTTAGTCTTGATTTCAAA
CTTCGTCTTCGAAGGCTTCATTGCAACCCTTTTAAGGCAATATCATGGTT
CTAGAGGCATTGTTCctcaaatgataaaaaatattggCTATTTACAAAAC
ATCGATGCCATGCACAAGTCCATTTCTCAAGAATCTACAAGGGAGCTGGC
TTCAGATATAATTAAAAAGCGTTATCCAAACCGAACGAACATTGACAATA
ACACTTTTATGTTTGGTACTATATCCGATACACAACCAATCGAAGCTGTT
CAGCTTCCTAATCGATTTTTTAATGGTGGAGTCCGCTTTTCTCAACGCCT
TTGGTACAAAGGTAACACATATCATAGCTTAAGCTATAAGTTGAAGCGAA
ATTCAAACAGCTATTCCGTTGCATATCGTAAGTTCGATAATACCTCTGGC
TATGGTCACGTGCTATTTTATCTCCACTGCTCTGGTGGATGCTACATGGT
GATAAAGGAGATGAAACAATATGGATCAAATTTGTATTCATTGGAACATT
ATTCTGGTTGTTTGGGTCCTAGAACAGATGAGTTTATACTAAACGGGTAT
CTTGGGAGAGGTTTTGTTCAGTTAGACGAAACAGAACAATACAGTGTATT
CCCCATAAATTGTTTGATTGGTCGTGTTTTATTGATACCTATAAATGGTA
AATTTTACGGCTCAAACGTTTTGAACAGTTATCAGCAcgattaaggtATT
ATGATGACATCATTACGTTCATGCAAAACAGAACAGAAGGCCTTTATGAG
GACATTTGCGATGGAGAGGTTTACAAGAGTCACGATGACCACAATCGCAT
TACGATGGTCTGGCATATTGATGGAGCTCctacaatcaaatcaaaatctt
tgaatgTTTGGCTTATCACTGCATTCGTTGTCGAGTTACCTATACACAAG
CGTTTTTGTGTgcgaaatattttattttgtggCATTTGGTATGGTGAACA
AAAgccaaattttgatctgtttcaGCTTCAATTTGTTCGGGAGGTAAAAC
AACTGCGTGACATTGGTTTTGCTGTAAGCATACTTGATgaagacaaattt
ttttttcttgaaattcaaGCAAGTTTAGCAGATTTACCTGCAAGAGCTGC
ATCATTGAGCTTAAAACAGTTTAATGGAAAGTTCGGATGCCCGGTCTGTT
ATCATCCTGGATGCCCCAAAGAAGGAAATCATCTAGTTCGGTTTTATCGT
TACCAAGAAAATCCATTCCCTTTGAGAACAATGGAAGAAAGCATGTCGTT
TGCTGAACGCGCTGAGGAGATGGGAAATGCATTTTTTGGTTGGAAGGGAA
AGTCTGTAGTGCTAGATATCACTGAAATACCGTATAAAGTCCCTTTTGAT
TATATGCACTTGATCCTAGAGGGGGAATTAAAacgaaaactttcaaaatt
tcttttcccaCCGAACGGACTCCTCGATCAAGATGGCTTGGATGAAATTA
ACGGTATCCTAAAACAAATTCACTACCCTCACGATTTCTCTAAGAAAATC
ACCTCTTTGAACATCAAGGTAGTAAAAAGGGCAAAGGCCGGCGATCTCCA
GCTTCTTCTTTTGCACGTTTTGTTACCGACTCTTAAAGATCGTATTCCAG
ACGACTCTTTCTGTCATTTGGGGTTACTCGTTACCAGCCTTCAACTCCTA
AACCAAGACAGCGCTCGTGAGGAGGACATCAAGCTTGCCGAAAATATGTT
GATTGAATATCACCGCAATGATCAAAGGCTTCATGGAGACGAATCTCAAA
CATTTACCAATCATGCTCTAATCCACATCGCTGACCAGAGGAGAAAACAT
GGCTGCCCGTTAGTCTTGATTTCAAACTTCGTCTTCGAAGGCTTCATTGC
AACCCTTTTAAGGCAATATCATGGTTCTAGAGGCATTGTTCctcaaatga
taaaaaatattggCTATTTACAAAACATCGATGCCATGCACAAGTCCATT
TCTCAAGAATCTACAAGGGAGCTGGCTTCAGATATAATTAAAAAGCGTTA
TCCAAACCGAACGAACATTGACAATAACACTTTTATGTTTGGTACTATAT
CCGATACACAACCAATCGAAGCTGTTCAGCTTCCTAATCGATTTTTTAAT
GGTGGAGTCCGCTTTTCTCAACGCCTTTGGTACAAAGGTAACACATATCA
TAGCTTAAGCTATAAGTTGAAGCGAAATTCAAACAGCTATTCCGTTGCAT
ATCGTAAGTTCGATAATACCTCTGGCTATGGTCACGTGCTATTTTATCTC
CACTGCTCTGGTGGATGCTACATGGTGATAAAGGAGATGAAACAATATGG
ATCAAATTTGTATTCATTGGAACATTATTCTGGTTGTTTGGGTCCTAGAA
CAGATGAGTTTATACTAAACGGGTATCTTGGGAGAGGTTTTGTTCAGTTA
GACGAAACAGAACAATACAGTGTATTCCCCATAAATTGTTTGATTGGTCG
TGTTTTATTGATACCTATAAATGGTAAATTTTACGGCTCAAACGTTTTGA
ACAGTTATCAGCAcgattaa
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000136_pilon | genome | sc0000136_pilon:782104..784343 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 37-1860:417 |
| Aaloc | 1-33:1 |
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