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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000246_pilon:123934..129528- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_042872 ID=XLOC_042872|Name=XLOC_042872|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5595bp|location=Sequence derived from alignment at sc0000246_pilon:123934..129528- (Clytia hemisphaerica_ch_hm2_pilon)
TTCATTTCAGCTTTTTACAGTCGAGGTAAAACTCATATAATCAGACTGGC
AAGTATCATAGAAGTCATGAATACCGAAATGGCAAACCATGACCTCAATA
TGAGGAATGCAAATGAAGAAGAAAATCAAGATCAAGAAATGAGAGATGTT
GAGGACATCCAAGAGCAAGTGGATTTGCAAGAAGAAGACCTCGAAAGACA
GCCGGTAAACTTTTGCTTTTAGATATCCATTTGTATTGGGCTATTGCTTA
CTCTTATGTGCCAAATAAACGCCCCCCCCCCCGGACCTTATAAGGACCCC
CCACCGTTTACTAATTCTTAAGAATATTTTCAGCTGTCAAAGAGAAGGCC
CCTTATTTTGCTCTTAATAGCCTGATTTTAGCCTATCTTTACCTTATTTT
TGGGGTTTCAGAAGTACAATTTCCAACACCACCGGCAATTAGGTTTCCCC
CGTTTATTAAAATTTCGATTTTTCCACCCCCCCCGCATTTATTTGTCACC
TAAGAGTACATGGTTATCACCACCTTTCCTTGTTATTGGTATTAAAAATA
TATTTTCTAAGATTTCCAGAAACCTAAACATGTTTCGGTATCTTTGAAAT
CAGAAAACTCATGGATACTCCTCCCCAGGAGGAGGCATGAAATGATGTTT
TGAGTTATAAATATAAGCAGATATAAGCAAATGGAAATGTCCAGTGTAAA
TTAACTATGAATTACAATAATAATGAATTTCAAAACGTATTACATGAATT
ATAATTTTAGGTGCATTATTCTTACATCATCAGCAAGCAAAGCATGGAAC
TTGCTATAGAGCTAGTGGTTGCCTCTTTGAAACAAGTTGGTAAGTCAATA
CTCATAATACTCAATACAAAGAGGGTAAAAAACATCATCTTATAAGGAGT
TAGACATTCTATAAGGTTACTAATATATCAATTTCGGTAACAGCCAGCAC
ACTGTCAGAATTCAACCAGATTCAACTAGGTATTTTTATAAATAAATCTG
AGTTTATAGATCCAATGAAATTCATACTGGAAGTTTTATTTTGTATTATG
TTTTGACCCTTTCAGGGTTGATATACGGAAACGGAGCTGACCAGAATGCC
GGTGAAGATAAAATTCTGTCAAAGAGGCTCATTCTTCTGCTACCAGGGAA
GTTTTTGTCGACCAGGATCCTCATAGCAAACAAGACACTTGCCAAATTTA
AAGGTGTCCATTCAACCATGGCTATTTTCACAAAAGCTGTAATAAATGAA
CTTGTTGACGAAGGCTTTGGGACAATACAAGAGAGAAGGGCATATAATCA
TCTTCCAGTAAGTGAATTTTCATATGCAGTTTGCTTTATGAAAAACCTTG
GGCCAGACTAGAGACTTTCGTATTGTTGGATATTATAAAGACACTTGGGT
TTGGCATAGATTTTACATCATATTAGCTCCTCAGGGATAGCAAGTAAAAC
ATATCAAAGGGGTTATCCTGAGAAAATTGGTTTAGTCGTTTCCATGGGTA
ACCAAGAGTTGGTTTTGAATTTGTTTTGACGGAAGCGAAGCGAACGAGAA
AAAAATTTCGATGTAGAGCTTTGACTCAAAGTTAAGTAAAACTGAAGGTA
TGGGGTACTGAAACTACACGCTAAAGAGCAGATAGTAAAGAATATTTCTT
