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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000375_pilon:230094..233092- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_042663 ID=XLOC_042663|Name=XLOC_042663|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2999bp|location=Sequence derived from alignment at sc0000375_pilon:230094..233092- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTCTATTATATATAGCAAGACATTGACAATGATGCATTTTGGTCTTTG
CTTTTCAGAGACTTTCGGAGTGTCTGGTCAATTTACAATCAAAAAGCCAT
TTGTCAATGATGCGCCGTTATCACAAAAAGACCTTGATGATAAAACGTCT
GACACTTACAAGTTCATGGTTCAAACTTTGAAAAACAAGGTATGTATAAA
ATACATACTTCAAAAATGCACAGGAGTTTCAGGAATGTCTGATTTGATAA
AGCCACCCACCTCCACCGCCAAATACTTATCATTTTCTGTTCAATAAAAA
CCGATTGATAGTCTGATACAGGCTATATTCGATAAGTTGATTTCCAACGT
CCTACTAGTATCAGGTTACAAAACACTCTTCGATTCGTCATTTTTCTAGG
GTAATAATACAATAGTTAGCGACACGTTAAATTTTTGAGCCATGCCTTAA
ATAAGATTTGGAGATTTTAAAGAAAATACTGTTATGTGTTCTTCTATTGG
ATGTTCTGACATTCTTTTGTAGCAAAGATATTCGGAACTGCGTTTCCTTT
GCAGTAAGACTTGAACAACCTAAATAGTCTAAGCCTCAGCCATTACTTAC
TTGTTCTCATAAAAAAACGCTCATGATAGTTTGTTATTGAATAATTTATT
GATTGATATGTTTCTCTTAGATCATGACGTCCTTGAAAAACGAAGAAAAG
AAGATTTCAAGAATCGAGATTACAAAACTGACGTAAGTCGAGTTAATTTC
CACCTTACAGTCCCCTGCTAGGGTCTGCGACCTGTCGGACTAAGTGGAGC
CCCTTCCAATTCGCAACGATTTACTAAAAATAATCTCTAGAAGCATCACT
ACTACCCTACTTGCTTTTGTGAGCTGGAAACGGGAAATTGATAAATTTTC
GACTTATGGAAAATTTGATGTGTATAGACTTGATGGAAATATCTTTCAAA
TTTCTTTCTTCCTACAGTATTGGAAGCCTTGTGGTGGATTACGAAATTTA
CGGTACCGATACATTGAATAATGAAACTTTGAATGAAGGAATTAAGAAAT
CATTTTCTGACGATTCGAATCTTCAAACATCAACTGATACTCACTCTTTC
TCTGGTACTATCGATCCTCAAAGCCAACAGTTAAACGGTAAGGTTAGATA
GATATGCCCTCCGATGCATCGGAATGGGTCCTACCCACGGTGGAGTAGGA
ATCACAGCGCAAGCAGACATTGTAACCCTGCAGATGCGAGCTGCCGAGCC
ATGGTGTATACCACGACACTCGAACTACACGGGAGAACGGATGTCCTCGC
AGGTGTAGAACCTCCTAAGTGTCTCGGCACACCACAATGTCTGGAATATC
TACCCATACTCTTGTTTCAGAGTTATGGTACCCAATTCCCCTCACATGGC
ATGGGTTGACCCGGGCGAAGGAGCATTCACTTGCCAAGTGAATCGTAGTG
CTACGGTGGGTATTGAACTCGAGCCTCCTGGACAGAAGTCAAGCACGATA
ACCACTACACCACTACGCCTACGCCTCATGAAAAAATACCCGTTCATCAT
ATAATTTTATCAACCAAGGTTATGCCAGCTGGCACACAACGTCGTTTTAA
CGTTCACAACGTCCATATAACGTTAGATGAACGTTGAGACAACCTCGTGT
GCCAGCCGGGATGCCAAATGAGTATGAGGATGTCTTCACAGGGTCCATTT
TTCGAGAAATCACCCAGTACAATCTCTACAGACGATAAGGGTGGTTGTAC
CGCCTCCAAGCACCACCATAACCCAACCACAGGGGTTTTCAATTTTCCAT
TTTTCATTTTTGTTCTTTAGATTTTACTAAAAGACTGCATCTCTACAACC
AAATTTTGTTAATATTTTCAGCCATTGATAATTGCGCGTCTGAGCCTTGT
CATACAAATGCTACATGTACAAACAACGTTGAAAAGAATACTTTCTCTTG
TGAGTGTGACCAAGGATTTGAAGGTGATGGTTTCACGTGCTCAAGAATCA
TTGAACGAGTTGTACACAACGTTAAATTGAAAGATGACTGTAAGTATGAT
TAGTGAAATTCTACTCTCCTCTTGAAACCAGTGTACAAAGTTTTTCCGTC
TCCGACGGATTTTCGTCTCAGTGAGGTGCAAAAAGAGACTTTTCCGTCTC
CAAATTCAACAAAATTCTGCAAAACATGAAGATACGGAATTAGTGCCATT
CAGATTCTCCTTTAATTTTTTAACGACGAAACTAAAAAATTGACAACGAA
AATAAAAATTGACTATGATGTGAAGTCCGAAGACATTGCAATAGTGGTGC
ATTTCATGAATAACATTAATTGAACGTTAAAACAACGTTGAAACAACGTT
GTTTGCCAGCTAAGTGAGTACACTGAGTTACGGATCAACTTTGAAATAAT
TATTACCTTCAAACCTTTCATATTTTCAGGGTCAGACGATTCGATCATCA
TCGTAGCAGTGTTGTTCTCCCTTTGTTTTGTTGTGATTGTTATCTTGGCT
