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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000113_pilon:509157..514302+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_042896 ID=XLOC_042896|Name=XLOC_042896|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5146bp|location=Sequence derived from alignment at sc0000113_pilon:509157..514302+ (Clytia hemisphaerica_ch_hm2_pilon)
atgaaccaTTTTACAAGGTGAGTCCTGATGATATTAATATACAtattatc
ggagtttttgatttttctaaaaaagcgatgcattgtgggattgtttcggg
agtataacaatagaaatctcataggaattcctcgagggaattctattgta
atacccccgaaacaatcccacaaggcatcgctttttttagaaaaatcaaa
aactccgataagatctatttcaATAAGATTAATTTTCACAGGATTAAAAA
CAGTACTTGAATTTCCTTTAGAAAGTTTAATCATAGAAAACCAAAGTgct
ttaaagatattcaaaaaaatttggaggGTTAATACTCGGCAAAATCCAAA
AAGCCAATTGAGTTAAACTAAAAAGGTTAAAATTTCTGGatcaatttttc
agattttttgcagaagCGTGCGCTTGTTGGCCAAGGCCTTTTTTAACCAT
AGCGGGATGAGAGGGTAGGCAGGGCGAcccagtacacgttttttttttgc
gaaactAGTTTTAcaaagcagcctcaatgtttcttaaggagtcggccttt
tgagccttaaatgtttcttacatgtttctaaactgtttgacataatcagc
ctcatggaaggctgcattagaaggttcttaaaagaaacctaattaaaaaa
tgttattttctcattctcagcatcagcatgtttcttagacgtctcttagt
ttttaggcattctgagcctcctcatgtttcttaaaagtgtgtttcttaaa
aaaaaaaaacgtgtacgctatcagttgaaatttttcgattgattcttttt
caggttttgaagcatccttacggtatttcaatgtttttcttttttagatt
gttGGCGTTTCTGTCCGTCTTTGACGTAACGAAAGCTCAGAGTACTTGTG
AAAAAGCCCAGTGTAAAAAGCAGCTCTTCGATTTCCAGGCTATTCATGGT
TCCTTGGTAAAAGTGTCAGACAAGAAATTTGCTTTATGGACGGCCAGTAA
AACACTCTCCCTCACAGGGAGTCAAGAAGAAAGAGAACGTTCTTGTTCGG
AAGATTGTGTAAAAGAAGGAAAAGACGTGTGTAGGAGTGCTCATTTGGAA
TCGTTTCAATCAGAAGATACACCCTCCACCTGTGAGTTGTTCGTGGAAAA
TGTTTATGATCATTTGCCAAGTGTGTTGAGCACAATTCGAACTGATAGCA
CTGGTTGGACTTCTTTTCATGTCTTGGTAAGCATTCAACAGTAGTTTAAA
GggatatatattatttttcttttgtaatcTAACATTTATAAaagcaggct
cagtttttggtacctaaacaatggctctattgtttgagaacaatagaatg
ctaagcataatgcgagcctgatataacGATAGACACTTGCTTAAAAGAAC
ATGTAATCAGATTGTGGGATATTCCAAGAAATGGTCAACCACGATATGTT
TGATTTAACCACCATCTATGGGTACATGGTGCATGGGTCGTAGCGCTATC
CAGTCAAAATGAATTTGGCGATTTGGCGTAACGTGCCCCTCTCCATGGAA
TGGTCGTTGTTTTAGATATTTGGCATAtcaaatgggccattccattttat
atccaaacaggagggtggacgaacatttccaggggtaaTCAGAAAAAATG
CCCAGGGggtataaaaaagtattttttcatgtttccagggggtataaggt
tattccaaaatttccagggggcaaaagactgattttagttcattCACTCT