CTTTTTAAGCCCTTCCGCTTCCGAGGCATCTACAAGATAGGCAGGCGCAA
GGTCATAAGATAATATTGTCATTACTGGGCAATTTACTACCTTGCCGTGG
AAAACGCTTCACATTTCCTAGCTAATTTCATATCTAGGAAATTCGTACAT
TTTACTTTTGAAAAAAATCGAATGTCGCTTGCTAGGAATTTTATTTTTCC
CCTGTGTTAAAAGTCTTAATAATTCATGTGTATTTTATTTCAGATATTTT
ACATGACAAAAACAAAACCAGAGGAGGTAACACAAGAGGCATTAGAAATT
CTTGGTGTGGCAGAAGACGAGTACCGTCAGAATTATGACAAGGAAAATGA
AGAAAGGTAAGCTAAAATTCAAACTCGAAGCACTTTAAAAATTTACAATA
GAGGAACACTTGTAAGCGGAATTAATTATTAGTGGGAAAAGAAATGAAAA
ATGAAAACAAAATGCCCTGAAAATACTATTTTGTACGAAAATAACAAACA
TGGGTAAAAAATCTAATTGGCGTACACGCTTTTTTTTTTATAAGAATGGT
GTTTTTTCATTTCATCATGGATATTCTTAACTTTTTGGCGAAAATCATCC
AAAAATATTCTTACGGTATTCTTAGGTTAAGATCGAAATTGGCAATCTAC
AGGTTAAAATGCATTAAAAATGGCATTCTTACGTTCAGTTGCTAAATTCC
ACGATGGCGATATTCTTACCATATTCTTAATTTTTTGGCCATTTTCATCA
TGGACATTCTTATAAAGTGTATTCTTATAAAAAAAAAAGCGTGTATTCAT
AAAACTATATTTCAAATTAGTTGTCAGTAAAATTTGAAATGCCCATAACT
TTTGTAGTGTGGTCGTGTTACAAAAATACAGGCTGATTTTAGGAAAAAAT
CAGATCTAGCTGAAACTTTCTCCAGGCCTTCTCTACAGGGTGCTTATACC
TCAGGAAAAAATCCCCTGAAATCCCACTGGTGGAACATCCCCTTTTTGGG
CAATTTCTATTTTCCCCAGGCGAAATCCTAAGGGCGAAATTTTTTGAAAA
TTTTAAACTTATTTCCAGACAATATCATATAAACCATTCAAAAGCTCTCG
AAAATCTATATAGAAGACTTTTAAACGGTTAAAGCCGATTTCCTTAGCTA
GCTCGAGATATTTTATGCGCAAGTTCCACTTCTCGCCACATTTTGGTCTA
AAATTGGCCATATATAGCATCTTCTGCGTGAAATATCTCGAGTTAGGTAA
TGAAATCGGCTATACCTTTTTAAAAGTCTTCTATATAGCTTTTCGAGAAC
TTTCGAATGGTATACTTGATAATGTCTGAAAATGAGTTTGAAATTTTCAA
AAAAATTCCGCCCTTAGGGTTTTGCCTGGGGAAAAAAGAAATGCCCCAAA
AAAGGGATGTTCCACCAGTGGGATTTTAGGGGATTTTTTCCTGAGGCATA
ACCATCCTATAGAGAAAGTCTGGAGAAAGTTTCAGCTAAAGTCTATTCAC
GATAAATGTGCACTCTTTTTGGGACCTACCCCGGTGGGGTGGAGGTCCTA
TAAATTAACCTTTGTCTGTTCGTCCGTTCGTTCGTTCGTTCGTTATTAGC
TTTCCTCGTGATTGGCTCATTAGTTTTTTCTGATTTTTTGCACTAAGATG
TGTAACTATAAACCCTCGAATGTGACGGAGCCCGATTTTCGAAAAAAAAA
TTTTTTGGCCAAAAAACGGCTAAAAAAGGGTTTTTTTGGACTTTGGGAAA
TATTGGATCATTGTTTTTTTTCTGATTTTTGACATGAAAGTAGGGTGCCA
TCATAGGTAAAAGATGGCTCAAGCAGATTTTTTCAAAAAAATTTTGTTGG
CTCAAAAAACGCATGTTTATCTATAAGAATCACTATTAATAAGCATACAT
CAATGTTCTTAGCCAAATTACTCAATTTTTTGATGAAATAGATGTTTTTT
TTTGCTCATGAGGGCTTACTTTTGAAGAATTGTGTGTGTTTAGACATGAA
ATTTTGGTTTCTTGGCGTGTTTTTATAAAAACTGATAGAAAAATTCGATA