TTCTGTCTTTGTTGTTCCAAGTAAGTGCATTATGCCAACTTTCTTTGTGT
TTTTCGATAGTAAATTGCTTTTGTGTCGCCCAAAGGTTGAAGATTCATTG
CTAAATTACTTAACGAATGTCTAAATTTCTGAAAGTTTTCGAATTTTGGA
GTACCTAATTTTCAATTTTTTTCGTGAAAGTATTGATTGCTTATTATACC
TTTGTCAAAAAATTTTTCTCGAAATCCTTTTAAAATTGTTCGATTATTTT
CTCTTTGTAAGATAAACGCCTTTTTTACAAAACTTTTTTATTTTATTTTC
TAGACGAAGTCAAAGCAAATCACAAAAGAAGAACGAATTTTCGAATTACT
ATTCAACTGACGTTCCCACAAAAGAAAAAGTGCCGGAAACCGAACTCATG
AACAATGTTTACATCAATGATGATGTCAATGGGAATAATTCTACGGTAAC
CGATCCTAACAATCCAAAATATCAAAACATTCGCCAAAACATGGTATAA Coding sequence (CDS) from alignment at sc0000375_pilon:230094..233092- >XLOC_042663 ID=XLOC_042663|Name=XLOC_042663|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1752bp|location=Sequence derived from alignment at sc0000375_pilon:230094..233092- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTCTATTATATATAGCAAGACATTGACAATGATGCATTTTGGTCTTTG
CTTTTCAGAGACTTTCGGAGTGTCTGGTCAATTTACAATCAAAAAGCCAT
TTGTCAATGATGCGCCGTTATCACAAAAAGACCTTGATGATAAAACGTCT
GACACTTACAAGTTCATGGTTCAAACTTTGAAAAACAAGATGTCTATTAT
ATATAGCAAGACATTGACAATGATGCATTTTGGTCTTTGCTTTTCAGAGA
CTTTCGGAGTGTCTGGTCAATTTACAATCAAAAAGCCATTTGTCAATGAT
GCGCCGTTATCACAAAAAGACCTTGATGATAAAACGTCTGACACTTACAA
GTTCATGGTTCAAACTTTGAAAAACAAGATCATGACGTCCTTGAAAAACG
AAGAAAAGAAGATTTCAAGAATCGAGATTACAAAACTGACATCATGACGT
CCTTGAAAAACGAAGAAAAGAAGATTTCAAGAATCGAGATTACAAAACTG
ACTATTGGAAGCCTTGTGGTGGATTACGAAATTTACGGTACCGATACATT
GAATAATGAAACTTTGAATGAAGGAATTAAGAAATCATTTTCTGACGATT
CGAATCTTCAAACATCAACTGATACTCACTCTTTCTCTGGTACTATCGAT
CCTCAAAGCCAACAGTTAAACGTATTGGAAGCCTTGTGGTGGATTACGAA
ATTTACGGTACCGATACATTGAATAATGAAACTTTGAATGAAGGAATTAA
GAAATCATTTTCTGACGATTCGAATCTTCAAACATCAACTGATACTCACT
CTTTCTCTGGTACTATCGATCCTCAAAGCCAACAGTTAAACGCCATTGAT
AATTGCGCGTCTGAGCCTTGTCATACAAATGCTACATGTACAAACAACGT
TGAAAAGAATACTTTCTCTTGTGAGTGTGACCAAGGATTTGAAGGTGATG
GTTTCACGTGCTCAAGAATCATTGAACGAGTTGTACACAACGTTAAATTG
AAAGATGACTCCATTGATAATTGCGCGTCTGAGCCTTGTCATACAAATGC
TACATGTACAAACAACGTTGAAAAGAATACTTTCTCTTGTGAGTGTGACC
AAGGATTTGAAGGTGATGGTTTCACGTGCTCAAGAATCATTGAACGAGTT
GTACACAACGTTAAATTGAAAGATGACTGGTCAGACGATTCGATCATCAT
CGTAGCAGTGTTGTTCTCCCTTTGTTTTGTTGTGATTGTTATCTTGGCTT
TCTGTCTTTGTTGTTCCAAGGTCAGACGATTCGATCATCATCGTAGCAGT
GTTGTTCTCCCTTTGTTTTGTTGTGATTGTTATCTTGGCTTTCTGTCTTT
GTTGTTCCAAACGAAGTCAAAGCAAATCACAAAAGAAGAACGAATTTTCG
AATTACTATTCAACTGACGTTCCCACAAAAGAAAAAGTGCCGGAAACCGA
ACTCATGAACAATGTTTACATCAATGATGATGTCAATGGGAATAATTCTA
CGGTAACCGATCCTAACAATCCAAAATATCAAAACATTCGCCAAAACATG
GTATAAACGAAGTCAAAGCAAATCACAAAAGAAGAACGAATTTTCGAATT
ACTATTCAACTGACGTTCCCACAAAAGAAAAAGTGCCGGAAACCGAACTC
ATGAACAATGTTTACATCAATGATGATGTCAATGGGAATAATTCTACGGT
AACCGATCCTAACAATCCAAAATATCAAAACATTCGCCAAAACATGGTAT
AA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000375_pilon | genome | sc0000375_pilon:230094..233092 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 682-876:196 |
| Aaloc | 592-678:569 |
| Aaloc | 424-588:1127 |
| Aaloc | 253-420:2032 |
| Aaloc | 190-249:2330 |
| Aaloc | 1-189:3000 |
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