CACTTTTAagatataaaaataatttttccaatggttcttttgcaaatttt
gaaatttttcagggGGTGTTCACATTTCTATAAATCTTTATTTGCCTTGA
ATAGGTTtgtcccccccccctgtttagaAATtgtatggaacagcccaatc
cGTCTATATATCGTGAGGAAAAGCTCATACCATCTGATTATTATCCCTTT
AACTTAGCTTTGAATTGAATATGAAAATTAGTATTTGAGGATATTAAGCA
AACTAGTCTAATCAATCATGTCAGAGGGTGGGAACATAAAGGcagcgggc
gtttgctagaataggaacTGCGTAGGAGAATGAACAacagttggtgagag
gctgctgattaacaaGGGCTTTCAGCCCTTCccttcttcctacgcttact
acgttcacttttcccgcgtgataccgttccagcctgACTGGCGTGTCAGT
CTACGGAACtggttgattttctttgttctCGTGCGGGACTTATGAAATAG
CgcagttttttttcataacgtcagcctgggtttaggtcccaggtaAAAAT
TAGGTTCCCCCTGAGTTTcaagtccccccaaagatttatgaattttttgt
tagcccccaggacttttgaccctagacactttcaaaaaactgatcCAGTA
AAAAGgggttttccaatgtaaattgcgttcagttctaagtctaagataaa
atattttgcacactttctataaaaaaattgtgccgcattcaaaaaaattt
cagattcacgagcttcaatttgagtaattgaagccaactattaagaTTCA
AAGCAGTTAAAAAAGGTTATACCTCAATTTTACCCAAGAAAATATAAGGG
AGGGTCAAACGATTAagttcaaagcacaaaatatttttctcttaaaGTCT
CTCGAGTTCGCAAAGCATTtagaatgacagattgaatctagtgctttctt
tgttttcactcGGCATATTTTCAGATgagatgaagtttttataagatact
ttaataattggtcatttgaagtaagaAAAATGACGcgctctttagaaaaa
gtaacaaaattgttttattactggttaacaaccaatcaaatcaaataaga
gttTATAAAGTCCATCTCGTCCCcatatttttcaagatttcactTTTAAT
CTGACGTTTGCTTGAAAACCACGCGCTTCATGCGCAATAAGTCAAACACC
TTCCACtagaataatcttttttttaagaattcatTTTGTGAAGATGCACC
AtgtcaaaatattggaaaatgtGTTCCCGATTTTGCGACCAATGAAGGTG
TTTGCGAATGTACCGGTTATTCGGGAAAATTCTGTCAAGATCTTAGTaag
taacccagctggcacacaacgttgttttataacgttcatataacgttata
tggacgttatgaactttggatgaatgttgaaacaatgttttgtGCCAGCT
TTGGGAACCTATTTGCCAAGCCTCGGTTTGTTCATCAGTAGCATGTCACT
GTCTATGGTGCTGTATGTCCGTCTTTGAAGGAACAGCGCTTTTTTAATGA
CCACACGACAAAGACCCTGAAATCTATCCAATATTGAAAAATACATACTT
ACTTCAGTTGAGATCAAAACAGCTTTTTCCAGTTACTGAATATTGCATTT
TTATCGTTTACCAGACCCCTTAGAAGAGGACGGCTCGGTTTATTTCACAT
TCGATGATGGACAAATGAAGAATTTGGGAAGAAGTGGCGATGTTTTAACT
GAAGGAACTGGTGATGGTCTTGTTATGTATGATATAGCACGAAACACAAG
AGTCTTGCAATGCAATCTCACAAACTGTTTCGATTTTGGAGATGACACAA
GTACTACATGCATGAAGTGAGTTTTTGTTATAAACAATAGGGTATTAGGG
TATTGAGCGCTCTCAACCAACTACAGGATGTCCGTaaaaaaaGTATCGAA
TCGAAACACAGCTATAAGTAAAACGTTTTTCAACTGCCTGAAGAGGGCGG
TTTTAACAGTGTAGATGTATAAGTAAAATCtcgtttttaaattgaaataa
atttttgactCACTTATCTCTATGATATAAACACATTACTTTCCTTACAT