TTTATTTATAAGCACATTATCAATTACTTAGGTATTAGCTTTTCTCGAGA
TTGGCTCTTTGATTCTTTATGAATTTTTTGCACAAAGATGCATAACTATA
AACCCTCGCATGTGAAGGAGCCCGACTTTCGAAAAAAAAATTTTGCTCAC
AAATTTTGAATATGAAAGAATATTTCAAGAGCATGAAATTTTGGTTTCTA
AACGTTTTTTTATAAGAAACAAACGACTAATTTTGATAGATCGTCACTAT
TTGTGTTCTGAATGATTGTTAATGGTCACGCTCACGTAGATATCAATTAT
ATATGTGTTAAATGCATAAATAGATAGGTCCATAAAAGTATCACTTGTTT
CTTTTAACCTTGTAACTTTTGAAGGAATTCTTCGATCTTTATAAATATGG
TATCGTCGGAAAGAAATTAGCGAGTGGAACAATTCGAAATAAAAAAATGA
TTAAAAACATTCTAAAAATGAAGATGAAAATGAAGAAGAAAAAAATGAAG
ATCTTTAACTATCAATTTCACTGAAATTCATCCTTTCCCATCGAACGTCA
TCACTGTGAAAAAATTTCTTAAAAATAATCATTCAGTCAAAAGATATCAG
ACAAAGTTGTAAGCTGGTTGACGTCTAAAAACGTTGTTTTCTGCTGTTTT
TTTGGGGTCAATCACTTATCAACTTTGCATTATAACTTTATATTGAATAA
ATGTTTCAGTGAAATTTCTTCACAGCGATGACCTCCTAAGATAAAAGAAT
CTCTCCAGTGAAAATGAAAGTTTTAGCACTTTTCTGAGATTTTAATTTTT
TTCTTCTTCATTTTGATCTTCGTTTTTAGAATTTTATTAAAGACTTTTTT
AATTCAAATTGTTTCACTCACAAATATCTCTCCAATGATACCATAGCAAT
TCTATGCGCACTGAAAAGATAAACCTGAGTGGGGTTTCTTCTTTATAAGT
ATTGCACTTAATAAGCATATCTAGACTTAGATATGGCAAAATTTAAGCAT
ATGCTAATCATTAGCAGGGCCTAAATTTCCGATTTTGGCTGTTTTTGGGT
TGAATTTTGAGTGGGAATTTCCCTAAAAATTTGACCAGGATATAAGCACC
CTTCAAGTATCAGCTATGTCAATCTCTCGATGTAAGCATGTCCGAGTTAG
TTTTTTGATTTTTGTATGCTTATACAATATGCTTTTGCATTATCCCTATA
AAACTCTGAAAACTTTTTGAAAACTTTGATGAACAATGAAAAAAAATTCC
GGTAGAATTGTGATACCGTTTTTACAGGAATGATTCTTAAATCTTAAAAA
CTCGTTCCAGTGAAAAAATTTCAAAAATATTCATTCAATCAAAAGAAAAG
AGATTTGACAAACTTTATTACTGATTGAGTCTAGCCTTTTTTAAAGTCAA
CTAGCTGTAGACTTTCTGTCATAATTCTTTTTACCTATATTTTACCAGAT
GTTGATTCTCTCCTTTTAAGTTTTCATGTTTATTTTCAAAATATTTCAGA
GCTTTATTAATGGGATATCCCACTCTCGATCATTTATCCAATGCACATTT
ATAACTGTTTATTGTCTTCTTTTGATATATCAAAAGTTTTGAGCCTTTCA
GGTTTTACTGACATATAATTCAAATTCACTTTATATCAATAGTCTAATAG
CTAATCAGACATTTCAAATTTGATGCAATTCCTTTTAAATTAAAAACTTC
GTCTTCTTTTTCAGTGCTGCTCATCAAAATTGCTTCAGAAATTCACGCAA
CCCTCGAAAAAGAGCTGCAGAAGAGGCTCCAGCGCAAGAAGAGACTCGAT
CGCAAGAAGAGACTCGATCGCAAGAAGAGACTCGATCGCAAGAAGAGACT
CGATCGCAAGAAGAGACTCGATCGCAGGAGGAATCACAGCATTAG Coding sequence (CDS) from alignment at sc0000246_pilon:123934..129528- >XLOC_042872 ID=XLOC_042872|Name=XLOC_042872|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1638bp|location=Sequence derived from alignment at sc0000246_pilon:123934..129528- (Clytia hemisphaerica_ch_hm2_pilon)