CTTATCTGGGTATGAGagcttttaatatttttgtaacgtCCCTTCCTCAA
TATTTATCAGTCAAGAACACgatcaaattagcctatcatagagTAATTAG
ACTACTATTTTAAATAGTATGATTTGccgaaaatcaacaaaaatgtcGAT
TGCTGAAtatcaaagtcagaaaatcggGCATAAAAATGCAAAATGGCGGC
AGTAAGGAAGATGGGTTTGACCagggaaaatggaaaatttgaaattaaca
aaaaaatagaaactgataataaaaatttaattacctTTTTGCCCTGAAGA
TTTTCCACCTCGACTTCTTTTAAACTGGTGTACTTGaagctttatttttc
taaaacaaagACTGGTTTCGGAATGAATTTTTCACCGTAAAAAGCCTTCA
GTTAATCCAAAATTTAAGCTGAAGAAGTTTATTGTTTTTTCGTAAGTCGA
GTTTACTTACTTTAACCCAATTGATCATGCATCGGGAATCTTGTGCAAGG
GGAttgggtaccatcactctgtAGAGACTCCTCTTTGTTATATTACATTA
TCGTGGTTTGGGAAATCTGTTGATTGCCtacttttaaacattgaatatct
gttttgaaatattgaaatgaaTTATAAAAAGCTAGGTGAATTGTCACCAT
ATTAAAATAAATCATAACACACTTTTCTTAGTTTGTGAGATTGCATTGCA
AGACTCTTGTGTTTCGTGCTATATCATATATAGCAAGACCATCGCCAGTT
CCTTCAGTCAAAACATCGCCACTTCTTCCCAAATTTTTTGCATTACAGTA
ATTATTGTATTAAAATTCTATGTATTTTAGAAAGTACACAATGCCATATT
GTGCTGGTGGGATGACACTGGCTTTCTGGGTTCGCCTTTTGCGTGGGGAT
GAAAACAGAGACGGTTTCATGCTGCTTATTGATCAAGGAGCTGGTGATGA
TAATGCTGGTATAGCCATTAATGTCAAGCCTGACAAAACAGAAATAAACA
TCTACATCAAGCTCCTTAACAACCGATTGAAATGTCAATTTACGAATATT
CCCAACGATATTTATCGCCAATGGTTTTTCTTGAGCATGTCTTTCCAAAG
AACGCCTTCAACAAAAATGGTTTGCTTCATGAATGAGGATCGTGTGGAGG
TGACAACATACAGCGCAACTACTTCTAATCCACCCACGTCCAAATTCTTC
CCTGGCGATGAAGGCAAATTCATGTTGGATGATATCCTCTATATTCCCAA
GTTTTCGACTGATGAAATGATTTCAACTTTCTATGATAAAAGTAAG Coding sequence (CDS) from alignment at sc0000113_pilon:509157..514302+ >XLOC_042896 ID=XLOC_042896|Name=XLOC_042896|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2364bp|location=Sequence derived from alignment at sc0000113_pilon:509157..514302+ (Clytia hemisphaerica_ch_hm2_pilon)
atgaaccaTTTTACAAGatgaaccaTTTTACAAGattgttGGCGTTTCTG
TCCGTCTTTGACGTAACGAAAGCTCAGAGTACTTGTGAAAAAGCCCAGTG
TAAAAAGCAGCTCTTCGATTTCCAGGCTATTCATGGTTCCTTGGTAAAAG
TGTCAGACAAGAAATTTGCTTTATGGACGGCCAGTAAAACACTCTCCCTC
ACAGGGAGTCAAGAAGAAAGAGAACGTTCTTGTTCGGAAGATTGTGTAAA
AGAAGGAAAAGACGTGTGTAGGAGTGCTCATTTGGAATCGTTTCAATCAG
AAGATACACCCTCCACCTGTGAGTTGTTCGTGGAAAATGTTTATGATCAT
TTGCCAAGTGTGTTGAGCACAATTCGAACTGATAGCACTGGTTGGACTTC
TTTTCATGTCTTGattgttGGCGTTTCTGTCCGTCTTTGACGTAACGAAA
GCTCAGAGTACTTGTGAAAAAGCCCAGTGTAAAAAGCAGCTCTTCGATTT
CCAGGCTATTCATGGTTCCTTGGTAAAAGTGTCAGACAAGAAATTTGCTT