TTCATTTCAGCTTTTTACAGTCGAGGTAAAACTCATATAATCAGACTGGC
AAGTATCATAGAAGTCATGAATACCGAAATGGCAAACCATGACCTCAATA
TGAGGAATGCAAATGAAGAAGAAAATCAAGATCAAGAAATGAGAGATGTT
GAGGACATCCAAGAGCAAGTGGATTTGCAAGAAGAAGACCTCGAAAGACA
GCCGTTCATTTCAGCTTTTTACAGTCGAGGTAAAACTCATATAATCAGAC
TGGCAAGTATCATAGAAGTCATGAATACCGAAATGGCAAACCATGACCTC
AATATGAGGAATGCAAATGAAGAAGAAAATCAAGATCAAGAAATGAGAGA
TGTTGAGGACATCCAAGAGCAAGTGGATTTGCAAGAAGAAGACCTCGAAA
GACAGCCGGTGCATTATTCTTACATCATCAGCAAGCAAAGCATGGAACTT
GCTATAGAGCTAGTGGTTGCCTCTTTGAAACAAGTTGGTGCATTATTCTT
ACATCATCAGCAAGCAAAGCATGGAACTTGCTATAGAGCTAGTGGTTGCC
TCTTTGAAACAAGTTGGGTTGATATACGGAAACGGAGCTGACCAGAATGC
CGGTGAAGATAAAATTCTGTCAAAGAGGCTCATTCTTCTGCTACCAGGGA
AGTTTTTGTCGACCAGGATCCTCATAGCAAACAAGACACTTGCCAAATTT
AAAGGTGTCCATTCAACCATGGCTATTTTCACAAAAGCTGTAATAAATGA
ACTTGTTGACGAAGGCTTTGGGACAATACAAGAGAGAAGGGCATATAATC
ATCTTCCAGGTTGATATACGGAAACGGAGCTGACCAGAATGCCGGTGAAG
ATAAAATTCTGTCAAAGAGGCTCATTCTTCTGCTACCAGGGAAGTTTTTG
TCGACCAGGATCCTCATAGCAAACAAGACACTTGCCAAATTTAAAGGTGT
CCATTCAACCATGGCTATTTTCACAAAAGCTGTAATAAATGAACTTGTTG
ACGAAGGCTTTGGGACAATACAAGAGAGAAGGGCATATAATCATCTTCCA
ATATTTTACATGACAAAAACAAAACCAGAGGAGGTAACACAAGAGGCATT
AGAAATTCTTGGTGTGGCAGAAGACGAGTACCGTCAGAATTATGACAAGG
AAAATGAAGAAAGATATTTTACATGACAAAAACAAAACCAGAGGAGGTAA
CACAAGAGGCATTAGAAATTCTTGGTGTGGCAGAAGACGAGTACCGTCAG
AATTATGACAAGGAAAATGAAGAAAGTGCTGCTCATCAAAATTGCTTCAG
AAATTCACGCAACCCTCGAAAAAGAGCTGCAGAAGAGGCTCCAGCGCAAG
AAGAGACTCGATCGCAAGAAGAGACTCGATCGCAAGAAGAGACTCGATCG
CAAGAAGAGACTCGATCGCAAGAAGAGACTCGATCGCAGGAGGAATCACA
GCATTAGTGCTGCTCATCAAAATTGCTTCAGAAATTCACGCAACCCTCGA
AAAAGAGCTGCAGAAGAGGCTCCAGCGCAAGAAGAGACTCGATCGCAAGA
AGAGACTCGATCGCAAGAAGAGACTCGATCGCAAGAAGAGACTCGATCGC
AAGAAGAGACTCGATCGCAGGAGGAATCACAGCATTAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000246_pilon | genome | sc0000246_pilon:123934..129528 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 640-819:181 |
| Aaloc | 526-636:3703 |
| Aaloc | 286-525:4529 |
| Aaloc | 205-282:4836 |
| Aaloc | 1-204:5596 |
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