TATGGACGGCCAGTAAAACACTCTCCCTCACAGGGAGTCAAGAAGAAAGA
GAACGTTCTTGTTCGGAAGATTGTGTAAAAGAAGGAAAAGACGTGTGTAG
GAGTGCTCATTTGGAATCGTTTCAATCAGAAGATACACCCTCCACCTGTG
AGTTGTTCGTGGAAAATGTTTATGATCATTTGCCAAGTGTGTTGAGCACA
ATTCGAACTGATAGCACTGGTTGGACTTCTTTTCATGTCTTGaattcatT
TTGTGAAGATGCACCAtgtcaaaatattggaaaatgtGTTCCCGATTTTG
CGACCAATGAAGGTGTTTGCGAATGTACCGGTTATTCGGGAAAATTCTGT
CAAGATCTTAaattcatTTTGTGAAGATGCACCAtgtcaaaatattggaa
aatgtGTTCCCGATTTTGCGACCAATGAAGGTGTTTGCGAATGTACCGGT
TATTCGGGAAAATTCTGTCAAGATCTTAACCCCTTAGAAGAGGACGGCTC
GGTTTATTTCACATTCGATGATGGACAAATGAAGAATTTGGGAAGAAGTG
GCGATGTTTTAACTGAAGGAACTGGTGATGGTCTTGTTATGTATGATATA
GCACGAAACACAAGAGTCTTGCAATGCAATCTCACAAACTGTTTCGATTT
TGGAGATGACACAAGTACTACATGCATGAAACCCCTTAGAAGAGGACGGC
TCGGTTTATTTCACATTCGATGATGGACAAATGAAGAATTTGGGAAGAAG
TGGCGATGTTTTAACTGAAGGAACTGGTGATGGTCTTGTTATGTATGATA
TAGCACGAAACACAAGAGTCTTGCAATGCAATCTCACAAACTGTTTCGAT
TTTGGAGATGACACAAGTACTACATGCATGAAAAAGTACACAATGCCATA
TTGTGCTGGTGGGATGACACTGGCTTTCTGGGTTCGCCTTTTGCGTGGGG
ATGAAAACAGAGACGGTTTCATGCTGCTTATTGATCAAGGAGCTGGTGAT
GATAATGCTGGTATAGCCATTAATGTCAAGCCTGACAAAACAGAAATAAA
CATCTACATCAAGCTCCTTAACAACCGATTGAAATGTCAATTTACGAATA
TTCCCAACGATATTTATCGCCAATGGTTTTTCTTGAGCATGTCTTTCCAA
AGAACGCCTTCAACAAAAATGGTTTGCTTCATGAATGAGGATCGTGTGGA
GGTGACAACATACAGCGCAACTACTTCTAATCCACCCACGTCCAAATTCT
TCCCTGGCGATGAAGGCAAATTCATGTTGGATGATATCCTCTATATTCCC
AAGTTTTCGACTGATGAAATGATTTCAACTTTCTATGATAAAAGTAAGAA
AGTACACAATGCCATATTGTGCTGGTGGGATGACACTGGCTTTCTGGGTT
CGCCTTTTGCGTGGGGATGAAAACAGAGACGGTTTCATGCTGCTTATTGA
TCAAGGAGCTGGTGATGATAATGCTGGTATAGCCATTAATGTCAAGCCTG
ACAAAACAGAAATAAACATCTACATCAAGCTCCTTAACAACCGATTGAAA
TGTCAATTTACGAATATTCCCAACGATATTTATCGCCAATGGTTTTTCTT
GAGCATGTCTTTCCAAAGAACGCCTTCAACAAAAATGGTTTGCTTCATGA
ATGAGGATCGTGTGGAGGTGACAACATACAGCGCAACTACTTCTAATCCA
CCCACGTCCAAATTCTTCCCTGGCGATGAAGGCAAATTCATGTTGGATGA
TATCCTCTATATTCCCAAGTTTTCGACTGATGAAATGATTTCAACTTTCT
ATGATAAAAGTAAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000113_pilon | genome | sc0000113_pilon:509157..514302 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 718-1182:4682 |
| Aaloc | 517-714:3417 |
| Aaloc | 397-513:2978 |
| Aaloc | 19-396:849 |
| Aaloc | 1-15:1 |
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